RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 XKR3Q5GH77 459 aa10.06□□□□□ -0.8
SRRM1-217ENST00000490543 LRCH2Q5VUJ6 765 aa10.06□□□□□ -0.8
SRRM1-217ENST00000490543 ZNF385CQ66K41 422 aaPredicted RBP10.06□□□□□ -0.8
SRRM1-217ENST00000490543 ANO5Q75V66 913 aa10.06□□□□□ -0.8
SRRM1-217ENST00000490543 GET4Q7L5D6 327 aaPredicted RBP10.06□□□□□ -0.8
SRRM1-217ENST00000490543 DHX32Q7L7V1 743 aaKnown RBP10.06□□□□□ -0.8
SRRM1-217ENST00000490543 GLYCTKQ8IVS8 523 aa10.06□□□□□ -0.8
SRRM1-217ENST00000490543 COLGALT2Q8IYK4 626 aa10.06□□□□□ -0.8
SRRM1-217ENST00000490543 RNF168Q8IYW5 571 aaPredicted RBP10.06□□□□□ -0.8
SRRM1-217ENST00000490543 SMG8Q8ND04 991 aaKnown RBP10.06□□□□□ -0.8
SRRM1-217ENST00000490543 PJA1Q8NG27 643 aa10.06□□□□□ -0.8
SRRM1-217ENST00000490543 NXPE3Q969Y0 559 aa10.06□□□□□ -0.8
SRRM1-217ENST00000490543 FAM193BQ96PV7 902 aaPredicted RBP10.06□□□□□ -0.8
SRRM1-217ENST00000490543 HERC2P3Q9BVR0 1158 aa10.06□□□□□ -0.8
SRRM1-217ENST00000490543 RHOBTB2Q9BYZ6 727 aa10.06□□□□□ -0.8
SRRM1-217ENST00000490543 INO80BQ9C086 356 aaPredicted RBP10.06□□□□□ -0.8
SRRM1-217ENST00000490543 PIDD1Q9HB75 910 aa10.06□□□□□ -0.8
SRRM1-217ENST00000490543 RXFP1Q9HBX9 757 aa10.06□□□□□ -0.8
SRRM1-217ENST00000490543 ANO2Q9NQ90 1003 aa10.06□□□□□ -0.8
SRRM1-217ENST00000490543 SLC2A4RGQ9NR83 387 aa10.06□□□□□ -0.8
SRRM1-217ENST00000490543 AGPAT5Q9NUQ2 364 aa10.06□□□□□ -0.8
SRRM1-217ENST00000490543 MIOSQ9NXC5 875 aa10.06□□□□□ -0.8
SRRM1-217ENST00000490543 NAP1L2Q9ULW6 460 aaPredicted RBP10.06□□□□□ -0.8
SRRM1-217ENST00000490543 MTF2Q9Y483 593 aaPredicted RBP10.06□□□□□ -0.8
SRRM1-217ENST00000490543 NUMBLQ9Y6R0 609 aa10.06□□□□□ -0.8
SRRM1-217ENST00000490543 TGM5O43548 720 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 GAS2O43903 313 aaKnown RBP10.05□□□□□ -0.8
SRRM1-217ENST00000490543 PAPLNO95428 1278 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 SRGAP2CP0DJJ0 459 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 RPL17P18621 184 aaKnown RBP10.05□□□□□ -0.8
SRRM1-217ENST00000490543 OR1G1P47890 313 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 GLUD2P49448 558 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 ATXN1P54253 815 aaKnown RBP10.05□□□□□ -0.8
SRRM1-217ENST00000490543 STARD6P59095 220 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 SNW1Q13573 536 aaKnown RBP10.05□□□□□ -0.8
SRRM1-217ENST00000490543 PLA2G4FQ68DD2 849 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 LILRA6Q6PI73 481 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 PARM1Q6UWI2 310 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 B3GNT9Q6UX72 402 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 CYP26C1Q6V0L0 522 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 MIER3Q7Z3K6 550 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 WHAMMQ8TF30 809 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 FGF14Q92915 247 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 PHKBQ93100 1093 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 GTPBP3Q969Y2 492 aaKnown RBP10.05□□□□□ -0.8
SRRM1-217ENST00000490543 GAD1Q99259 594 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 TEKT3Q9BXF9 490 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 CHST7Q9NS84 486 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.05□□□□□ -0.8
SRRM1-217ENST00000490543 KANSL3Q9P2N6 904 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 STK39Q9UEW8 545 aa10.05□□□□□ -0.8
SRRM1-217ENST00000490543 ARL5CA6NH57 179 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 PRPF3O43395 683 aaKnown RBP10.04□□□□□ -0.8
SRRM1-217ENST00000490543 KINO60870 393 aaKnown RBP10.04□□□□□ -0.8
SRRM1-217ENST00000490543 F11P03951 625 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 CPA1P15085 419 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 CD72P21854 359 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 GNA11P29992 359 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 USP11P51784 963 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 NPEPPSP55786 919 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 NTHL1P78549 312 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 DSG1Q02413 1049 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 DSC1Q08554 894 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 TMEM214Q6NUQ4 689 aaKnown RBP10.04□□□□□ -0.8
SRRM1-217ENST00000490543 PRPF31Q8WWY3 499 aaKnown RBP10.04□□□□□ -0.8
SRRM1-217ENST00000490543 RABGGTAQ92696 567 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 TMEM143Q96AN5 459 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 EIF2AQ9BY44 585 aaKnown RBP10.04□□□□□ -0.8
SRRM1-217ENST00000490543 GPR62Q9BZJ7 368 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 ALG2Q9H553 416 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 SPATA6Q9NWH7 488 aaPredicted RBP10.04□□□□□ -0.8
SRRM1-217ENST00000490543 SSX2IPQ9Y2D8 614 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 HES2Q9Y543 173 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 COL4A3BPQ9Y5P4 624 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 CNTNAP2Q9UHC6 1331 aa10.04□□□□□ -0.8
SRRM1-217ENST00000490543 MTCL1Q9Y4B5 1905 aaKnown RBP10.03□□□□□ -0.8
SRRM1-217ENST00000490543 KANSL1LA0AUZ9 987 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 DCDC2BA2VCK2 349 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 EML1O00423 815 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 TDP2O95551 362 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 ITGA4P13612 1032 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 NCLP19338 710 aaKnown RBP10.03□□□□□ -0.8
SRRM1-217ENST00000490543 MLH1P40692 756 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 SCNN1GP51170 649 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 CSTF1Q05048 431 aaKnown RBP10.03□□□□□ -0.8
SRRM1-217ENST00000490543 C4orf17Q53FE4 359 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 SLC44A4Q53GD3 710 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 SVOPQ8N4V2 548 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 RDM1Q8NG50 284 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 TBCKQ8TEA7 893 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 CCDC12Q8WUD4 166 aaPredicted RBP10.03□□□□□ -0.8
SRRM1-217ENST00000490543 HDAC7Q8WUI4 952 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 DDX23Q9BUQ8 820 aaKnown RBP10.03□□□□□ -0.8
SRRM1-217ENST00000490543 PLEKHA4Q9H4M7 779 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 VPS54Q9P1Q0 977 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 NCDNQ9UBB6 729 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 DPP7Q9UHL4 492 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 IPPQ9Y573 584 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 CHD6Q8TD26 2715 aa10.03□□□□□ -0.8
SRRM1-217ENST00000490543 FAM170BA6NMN3 283 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms