RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 FAM189BP81408 668 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 MYL7Q01449 175 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 GRIK3Q13003 919 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 TRPC3Q13507 836 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 GPNMBQ14956 572 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 VWA3BQ502W6 1294 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 ZBTB41Q5SVQ8 909 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 CRELD2Q6UXH1 353 aaPredicted RBP11.85□□□□□ -0.51
VARS2-210ENST00000490699 TRIM59Q8IWR1 403 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 PARD3BQ8TEW8 1205 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 LPPQ93052 612 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 PCMTD1Q96MG8 357 aaPredicted RBP11.85□□□□□ -0.51
VARS2-210ENST00000490699 OSBPL7Q9BZF2 842 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 TMEM117Q9H0C3 514 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 RBSNQ9H1K0 784 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 MMRN2Q9H8L6 949 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 PDE11AQ9HCR9 933 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 TAB2Q9NYJ8 693 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 KLK14Q9P0G3 267 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 CNTN3Q9P232 1028 aa11.85□□□□□ -0.51
VARS2-210ENST00000490699 LIMA1Q9UHB6 759 aaKnown RBP11.85□□□□□ -0.51
VARS2-210ENST00000490699 TTC26A0AVF1 554 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 ARL5CA6NH57 179 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 P4HA2O15460 535 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 KCNE1P15382 129 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 ZNF18P17022 549 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 ATF7P17544 494 aaPredicted RBP11.84□□□□□ -0.51
VARS2-210ENST00000490699 PIK3CAP42336 1068 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 MAGEA10P43363 369 aaPredicted RBP11.84□□□□□ -0.51
VARS2-210ENST00000490699 COPB1P53618 953 aaKnown RBP11.84□□□□□ -0.51
VARS2-210ENST00000490699 UBASH3AP57075 661 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 FANCCQ00597 558 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 KCNH2Q12809 1159 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 GSE1Q14687 1217 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 KRT31Q15323 416 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 SLC10A6Q3KNW5 377 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 NOMO2Q5JPE7 1267 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 TMEM240Q5SV17 173 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 KRT39Q6A163 491 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 JADE1Q6IE81 842 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 LRRC43Q8N309 656 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 PHOSPHO2Q8TCD6 241 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 HELQQ8TDG4 1101 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 LINC01599Q8WXQ3 324 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 HERVK_113Q902F9 699 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 RNPC3Q96LT9 517 aaKnown RBP11.84□□□□□ -0.51
VARS2-210ENST00000490699 MED15Q96RN5 788 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 YME1L1Q96TA2 773 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 GAD1Q99259 594 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 TRIM5Q9C035 493 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 UBE2OQ9C0C9 1292 aaKnown RBP11.84□□□□□ -0.51
VARS2-210ENST00000490699 VPS16Q9H269 839 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 NDST4Q9H3R1 872 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 TMEM8AQ9HCN3 771 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 ITGA11Q9UKX5 1188 aa11.84□□□□□ -0.51
VARS2-210ENST00000490699 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.83□□□□□ -0.52
VARS2-210ENST00000490699 LRRIQ3A6PVS8 624 aaPredicted RBP11.83□□□□□ -0.52
VARS2-210ENST00000490699 TBKBP1A7MCY6 615 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 GOLGA6L6A8MZA4 724 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 KRT19P08727 400 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 TRIM49P0CI25 452 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 TRIM49CP0CI26 452 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 SCNN1GP51170 649 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 MLLT1Q03111 559 aaPredicted RBP11.83□□□□□ -0.52
VARS2-210ENST00000490699 UBXN1Q04323 297 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 MYO1EQ12965 1108 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 WDR44Q5JSH3 913 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 GLRA4Q5JXX5 417 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 SPOUT1Q5T280 376 aaKnown RBP11.83□□□□□ -0.52
VARS2-210ENST00000490699 GBP6Q6ZN66 633 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 AGMOQ6ZNB7 445 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 ZNF598Q86UK7 904 aaKnown RBP11.83□□□□□ -0.52
VARS2-210ENST00000490699 RTN4RL1Q86UN2 441 aaPredicted RBP11.83□□□□□ -0.52
VARS2-210ENST00000490699 GAS2L3Q86XJ1 694 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 TMEM192Q8IY95 271 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 TOP1MTQ969P6 601 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 SLC35C1Q96A29 364 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 ZNF560Q96MR9 790 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 UROC1Q96N76 676 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.83□□□□□ -0.522e-10■□□□□ 11
VARS2-210ENST00000490699 DNAI2Q9GZS0 605 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 INTS13Q9NVM9 706 aa11.83□□□□□ -0.52
VARS2-210ENST00000490699 SMIM28A0A1B0GU29 152 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 ARHGEF37A1IGU5 675 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 GTPBP10A4D1E9 387 aaKnown RBP11.82□□□□□ -0.52
VARS2-210ENST00000490699 LGALS16A8MUM7 142 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 OFD1O75665 1012 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 POMCP01189 267 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 NFICP08651 508 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 TPM1P09493 284 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 FGFR1P11362 822 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 ATP1A3P13637 1013 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 P4HA1P13674 534 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 ATP2A2P16615 1042 aaKnown RBP11.82□□□□□ -0.52
VARS2-210ENST00000490699 CYP3A5P20815 502 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 PAX3P23760 479 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 PNPLA4P41247 253 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 GCLMP48507 274 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 FMO5P49326 533 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 RGS19P49795 217 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms