RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 ACKR2O00590 384 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 RIOK3O14730 519 aaKnown RBP11.07□□□□□ -0.64
HDAC3-210ENST00000490808 OGTO15294 1046 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 B4GALT4O60513 344 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 TIMP1P01033 207 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 ACTN1P12814 892 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 TNNI1P19237 187 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 GCLMP48507 274 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 GPC3P51654 580 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 JAM2P57087 298 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 PTENP60484 403 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 IRX5P78411 483 aaPredicted RBP11.07□□□□□ -0.64
HDAC3-210ENST00000490808 PRPF4BQ13523 1007 aaKnown RBP11.07□□□□□ -0.64
HDAC3-210ENST00000490808 DRAP1Q14919 205 aaPredicted RBP11.07□□□□□ -0.64
HDAC3-210ENST00000490808 GRIK4Q16099 956 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 FAM187BQ17R55 369 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 CBWD6Q4V339 395 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 EPC2Q52LR7 807 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 CBWD3Q5JTY5 395 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 CBWD5Q5RIA9 395 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 SRGAP1Q7Z6B7 1085 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 ZNF410Q86VK4 478 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 TRIM50Q86XT4 487 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 CBWD2Q8IUF1 395 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 TMEM199Q8N511 208 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 UBE2Q2Q8WVN8 375 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 LMBR1Q8WVP7 490 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 CCDC127Q96BQ5 260 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 NAPGQ99747 312 aaPredicted RBP11.07□□□□□ -0.64
HDAC3-210ENST00000490808 RNPEPQ9H4A4 650 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 PRDM6Q9NQX0 595 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 RAB20Q9NX57 234 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 RBAKQ9NYW8 714 aaPredicted RBP11.07□□□□□ -0.64
HDAC3-210ENST00000490808 INTUQ9ULD6 942 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 AKT3Q9Y243 479 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 SQORQ9Y6N5 450 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 LTBP2Q14767 1821 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 ADGRA3Q8IWK6 1321 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 SMIM35A0A1B0GVV1 85 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 ANO9A1A5B4 782 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 LRRIQ3A6PVS8 624 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-210ENST00000490808 ZBTB42B2RXF5 422 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 PJA2O43164 708 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 PHACTR2O75167 634 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 IL18RAPO95256 599 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 C22orf31O95567 290 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 DLATP10515 647 aaKnown RBP11.06□□□□□ -0.64
HDAC3-210ENST00000490808 RAG1P15918 1043 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 TNFAIP3P21580 790 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 NAP1L1P55209 391 aaKnown RBP11.06□□□□□ -0.64
HDAC3-210ENST00000490808 BPIFB4P59827 614 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 IGBP1P78318 339 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 CLDN10P78369 228 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 ARID5AQ03989 594 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 HGSNATQ68CP4 663 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 IQCEQ6IPM2 695 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 GDF6Q6KF10 455 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-210ENST00000490808 MFSD5Q6N075 450 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 SLC39A4Q6P5W5 647 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 MTHFD1LQ6UB35 978 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 TSHZ1Q6ZSZ6 1077 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 TAS1R3Q7RTX0 852 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 IFNLR1Q8IU57 520 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-210ENST00000490808 RPUSD2Q8IZ73 545 aaKnown RBP11.06□□□□□ -0.64
HDAC3-210ENST00000490808 LRRC71Q8N4P6 559 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 CEP112Q8N8E3 955 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 DHX38Q92620 1227 aaKnown RBP11.06□□□□□ -0.64
HDAC3-210ENST00000490808 NLRP4Q96MN2 994 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 SCLT1Q96NL6 688 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 ACO2Q99798 780 aaKnown RBP11.06□□□□□ -0.64
HDAC3-210ENST00000490808 ADPGKQ9BRR6 497 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 TARS2Q9BW92 718 aaKnown RBP11.06□□□□□ -0.64
HDAC3-210ENST00000490808 TMEM117Q9H0C3 514 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 IKZF4Q9H2S9 585 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 HIPK3Q9H422 1215 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 L2HGDHQ9H9P8 463 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 SIX2Q9NPC8 291 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 UBE2TQ9NPD8 197 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-210ENST00000490808 C1orf112Q9NSG2 853 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 ANKFY1Q9P2R3 1169 aa11.06□□□□□ -0.64
HDAC3-210ENST00000490808 BTNL10A8MVZ5 291 aa11.05□□□□□ -0.64
HDAC3-210ENST00000490808 TISP43B9A030 160 aa11.05□□□□□ -0.64
HDAC3-210ENST00000490808 F8VZ95 297 aa11.05□□□□□ -0.64
HDAC3-210ENST00000490808 M0QZ92 97 aa11.05□□□□□ -0.64
HDAC3-210ENST00000490808 EFCAB14O75071 495 aa11.05□□□□□ -0.64
HDAC3-210ENST00000490808 ERLIN2O94905 339 aa11.05□□□□□ -0.64
HDAC3-210ENST00000490808 ADRB2P07550 413 aa11.05□□□□□ -0.64
HDAC3-210ENST00000490808 TBXAS1P24557 533 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-210ENST00000490808 DLG4P78352 724 aa11.05□□□□□ -0.64
HDAC3-210ENST00000490808 GCNT1Q02742 428 aa11.05□□□□□ -0.64
HDAC3-210ENST00000490808 MCL1Q07820 350 aa11.05□□□□□ -0.64
HDAC3-210ENST00000490808 PPP3CAQ08209 521 aa11.05□□□□□ -0.64
HDAC3-210ENST00000490808 PPIGQ13427 754 aaKnown RBP eCLIP11.05□□□□□ -0.641e-6■■□□□ 13.3
HDAC3-210ENST00000490808 NAB2Q15742 525 aa11.05□□□□□ -0.64
HDAC3-210ENST00000490808 ASTE1Q2TB18 679 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-210ENST00000490808 ATF7IP2Q5U623 682 aa11.05□□□□□ -0.64
HDAC3-210ENST00000490808 PPP1R2P3Q6NXS1 205 aa11.05□□□□□ -0.64
HDAC3-210ENST00000490808 MPZL3Q6UWV2 235 aa11.05□□□□□ -0.64
HDAC3-210ENST00000490808 IRF2BP2Q7Z5L9 587 aa11.05□□□□□ -0.64
HDAC3-210ENST00000490808 USP38Q8NB14 1042 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms