RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 LCORLQ8N3X6 602 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 SUPT20HQ8NEM7 779 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 ATL2Q8NHH9 583 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 SSH1Q8WYL5 1049 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 CRAMP1Q96RY5 1269 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 LDAHQ9H6V9 325 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 SYNPO2LQ9H987 977 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 TMEM140Q9NV12 185 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 SLC23A1Q9UHI7 598 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 AJAP1Q9UKB5 411 aaPredicted RBP5.24□□□□□ -1.57
HMGN1-218ENST00000490032 MAP3K2Q9Y2U5 619 aa5.24□□□□□ -1.57
HMGN1-218ENST00000490032 HKR1P10072 659 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 TYRP1P17643 537 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 PCSK1P29120 753 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 WASP42768 502 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 SEC24CP53992 1094 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 MXRA7P84157 204 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 SCAPQ12770 1279 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 MTM1Q13496 603 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 INAVAQ3KP66 663 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 TSHZ3Q63HK5 1081 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 B3GNTL1Q67FW5 361 aaPredicted RBP5.23□□□□□ -1.57
HMGN1-218ENST00000490032 OLFML1Q6UWY5 402 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 PRIMA1Q86XR5 153 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 TMEM132CQ8N3T6 1108 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 OR2I1PQ8NGU4 316 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 STON2Q8WXE9 905 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 ASB10Q8WXI3 467 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 PHACTR3Q96KR7 559 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 REXO4Q9GZR2 422 aaKnown RBP5.23□□□□□ -1.57
HMGN1-218ENST00000490032 PUS7LQ9H0K6 701 aaKnown RBP5.23□□□□□ -1.57
HMGN1-218ENST00000490032 TMEM74BQ9NUR3 256 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 MCM8Q9UJA3 840 aa5.23□□□□□ -1.57
HMGN1-218ENST00000490032 A0A1B0GTW7 788 aa5.22□□□□□ -1.57
HMGN1-218ENST00000490032 GPR32O75388 356 aa5.22□□□□□ -1.57
HMGN1-218ENST00000490032 CDKL5O76039 1030 aa5.22□□□□□ -1.57
HMGN1-218ENST00000490032 AMY1AP04745 511 aa5.22□□□□□ -1.57
HMGN1-218ENST00000490032 ATP8B2P98198 1209 aa5.22□□□□□ -1.57
HMGN1-218ENST00000490032 OCA2Q04671 838 aa5.22□□□□□ -1.57
HMGN1-218ENST00000490032 FOXI1Q12951 378 aa5.22□□□□□ -1.57
HMGN1-218ENST00000490032 ZNF529Q6P280 563 aa5.22□□□□□ -1.57
HMGN1-218ENST00000490032 NECAB2Q7Z6G3 386 aa5.22□□□□□ -1.57
HMGN1-218ENST00000490032 DDX42Q86XP3 938 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGN1-218ENST00000490032 CMTR2Q8IYT2 770 aaKnown RBP5.22□□□□□ -1.57
HMGN1-218ENST00000490032 KRTAP9-8Q9BYQ0 159 aa5.22□□□□□ -1.57
HMGN1-218ENST00000490032 RNPEPQ9H4A4 650 aa5.22□□□□□ -1.57
HMGN1-218ENST00000490032 MANSC1Q9H8J5 431 aa5.22□□□□□ -1.57
HMGN1-218ENST00000490032 FBXO34Q9NWN3 711 aa5.22□□□□□ -1.57
HMGN1-218ENST00000490032 ACTL7AQ9Y615 435 aa5.22□□□□□ -1.57
HMGN1-218ENST00000490032 NUDT3O95989 172 aa5.21□□□□□ -1.58
HMGN1-218ENST00000490032 FOSP01100 380 aaPredicted RBP5.21□□□□□ -1.58
HMGN1-218ENST00000490032 SPDYE7PQ495Y7 208 aa5.21□□□□□ -1.58
HMGN1-218ENST00000490032 CBARPQ8N350 705 aaPredicted RBP5.21□□□□□ -1.58
HMGN1-218ENST00000490032 ZGPATQ8N5A5 531 aaKnown RBP5.21□□□□□ -1.58
HMGN1-218ENST00000490032 CNTD1Q8N815 330 aa5.21□□□□□ -1.58
HMGN1-218ENST00000490032 BOD1Q96IK1 185 aa5.21□□□□□ -1.58
HMGN1-218ENST00000490032 SLC2A13Q96QE2 648 aa5.21□□□□□ -1.58
HMGN1-218ENST00000490032 MYOCQ99972 504 aa5.21□□□□□ -1.58
HMGN1-218ENST00000490032 SLC5A4Q9NY91 659 aa5.21□□□□□ -1.58
HMGN1-218ENST00000490032 DNM3Q9UQ16 869 aa5.21□□□□□ -1.58
HMGN1-218ENST00000490032 CCDC78A2IDD5 438 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 ZAR1LA6NP61 321 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 PRSS23O95084 383 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 FBLP22087 321 aaKnown RBP5.2□□□□□ -1.58
HMGN1-218ENST00000490032 FGFR4P22455 802 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 SLC6A2P23975 617 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 CXADRP78310 365 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 DACT2Q5SW24 774 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 GPR149Q86SP6 731 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 AMOTL1Q8IY63 956 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 FAM43AQ8N2R8 423 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 CCHCR1Q8TD31 782 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 CAVIN3Q969G5 261 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 ZSWIM1Q9BR11 485 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 ALOXE3Q9BYJ1 711 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 SPC25Q9HBM1 224 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 RNF181Q9P0P0 153 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 ZNHIT2Q9UHR6 403 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 KCNE5Q9UJ90 142 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 NOX1Q9Y5S8 564 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 MAST3O60307 1309 aa5.2□□□□□ -1.58
HMGN1-218ENST00000490032 ESRRBO95718 433 aa5.19□□□□□ -1.58
HMGN1-218ENST00000490032 ITGAMP11215 1152 aa5.19□□□□□ -1.58
HMGN1-218ENST00000490032 CKBP12277 381 aa5.19□□□□□ -1.58
HMGN1-218ENST00000490032 ALAS1P13196 640 aa5.19□□□□□ -1.58
HMGN1-218ENST00000490032 DDCP20711 480 aa5.19□□□□□ -1.58
HMGN1-218ENST00000490032 MPLP40238 635 aa5.19□□□□□ -1.58
HMGN1-218ENST00000490032 CLK3P49761 638 aaKnown RBP5.19□□□□□ -1.58
HMGN1-218ENST00000490032 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGN1-218ENST00000490032 NRG4Q8WWG1 115 aa5.19□□□□□ -1.58
HMGN1-218ENST00000490032 SLC9A6Q92581 669 aa5.19□□□□□ -1.58
HMGN1-218ENST00000490032 C7orf25Q9BPX7 421 aa5.19□□□□□ -1.58
HMGN1-218ENST00000490032 RIOX1Q9H6W3 641 aa5.19□□□□□ -1.58
HMGN1-218ENST00000490032 GALNT9Q9HCQ5 603 aa5.19□□□□□ -1.58
HMGN1-218ENST00000490032 ALG13Q9NP73 1137 aaKnown RBP5.19□□□□□ -1.58
HMGN1-218ENST00000490032 ATP8A1Q9Y2Q0 1164 aa5.19□□□□□ -1.58
HMGN1-218ENST00000490032 MYBBP1AQ9BQG0 1328 aaKnown RBP5.19□□□□□ -1.58
HMGN1-218ENST00000490032 FDXRP22570 491 aa5.18□□□□□ -1.58
HMGN1-218ENST00000490032 CTXN1P60606 82 aa5.18□□□□□ -1.58
HMGN1-218ENST00000490032 MPP3Q13368 585 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms