RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 CA8P35219 290 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 TNFSF9P41273 254 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 BRCC3P46736 316 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 MCL1Q07820 350 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 LARP1BQ659C4 914 aaKnown RBP12.97□□□□□ -0.33
SRSF4-204ENST00000489898 SPATA31D4Q6ZUB0 917 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 HACE1Q8IYU2 909 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 KCTD17Q8N5Z5 321 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 KREMEN2Q8NCW0 462 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 IFT74Q96LB3 600 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 AK8Q96MA6 479 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 RIPOR3Q96MK2 946 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 PHOX2BQ99453 314 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 COLEC11Q9BWP8 271 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 STRA6Q9BX79 667 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 EMILIN2Q9BXX0 1053 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 MRPL4Q9BYD3 311 aaKnown RBP12.97□□□□□ -0.33
SRSF4-204ENST00000489898 FGFBP2Q9BYJ0 223 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 KMT5AQ9NQR1 393 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 KCND2Q9NZV8 630 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 TUBGCP4Q9UGJ1 667 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 SORCS3Q9UPU3 1222 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 HCN4Q9Y3Q4 1203 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 KIF3AQ9Y496 699 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 ZNF638Q14966 1978 aaKnown RBP12.97□□□□□ -0.33
SRSF4-204ENST00000489898 TTC26A0AVF1 554 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 CCDC169A6NNP5 214 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 K7ERI5 159 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 SLC26A4O43511 780 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 TOM1L1O75674 476 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 CXCL8P10145 99 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 AARSP49588 968 aaKnown RBP eCLIP12.96□□□□□ -0.33
SRSF4-204ENST00000489898 WNT7BP56706 349 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 NHLH1Q02575 133 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 MRPL58Q14197 206 aaKnown RBP12.96□□□□□ -0.33
SRSF4-204ENST00000489898 MCM6Q14566 821 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 NOLC1Q14978 699 aaKnown RBP eCLIP12.96□□□□□ -0.33
SRSF4-204ENST00000489898 ZBTB6Q15916 424 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 PSMD5Q16401 504 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 FAM171A1Q5VUB5 890 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 CES5AQ6NT32 575 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 ZPBP2Q6X784 338 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.96□□□□□ -0.33
SRSF4-204ENST00000489898 GLYCTKQ8IVS8 523 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 TDRD5Q8NAT2 981 aaKnown RBP12.96□□□□□ -0.33
SRSF4-204ENST00000489898 HDAC7Q8WUI4 952 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 RAD54LQ92698 747 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 EPSTI1Q96J88 318 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 USP28Q96RU2 1077 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 ADPGKQ9BRR6 497 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 TTPALQ9BTX7 342 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 CCSER1Q9C0I3 900 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 NT5C3AQ9H0P0 336 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.96□□□□□ -0.33
SRSF4-204ENST00000489898 EPS15L1Q9UBC2 864 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 ODF2LQ9ULJ1 636 aa12.96□□□□□ -0.33
SRSF4-204ENST00000489898 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.96□□□□□ -0.33
SRSF4-204ENST00000489898 NCANO14594 1321 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 H3BQV1 296 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 PPEF2O14830 753 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 NARSO43776 548 aaKnown RBP12.95□□□□□ -0.34
SRSF4-204ENST00000489898 ZMYND10O75800 440 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 POU2F2P09086 479 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 NPR3P17342 541 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 LONP1P36776 959 aaKnown RBP12.95□□□□□ -0.34
SRSF4-204ENST00000489898 OSTNP61366 133 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 NCBP1Q09161 790 aaKnown RBP12.95□□□□□ -0.34
SRSF4-204ENST00000489898 SPECC1Q5M775 1068 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 CCDC149Q6ZUS6 474 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 ZBTB33Q86T24 672 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 GPBP1Q86WP2 473 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 PALB2Q86YC2 1186 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 MAP4K3Q8IVH8 894 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 FBXL6Q8N531 539 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 DNAJC19Q96DA6 116 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 INTS4Q96HW7 963 aaKnown RBP12.95□□□□□ -0.34
SRSF4-204ENST00000489898 CLIC6Q96NY7 704 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 TSHZ2Q9NRE2 1034 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 ZDHHC7Q9NXF8 308 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 NR2E1Q9Y466 385 aa12.95□□□□□ -0.34
SRSF4-204ENST00000489898 GVINP1Q7Z2Y8 2422 aa12.94□□□□□ -0.34
SRSF4-204ENST00000489898 CCDC195A0A1B0GUA6 201 aa12.94□□□□□ -0.34
SRSF4-204ENST00000489898 FRMD3A2A2Y4 597 aa12.94□□□□□ -0.34
SRSF4-204ENST00000489898 WDR27A2RRH5 827 aa12.94□□□□□ -0.34
SRSF4-204ENST00000489898 VPS37CA5D8V6 355 aaPredicted RBP12.94□□□□□ -0.34
SRSF4-204ENST00000489898 HOXA9P31269 272 aa12.94□□□□□ -0.34
SRSF4-204ENST00000489898 NTHL1P78549 312 aa12.94□□□□□ -0.34
SRSF4-204ENST00000489898 RAB33AQ14088 237 aa12.94□□□□□ -0.34
SRSF4-204ENST00000489898 ENOX2Q16206 610 aaKnown RBP12.94□□□□□ -0.34
SRSF4-204ENST00000489898 SLC8B1Q6J4K2 584 aa12.94□□□□□ -0.34
SRSF4-204ENST00000489898 TMEM105Q8N8V8 129 aa12.94□□□□□ -0.34
SRSF4-204ENST00000489898 RSAD2Q8WXG1 361 aa12.94□□□□□ -0.34
SRSF4-204ENST00000489898 PRKD2Q9BZL6 878 aa12.94□□□□□ -0.34
SRSF4-204ENST00000489898 PLEKHA4Q9H4M7 779 aa12.94□□□□□ -0.34
SRSF4-204ENST00000489898 ANKFY1Q9P2R3 1169 aa12.94□□□□□ -0.34
SRSF4-204ENST00000489898 DUSP12Q9UNI6 340 aa12.94□□□□□ -0.34
SRSF4-204ENST00000489898 RBM19Q9Y4C8 960 aaKnown RBP12.94□□□□□ -0.34
SRSF4-204ENST00000489898 ZFHX2Q9C0A1 2572 aaPredicted RBP12.94□□□□□ -0.34
SRSF4-204ENST00000489898 SPTBN4Q9H254 2564 aa12.94□□□□□ -0.34
SRSF4-204ENST00000489898 A0A0B4J269 797 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms