RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 RIN2Q8WYP3 895 aaPredicted RBP19.8■□□□□ 0.76
COL9A3-214ENST00000490398 ST6GALNAC4Q9H4F1 302 aa19.8■□□□□ 0.76
COL9A3-214ENST00000490398 TOPORSQ9NS56 1045 aaPredicted RBP19.8■□□□□ 0.76
COL9A3-214ENST00000490398 KBTBD4Q9NVX7 518 aa19.8■□□□□ 0.76
COL9A3-214ENST00000490398 TUBGCP4Q9UGJ1 667 aa19.8■□□□□ 0.76
COL9A3-214ENST00000490398 A0A0B4J269 797 aa19.79■□□□□ 0.76
COL9A3-214ENST00000490398 SSTR3P32745 418 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-214ENST00000490398 BRCC3P46736 316 aa19.79■□□□□ 0.76
COL9A3-214ENST00000490398 ENOX2Q16206 610 aaKnown RBP19.79■□□□□ 0.76
COL9A3-214ENST00000490398 RARS2Q5T160 578 aaKnown RBP19.79■□□□□ 0.76
COL9A3-214ENST00000490398 RESP18Q5W5W9 173 aa19.79■□□□□ 0.76
COL9A3-214ENST00000490398 GLYCTKQ8IVS8 523 aa19.79■□□□□ 0.76
COL9A3-214ENST00000490398 TMEM87AQ8NBN3 555 aa19.79■□□□□ 0.76
COL9A3-214ENST00000490398 ZSWIM2Q8NEG5 633 aa19.79■□□□□ 0.76
COL9A3-214ENST00000490398 EMILIN2Q9BXX0 1053 aa19.79■□□□□ 0.76
COL9A3-214ENST00000490398 EPHX3Q9H6B9 360 aa19.79■□□□□ 0.76
COL9A3-214ENST00000490398 MRPL44Q9H9J2 332 aaKnown RBP19.79■□□□□ 0.76
COL9A3-214ENST00000490398 FAM50BQ9Y247 325 aa19.79■□□□□ 0.76
COL9A3-214ENST00000490398 TRIOO75962 3097 aa19.79■□□□□ 0.76
COL9A3-214ENST00000490398 SF3B1O75533 1304 aaKnown RBP eCLIP19.78■□□□□ 0.768e-6■■■■■ 107
COL9A3-214ENST00000490398 TRIP11Q15643 1979 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 TTC26A0AVF1 554 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 FSD2A1L4K1 749 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 LACTBL1A8MY62 500 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 POLR2DO15514 142 aaKnown RBP19.78■□□□□ 0.76
COL9A3-214ENST00000490398 ADAM12O43184 909 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 B3GAT3O94766 335 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 CLTAP09496 248 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 SPATA31D3P0C874 917 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 SRGAP2BP0DMP2 458 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 ADSSP30520 456 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 GUCY2FP51841 1108 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 HERC4Q5GLZ8 1057 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-214ENST00000490398 ATL3Q6DD88 541 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 KIAA1841Q6NSI8 718 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 DCLRE1AQ6PJP8 1040 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 SPATA31D4Q6ZUB0 917 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 CEP57Q86XR8 500 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 PALB2Q86YC2 1186 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 LNX1Q8TBB1 728 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-214ENST00000490398 LEO1Q8WVC0 666 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-214ENST00000490398 FBXL18Q96ME1 805 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 MSTO1Q9BUK6 570 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 PANK4Q9NVE7 773 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 STK39Q9UEW8 545 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 PRKAG3Q9UGI9 489 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 CFAP45Q9UL16 551 aa19.78■□□□□ 0.76
COL9A3-214ENST00000490398 TMEM189-UBE2V1I3L0A0 370 aa19.77■□□□□ 0.76
COL9A3-214ENST00000490398 PODXLO00592 558 aa19.77■□□□□ 0.76
COL9A3-214ENST00000490398 OGTO15294 1046 aa19.77■□□□□ 0.76
COL9A3-214ENST00000490398 GAP43P17677 238 aa19.77■□□□□ 0.76
COL9A3-214ENST00000490398 TMC5Q6UXY8 1006 aa19.77■□□□□ 0.76
COL9A3-214ENST00000490398 GRAMD1CQ8IYS0 662 aa19.77■□□□□ 0.76
COL9A3-214ENST00000490398 TRIM9Q9C026 710 aa19.77■□□□□ 0.76
COL9A3-214ENST00000490398 TNMDQ9H2S6 317 aa19.77■□□□□ 0.76
COL9A3-214ENST00000490398 SEL1LQ9UBV2 794 aa19.77■□□□□ 0.76
COL9A3-214ENST00000490398 GCNT3O95395 438 aa19.76■□□□□ 0.75
COL9A3-214ENST00000490398 HOXB8P17481 243 aaPredicted RBP19.76■□□□□ 0.75
COL9A3-214ENST00000490398 ACOT2P49753 483 aa19.76■□□□□ 0.75
COL9A3-214ENST00000490398 CBX2Q14781 532 aaPredicted RBP19.76■□□□□ 0.75
COL9A3-214ENST00000490398 RSPO2Q6UXX9 243 aaPredicted RBP19.76■□□□□ 0.75
COL9A3-214ENST00000490398 IQUBQ8NA54 791 aa19.76■□□□□ 0.75
COL9A3-214ENST00000490398 RPGRIP1Q96KN7 1286 aa19.76■□□□□ 0.75
COL9A3-214ENST00000490398 UROC1Q96N76 676 aa19.76■□□□□ 0.75
COL9A3-214ENST00000490398 CLSTN3Q9BQT9 956 aa19.76■□□□□ 0.75
COL9A3-214ENST00000490398 TTPALQ9BTX7 342 aa19.76■□□□□ 0.75
COL9A3-214ENST00000490398 BLZF1Q9H2G9 400 aa19.76■□□□□ 0.75
COL9A3-214ENST00000490398 ADAM7Q9H2U9 754 aa19.76■□□□□ 0.75
COL9A3-214ENST00000490398 OLFML3Q9NRN5 406 aa19.76■□□□□ 0.75
COL9A3-214ENST00000490398 CPSF3Q9UKF6 684 aaKnown RBP19.76■□□□□ 0.75
COL9A3-214ENST00000490398 STYXL1Q9Y6J8 313 aa19.76■□□□□ 0.75
COL9A3-214ENST00000490398 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-214ENST00000490398 TGM5O43548 720 aa19.75■□□□□ 0.75
COL9A3-214ENST00000490398 PRPF6O94906 941 aaKnown RBP19.75■□□□□ 0.75
COL9A3-214ENST00000490398 SCP2P22307 547 aa19.75■□□□□ 0.75
COL9A3-214ENST00000490398 FGFR3P22607 806 aa19.75■□□□□ 0.75
COL9A3-214ENST00000490398 SP100P23497 879 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-214ENST00000490398 TKTP29401 623 aaKnown RBP19.75■□□□□ 0.75
COL9A3-214ENST00000490398 ZBTB6Q15916 424 aa19.75■□□□□ 0.75
COL9A3-214ENST00000490398 TPRNQ4KMQ1 711 aa19.75■□□□□ 0.75
COL9A3-214ENST00000490398 L1TD1Q5T7N2 865 aaKnown RBP19.75■□□□□ 0.75
COL9A3-214ENST00000490398 ADALQ6DHV7 355 aa19.75■□□□□ 0.75
COL9A3-214ENST00000490398 LILRA6Q6PI73 481 aa19.75■□□□□ 0.75
COL9A3-214ENST00000490398 CRELD2Q6UXH1 353 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-214ENST00000490398 PPFIBP1Q86W92 1011 aa19.75■□□□□ 0.75
COL9A3-214ENST00000490398 PIK3R5Q8WYR1 880 aa19.75■□□□□ 0.75
COL9A3-214ENST00000490398 PHF7Q9BWX1 381 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-214ENST00000490398 POMKQ9H5K3 350 aa19.75■□□□□ 0.75
COL9A3-214ENST00000490398 MAN1C1Q9NR34 630 aa19.75■□□□□ 0.75
COL9A3-214ENST00000490398 SLC38A7Q9NVC3 462 aa19.75■□□□□ 0.75
COL9A3-214ENST00000490398 DZANK1Q9NVP4 752 aa19.75■□□□□ 0.75
COL9A3-214ENST00000490398 SERTAD1Q9UHV2 236 aa19.75■□□□□ 0.75
COL9A3-214ENST00000490398 SSX2IPQ9Y2D8 614 aa19.75■□□□□ 0.75
COL9A3-214ENST00000490398 PLXNA3P51805 1871 aa19.74■□□□□ 0.75
COL9A3-214ENST00000490398 A0A1B0GVL5 298 aa19.74■□□□□ 0.75
COL9A3-214ENST00000490398 LOC730098B7Z3J9 87 aa19.74■□□□□ 0.75
COL9A3-214ENST00000490398 PPEF2O14830 753 aa19.74■□□□□ 0.75
COL9A3-214ENST00000490398 RFPL2O75678 378 aa19.74■□□□□ 0.75
COL9A3-214ENST00000490398 ADH1AP07327 375 aa19.74■□□□□ 0.75
COL9A3-214ENST00000490398 ADRB2P07550 413 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms