RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 DEFB118Q96PH6 123 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 SLITRK1Q96PX8 696 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 AP1M1Q9BXS5 423 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 MTMR12Q9C0I1 747 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 IP6K2Q9UHH9 426 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 CABYRO75952 493 aa15.27■□□□□ 0.04
ARHGEF39-205ENST00000490638 TOMM70O94826 608 aa15.27■□□□□ 0.04
ARHGEF39-205ENST00000490638 CASP4P49662 377 aa15.27■□□□□ 0.04
ARHGEF39-205ENST00000490638 BCAR1P56945 870 aa15.27■□□□□ 0.04
ARHGEF39-205ENST00000490638 ST3GAL1Q11201 340 aa15.27■□□□□ 0.04
ARHGEF39-205ENST00000490638 MAP7D1Q3KQU3 841 aa15.27■□□□□ 0.04
ARHGEF39-205ENST00000490638 EHD2Q9NZN4 543 aa15.27■□□□□ 0.04
ARHGEF39-205ENST00000490638 RIPK3Q9Y572 518 aa15.27■□□□□ 0.04
ARHGEF39-205ENST00000490638 ZNF142P52746 1687 aaPredicted RBP15.27■□□□□ 0.04
ARHGEF39-205ENST00000490638 PIK3CDO00329 1044 aa15.27■□□□□ 0.04
ARHGEF39-205ENST00000490638 ACCSLQ4AC99 568 aa15.27■□□□□ 0.04
ARHGEF39-205ENST00000490638 TTC1Q99614 292 aa15.27■□□□□ 0.04
ARHGEF39-205ENST00000490638 EPB41L5Q9HCM4 733 aa15.27■□□□□ 0.04
ARHGEF39-205ENST00000490638 PARVAQ9NVD7 372 aa15.27■□□□□ 0.04
ARHGEF39-205ENST00000490638 CPP00450 1065 aa15.27■□□□□ 0.03
ARHGEF39-205ENST00000490638 HMBSP08397 361 aa15.27■□□□□ 0.03
ARHGEF39-205ENST00000490638 ITGB5P18084 799 aa15.27■□□□□ 0.03
ARHGEF39-205ENST00000490638 BBS9Q3SYG4 887 aa15.27■□□□□ 0.03
ARHGEF39-205ENST00000490638 AGPAT5Q9NUQ2 364 aa15.27■□□□□ 0.03
ARHGEF39-205ENST00000490638 HPSEQ9Y251 543 aa15.27■□□□□ 0.03
ARHGEF39-205ENST00000490638 A0A1B0GTH6 734 aa15.27■□□□□ 0.03
ARHGEF39-205ENST00000490638 POC1B-GALNT4F8VUJ3 575 aa15.27■□□□□ 0.03
ARHGEF39-205ENST00000490638 CEP85LQ5SZL2 805 aa15.27■□□□□ 0.03
ARHGEF39-205ENST00000490638 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.27■□□□□ 0.03
ARHGEF39-205ENST00000490638 PORCNQ9H237 461 aa15.27■□□□□ 0.03
ARHGEF39-205ENST00000490638 WDR35Q9P2L0 1181 aa15.27■□□□□ 0.03
ARHGEF39-205ENST00000490638 PPP1R3GB7ZBB8 358 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 P4HA2O15460 535 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 HOXC6P09630 235 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 FGRP09769 529 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 GRK4P32298 578 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 CDH6P55285 790 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 NDUFAF2Q8N183 169 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 CPA5Q8WXQ8 436 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 LSM7Q9UK45 103 aaKnown RBP15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 GOLGA8CPA6NN73 597 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 ALDH2P05091 517 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 EPC2Q52LR7 807 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 PDIK1LQ8N165 341 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 TTC13Q8NBP0 860 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 USP20Q9Y2K6 914 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 PEX10O60683 326 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 ATP9AO75110 1047 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 ZMYND10O75800 440 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 INHBAP08476 426 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 AHDC1Q5TGY3 1603 aaPredicted RBP15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 TADA2BQ86TJ2 420 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 AFAP1L2Q8N4X5 818 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 MYRIPQ8NFW9 859 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 PPP4R1Q8TF05 950 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 HASPINQ8TF76 798 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 RFFLQ8WZ73 363 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 SNCAIPQ9Y6H5 919 aa15.26■□□□□ 0.03
ARHGEF39-205ENST00000490638 ZNF500O60304 480 aaPredicted RBP15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 PLA2G6O60733 806 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 GRAP2O75791 330 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 POMCP01189 267 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 ODC1P11926 461 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 BTG3Q14201 252 aaPredicted RBP15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 MAPRE1Q15691 268 aaKnown RBP15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 ZNF449Q6P9G9 518 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 RHOT1Q8IXI2 618 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 REM2Q8IYK8 340 aaPredicted RBP15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 ANKRD42Q8N9B4 389 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 SCFD1Q8WVM8 642 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 TTC25Q96NG3 672 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 MED15Q96RN5 788 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 UBN1Q9NPG3 1134 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 OLFML3Q9NRN5 406 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 FAN1Q9Y2M0 1017 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 UBIAD1Q9Y5Z9 338 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 LTBP3Q9NS15 1303 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 FAM200BP0CF97 657 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 MYBL1P10243 752 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 MMS22LQ6ZRQ5 1243 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 NUDT18Q6ZVK8 323 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 CD99L2Q8TCZ2 262 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 PNMA5Q96PV4 448 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 CHP1Q99653 195 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 NAGPAQ9UK23 515 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 FARP1Q9Y4F1 1045 aaPredicted RBP15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 PPME1Q9Y570 386 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 CYBBP04839 570 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 CXCL8P10145 99 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 COG7P83436 770 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 ZNF211Q13398 564 aaPredicted RBP15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 SETDB1Q15047 1291 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 BRD3Q15059 726 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 RNF10Q8N5U6 811 aaKnown RBP15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 PLCB1Q9NQ66 1216 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 PFDN4Q9NQP4 134 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 FAM114A2Q9NRY5 505 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 LCMT1Q9UIC8 334 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 NRCAMQ92823 1304 aa15.25■□□□□ 0.03
ARHGEF39-205ENST00000490638 URODP06132 367 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms