RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 MIS18BP1Q6P0N0 1132 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 CATSPER4Q7RTX7 472 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 RALGPS2Q86X27 583 aaPredicted RBP8.17□□□□□ -1.1
COL9A1-209ENST00000489861 MFSD6LQ8IWD5 586 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 SCUBE3Q8IX30 993 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 SYNPOQ8N3V7 929 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 SMG8Q8ND04 991 aaKnown RBP8.17□□□□□ -1.1
COL9A1-209ENST00000489861 LSM14AQ8ND56 463 aaKnown RBP8.17□□□□□ -1.1
COL9A1-209ENST00000489861 PIP4K2CQ8TBX8 421 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 CSGALNACT1Q8TDX6 532 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 DEPDC1BQ8WUY9 529 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 SMARCD2Q92925 531 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 GAD1Q99259 594 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 PAAF1Q9BRP4 392 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 MTA3Q9BTC8 594 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 PRORYQ9H606 182 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 C8orf33Q9H7E9 229 aaPredicted RBP8.17□□□□□ -1.1
COL9A1-209ENST00000489861 PSTPIP2Q9H939 334 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 SNTG2Q9NY99 539 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 MBD1Q9UIS9 605 aaPredicted RBP8.17□□□□□ -1.1
COL9A1-209ENST00000489861 SLC8A2Q9UPR5 921 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.16□□□□□ -1.1
COL9A1-209ENST00000489861 HEPACAM2A8MVW5 462 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 MEIS1O00470 390 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 MOSPD3O75425 235 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 PTPN2P17706 415 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 ENGP17813 658 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 HOXA11P31270 313 aaPredicted RBP8.16□□□□□ -1.1
COL9A1-209ENST00000489861 OR1D2P34982 312 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 MLH1P40692 756 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 GNAQP50148 359 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 CLCN6P51797 869 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 CFHR1Q03591 330 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 CYP4F3Q08477 520 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 CEP55Q53EZ4 464 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 TRIM61Q5EBN2 209 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 C1orf228Q6PIY5 440 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 CYB5R4Q7L1T6 521 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 CYP2U1Q7Z449 544 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 MARCH9Q86YJ5 346 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 KSR1Q8IVT5 923 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 TEX2Q8IWB9 1127 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 TMEFF1Q8IYR6 380 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 TMTC2Q8N394 836 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 GSTCDQ8NEC7 633 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 NCOA7Q8NI08 942 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 EXOC6Q8TAG9 804 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 HASPINQ8TF76 798 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 PIGKQ92643 395 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 MSANTD3Q96H12 275 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 PGBD1Q96JS3 809 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 CAMK1GQ96NX5 476 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 TTPALQ9BTX7 342 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 APOL6Q9BWW8 343 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 TRPV4Q9HBA0 871 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 FSCN3Q9NQT6 498 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 AGPAT5Q9NUQ2 364 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 GTSE1Q9NYZ3 720 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 GABBR1Q9UBS5 961 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 SEC63Q9UGP8 760 aaKnown RBP8.16□□□□□ -1.1
COL9A1-209ENST00000489861 EVLQ9UI08 416 aaPredicted RBP8.16□□□□□ -1.1
COL9A1-209ENST00000489861 CEP131Q9UPN4 1083 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 HES2Q9Y543 173 aa8.16□□□□□ -1.1
COL9A1-209ENST00000489861 USP9YO00507 2555 aaPredicted RBP8.16□□□□□ -1.1
COL9A1-209ENST00000489861 MYO18AQ92614 2054 aaKnown RBP8.15□□□□□ -1.1
COL9A1-209ENST00000489861 NUP210Q8TEM1 1887 aaPredicted RBP8.15□□□□□ -1.1
COL9A1-209ENST00000489861 SPDYE3A6NKU9 549 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 CHADO15335 359 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 IGHDP01880 384 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 FTH1P19P0C7X4 201 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 CD59P13987 128 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 GJA1P17302 382 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 BCKDHBP21953 392 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 ABCG1P45844 678 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 LMAN2Q12907 356 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 RAB33AQ14088 237 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 FAM171A1Q5VUB5 890 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 CATIPQ7Z7H3 387 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 CEP57Q86XR8 500 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 CAMKK1Q8N5S9 505 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 CTCFLQ8NI51 663 aaPredicted RBP8.15□□□□□ -1.1
COL9A1-209ENST00000489861 ZSCAN18Q8TBC5 510 aaPredicted RBP8.15□□□□□ -1.1
COL9A1-209ENST00000489861 ZFYVE19Q96K21 471 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 LRRC3BQ96PB8 259 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 CEP89Q96ST8 783 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 CORO1BQ9BR76 489 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 LZTS2Q9BRK4 669 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 IFT122Q9HBG6 1241 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 TMEM74BQ9NUR3 256 aa8.15□□□□□ -1.1
COL9A1-209ENST00000489861 SPTBN1Q01082 2364 aaKnown RBP8.14□□□□□ -1.11
COL9A1-209ENST00000489861 ZMYM2Q9UBW7 1377 aa8.14□□□□□ -1.11
COL9A1-209ENST00000489861 SF3B1O75533 1304 aaKnown RBP eCLIP8.14□□□□□ -1.11
COL9A1-209ENST00000489861 ZNF638Q14966 1978 aaKnown RBP8.14□□□□□ -1.11
COL9A1-209ENST00000489861 PLXND1Q9Y4D7 1925 aa8.14□□□□□ -1.11
COL9A1-209ENST00000489861 IFIT3O14879 490 aaKnown RBP8.14□□□□□ -1.11
COL9A1-209ENST00000489861 NR1I2O75469 434 aa8.14□□□□□ -1.11
COL9A1-209ENST00000489861 TADA2AO75478 443 aa8.14□□□□□ -1.11
COL9A1-209ENST00000489861 MICAL2O94851 1124 aa8.14□□□□□ -1.11
COL9A1-209ENST00000489861 CALM1P0DP23 149 aa8.14□□□□□ -1.11
COL9A1-209ENST00000489861 CALM2P0DP24 149 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms