RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 PDIA4P13667 645 aaKnown RBP21.58■■□□□ 1.05
SMC4-222ENST00000490207 KCNE1P15382 129 aa21.58■■□□□ 1.05
SMC4-222ENST00000490207 NMT1P30419 496 aaKnown RBP21.58■■□□□ 1.05
SMC4-222ENST00000490207 ABCD1P33897 745 aa21.58■■□□□ 1.05
SMC4-222ENST00000490207 SOX4Q06945 474 aaPredicted RBP21.58■■□□□ 1.05
SMC4-222ENST00000490207 PSMD5Q16401 504 aa21.58■■□□□ 1.05
SMC4-222ENST00000490207 UPP1Q16831 310 aa21.58■■□□□ 1.05
SMC4-222ENST00000490207 HERC4Q5GLZ8 1057 aaPredicted RBP21.58■■□□□ 1.05
SMC4-222ENST00000490207 ATAT1Q5SQI0 421 aa21.58■■□□□ 1.05
SMC4-222ENST00000490207 SV2BQ7L1I2 683 aa21.58■■□□□ 1.05
SMC4-222ENST00000490207 CEP57Q86XR8 500 aa21.58■■□□□ 1.05
SMC4-222ENST00000490207 PIK3R5Q8WYR1 880 aa21.58■■□□□ 1.05
SMC4-222ENST00000490207 ZMAT2Q96NC0 199 aaKnown RBP21.58■■□□□ 1.05
SMC4-222ENST00000490207 LRFN3Q9BTN0 628 aa21.58■■□□□ 1.05
SMC4-222ENST00000490207 HAPLN2Q9GZV7 340 aa21.58■■□□□ 1.05
SMC4-222ENST00000490207 DPP7Q9UHL4 492 aa21.58■■□□□ 1.05
SMC4-222ENST00000490207 MEFVO15553 781 aaPredicted RBP21.57■■□□□ 1.04
SMC4-222ENST00000490207 PPP6R2O75170 966 aa21.57■■□□□ 1.04
SMC4-222ENST00000490207 B3GAT3O94766 335 aa21.57■■□□□ 1.04
SMC4-222ENST00000490207 YEATS4O95619 227 aa21.57■■□□□ 1.04
SMC4-222ENST00000490207 F13A1P00488 732 aa21.57■■□□□ 1.04
SMC4-222ENST00000490207 CXCL8P10145 99 aa21.57■■□□□ 1.04
SMC4-222ENST00000490207 RPL17P18621 184 aaKnown RBP21.57■■□□□ 1.04
SMC4-222ENST00000490207 DCLRE1AQ6PJP8 1040 aa21.57■■□□□ 1.04
SMC4-222ENST00000490207 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.57■■□□□ 1.04
SMC4-222ENST00000490207 GPR149Q86SP6 731 aa21.57■■□□□ 1.04
SMC4-222ENST00000490207 SFR1Q86XK3 245 aa21.57■■□□□ 1.04
SMC4-222ENST00000490207 PALB2Q86YC2 1186 aa21.57■■□□□ 1.04
SMC4-222ENST00000490207 MAP4K3Q8IVH8 894 aa21.57■■□□□ 1.04
SMC4-222ENST00000490207 SPRYD3Q8NCJ5 442 aa21.57■■□□□ 1.04
SMC4-222ENST00000490207 C3orf58Q8NDZ4 430 aa21.57■■□□□ 1.04
SMC4-222ENST00000490207 FEZF2Q8TBJ5 459 aa21.57■■□□□ 1.04
SMC4-222ENST00000490207 DDX12PQ92771 950 aa21.57■■□□□ 1.04
SMC4-222ENST00000490207 TFIP11Q9UBB9 837 aaKnown RBP21.57■■□□□ 1.04
SMC4-222ENST00000490207 A0A087X0B3 334 aa21.56■■□□□ 1.04
SMC4-222ENST00000490207 PODXLO00592 558 aa21.56■■□□□ 1.04
SMC4-222ENST00000490207 COL9A1P20849 921 aa21.56■■□□□ 1.04
SMC4-222ENST00000490207 GTF2BQ00403 316 aa21.56■■□□□ 1.04
SMC4-222ENST00000490207 SLC10A6Q3KNW5 377 aa21.56■■□□□ 1.04
SMC4-222ENST00000490207 PDXDC1Q6P996 788 aa21.56■■□□□ 1.04
SMC4-222ENST00000490207 CMASQ8NFW8 434 aaPredicted RBP21.56■■□□□ 1.04
SMC4-222ENST00000490207 DDX27Q96GQ7 796 aaKnown RBP21.56■■□□□ 1.04
SMC4-222ENST00000490207 MYMKA6NI61 221 aa21.55■■□□□ 1.04
SMC4-222ENST00000490207 C2CD4DB7Z1M9 353 aa21.55■■□□□ 1.04
SMC4-222ENST00000490207 TGM5O43548 720 aa21.55■■□□□ 1.04
SMC4-222ENST00000490207 C1RP00736 705 aa21.55■■□□□ 1.04
SMC4-222ENST00000490207 CLTAP09496 248 aa21.55■■□□□ 1.04
SMC4-222ENST00000490207 MYBP10242 640 aa21.55■■□□□ 1.04
SMC4-222ENST00000490207 IGFBP6P24592 240 aaPredicted RBP21.55■■□□□ 1.04
SMC4-222ENST00000490207 FOXD4L6Q3SYB3 417 aaPredicted RBP21.55■■□□□ 1.04
SMC4-222ENST00000490207 CD300LGQ6UXG3 332 aa21.55■■□□□ 1.04
SMC4-222ENST00000490207 FOXD4L3Q6VB84 417 aaPredicted RBP21.55■■□□□ 1.04
SMC4-222ENST00000490207 C15orf39Q6ZRI6 1047 aa21.55■■□□□ 1.04
SMC4-222ENST00000490207 PDILTQ8N807 584 aa21.55■■□□□ 1.04
SMC4-222ENST00000490207 LNX1Q8TBB1 728 aaPredicted RBP21.55■■□□□ 1.04
SMC4-222ENST00000490207 HDAC7Q8WUI4 952 aa21.55■■□□□ 1.04
SMC4-222ENST00000490207 C18orf25Q96B23 403 aaPredicted RBP21.55■■□□□ 1.04
SMC4-222ENST00000490207 PANK2Q9BZ23 570 aa21.55■■□□□ 1.04
SMC4-222ENST00000490207 ST6GALNAC4Q9H4F1 302 aa21.55■■□□□ 1.04
SMC4-222ENST00000490207 ANK1P16157 1881 aa21.55■■□□□ 1.04
SMC4-222ENST00000490207 OGTO15294 1046 aa21.54■■□□□ 1.04
SMC4-222ENST00000490207 TRAPPC3O43617 180 aa21.54■■□□□ 1.04
SMC4-222ENST00000490207 SPATA31D3P0C874 917 aa21.54■■□□□ 1.04
SMC4-222ENST00000490207 GAP43P17677 238 aa21.54■■□□□ 1.04
SMC4-222ENST00000490207 FGFR3P22607 806 aa21.54■■□□□ 1.04
SMC4-222ENST00000490207 TNFSF9P41273 254 aa21.54■■□□□ 1.04
SMC4-222ENST00000490207 BRCC3P46736 316 aa21.54■■□□□ 1.04
SMC4-222ENST00000490207 PPP2R3AQ06190 1150 aa21.54■■□□□ 1.04
SMC4-222ENST00000490207 KYAT1Q16773 422 aa21.54■■□□□ 1.04
SMC4-222ENST00000490207 ZC2HC1CQ53FD0 456 aaPredicted RBP21.54■■□□□ 1.04
SMC4-222ENST00000490207 SLC39A4Q6P5W5 647 aa21.54■■□□□ 1.04
SMC4-222ENST00000490207 SPATA31D4Q6ZUB0 917 aa21.54■■□□□ 1.04
SMC4-222ENST00000490207 CCDC149Q6ZUS6 474 aa21.54■■□□□ 1.04
SMC4-222ENST00000490207 TDRD5Q8NAT2 981 aaKnown RBP21.54■■□□□ 1.04
SMC4-222ENST00000490207 DNAJC19Q96DA6 116 aa21.54■■□□□ 1.04
SMC4-222ENST00000490207 MSTO1Q9BUK6 570 aa21.54■■□□□ 1.04
SMC4-222ENST00000490207 PLEKHA4Q9H4M7 779 aa21.54■■□□□ 1.04
SMC4-222ENST00000490207 SEL1LQ9UBV2 794 aa21.54■■□□□ 1.04
SMC4-222ENST00000490207 PRR33A8MZF0 331 aa21.53■■□□□ 1.04
SMC4-222ENST00000490207 I3L4J1 428 aa21.53■■□□□ 1.04
SMC4-222ENST00000490207 RFPL2O75678 378 aa21.53■■□□□ 1.04
SMC4-222ENST00000490207 TKTP29401 623 aaKnown RBP21.53■■□□□ 1.04
SMC4-222ENST00000490207 PKP1Q13835 747 aa21.53■■□□□ 1.04
SMC4-222ENST00000490207 HVCN1Q96D96 273 aa21.53■■□□□ 1.04
SMC4-222ENST00000490207 CLSTN3Q9BQT9 956 aa21.53■■□□□ 1.04
SMC4-222ENST00000490207 PLEKHA5Q9HAU0 1116 aa21.53■■□□□ 1.04
SMC4-222ENST00000490207 TUBGCP4Q9UGJ1 667 aa21.53■■□□□ 1.04
SMC4-222ENST00000490207 FBXW11Q9UKB1 542 aa21.53■■□□□ 1.04
SMC4-222ENST00000490207 A0A0B4J269 797 aa21.52■■□□□ 1.04
SMC4-222ENST00000490207 CCDC195A0A1B0GUA6 201 aa21.52■■□□□ 1.04
SMC4-222ENST00000490207 TTC26A0AVF1 554 aa21.52■■□□□ 1.04
SMC4-222ENST00000490207 FAM189A1O60320 539 aa21.52■■□□□ 1.04
SMC4-222ENST00000490207 CUTAO60888 179 aa21.52■■□□□ 1.04
SMC4-222ENST00000490207 IDEP14735 1019 aa21.52■■□□□ 1.04
SMC4-222ENST00000490207 RPL9P32969 192 aaKnown RBP21.52■■□□□ 1.04
SMC4-222ENST00000490207 SPAG1Q07617 926 aa21.52■■□□□ 1.04
SMC4-222ENST00000490207 ZBTB41Q5SVQ8 909 aa21.52■■□□□ 1.04
SMC4-222ENST00000490207 LILRA6Q6PI73 481 aa21.52■■□□□ 1.04
SMC4-222ENST00000490207 ZNF720Q7Z2F6 126 aa21.52■■□□□ 1.04
SMC4-222ENST00000490207 KREMEN2Q8NCW0 462 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms