RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 EDEM2Q9BV94 578 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 CHST12Q9NRB3 414 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 FBXW11Q9UKB1 542 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 KLK13Q9UKR3 277 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 AKT3Q9Y243 479 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 FAN1Q9Y2M0 1017 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 PRG3Q9Y2Y8 225 aaPredicted RBP8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 PCDHGA5Q9Y5G8 931 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 GON4LQ3T8J9 2241 aa8.06□□□□□ -1.12
PDLIM1-203ENST00000490391 FLNCQ14315 2725 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 PTPRQQ9UMZ3 2332 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 C4orf47A7E2U8 309 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 BACH1O14867 736 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 ALDH2P05091 517 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 HNRNPA1P09651 372 aaKnown RBP eCLIP8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 RPL17P18621 184 aaKnown RBP8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 CSRP1P21291 193 aaKnown RBP8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 FCARP24071 287 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 MPLP40238 635 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 TROAPQ12815 778 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 PPP1R26Q5T8A7 1209 aaPredicted RBP8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 FAM160B1Q5W0V3 765 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 TANGO2Q6ICL3 276 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 KIAA1211LQ6NV74 962 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 PDXDC2PQ6P474 469 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 KBTBD6Q86V97 674 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 GPR65Q8IYL9 337 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 LRRC71Q8N4P6 559 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 GLIS3Q8NEA6 775 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 B3GALT6Q96L58 329 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 MAP7D2Q96T17 732 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 MXRA8Q9BRK3 442 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 SDF4Q9BRK5 362 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 AGO4Q9HCK5 861 aaKnown RBP8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 ZNF302Q9NR11 478 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 VPS45Q9NRW7 570 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 FAM105AQ9NUU6 356 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 FNIP2Q9P278 1114 aa8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 MAFBQ9Y5Q3 323 aaPredicted RBP8.05□□□□□ -1.12
PDLIM1-203ENST00000490391 NOTCH2Q04721 2471 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 NUP205Q92621 2012 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 FAM221BA6H8Z2 402 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 ZNF213O14771 459 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 MAGEB2O15479 319 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 DHX15O43143 795 aaKnown RBP8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 C1QL1O75973 258 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 POU2F2P09086 479 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 SKIP12755 728 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 HOXA9P31269 272 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 DSC1Q08554 894 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 NMIQ13287 307 aaPredicted RBP8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 UBE2SQ16763 222 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 TWF2Q6IBS0 349 aaKnown RBP8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 EFCAB12Q6NXP0 572 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 Q6ZS52 159 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 MRPL10Q7Z7H8 261 aaKnown RBP8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 MAP4K3Q8IVH8 894 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 GLYCTKQ8IVS8 523 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 COLGALT2Q8IYK4 626 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 URGCPQ8TCY9 931 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 GAB3Q8WWW8 586 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 PIBF1Q8WXW3 757 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 FAM3CQ92520 227 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 UBAC1Q9BSL1 405 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 LY9Q9HBG7 655 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 TRPV5Q9NQA5 729 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 CUEDC1Q9NWM3 386 aaPredicted RBP8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 HCFC1R1Q9NWW0 138 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 KCNH3Q9ULD8 1083 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 PIAS3Q9Y6X2 628 aa8.04□□□□□ -1.12
PDLIM1-203ENST00000490391 ABCA7Q8IZY2 2146 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 UBR5O95071 2799 aaPredicted RBP8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 LNP1A1A4G5 178 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 ARNTLO00327 626 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 MEIS1O00470 390 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 CCL16O15467 120 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 POMCP01189 267 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 C8AP07357 584 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 MX1P20591 662 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 RAB27AP51159 221 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 DRP2Q13474 957 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 SLC5A9Q2M3M2 681 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 CEP55Q53EZ4 464 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 SWSAP1Q6NVH7 229 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 CYB5R4Q7L1T6 521 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 CACNA2D4Q7Z3S7 1137 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 RNF217Q8TC41 542 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 ING5Q8WYH8 240 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 ELSPBP1Q96BH3 223 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 EVI5LQ96CN4 794 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 ZC3H10Q96K80 434 aaKnown RBP8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 INSM2Q96T92 566 aaPredicted RBP8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 SPZ1Q9BXG8 430 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 GPR62Q9BZJ7 368 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 BRD9Q9H8M2 597 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 RSAD1Q9HA92 442 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 ZNF334Q9HCZ1 680 aaPredicted RBP8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 RBM12Q9NTZ6 932 aaKnown RBP8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 GDE1Q9NZC3 331 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms