RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 ZNHIT2Q9UHR6 403 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 SSX2IPQ9Y2D8 614 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 DIS3Q9Y2L1 958 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 NOC2LQ9Y3T9 749 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 TTLL3Q9Y4R7 772 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 ABCB11O95342 1321 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 IGSF1Q8N6C5 1336 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 LRRC37A3O60309 1634 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 UBR1Q8IWV7 1749 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 ARHGAP10A1A4S6 786 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 SH3PXD2BA1X283 911 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 SMIM23A6NLE4 172 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 EIF3FO00303 357 aaPredicted RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 NDC80O14777 642 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 VILLO15195 856 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 FOXP2O15409 715 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 GSC2O15499 205 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 AP1G1O43747 822 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 FGFR1OPO95684 399 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 INHAP05111 366 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 PYGMP11217 842 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 ITGA4P13612 1032 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 RARGP13631 454 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 XBP1P17861 261 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 GNAT2P19087 354 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 TAC1P20366 129 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 GTF2H1P32780 548 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 STX2P32856 288 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 TCF7P36402 384 aaPredicted RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 ARPC4P59998 168 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 ATP2C1P98194 919 aaPredicted RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 IL9RQ01113 521 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 CDR2Q01850 454 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 RELAQ04206 551 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 PTPN12Q05209 780 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 STRN3Q13033 797 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 NR5A1Q13285 461 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 DHX34Q14147 1143 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 SLC18A3Q16572 532 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 SMUG1Q53HV7 270 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 ACSBG2Q5FVE4 666 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 ZNF362Q5T0B9 420 aaPredicted RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 LRRC8BQ6P9F7 803 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 C1orf228Q6PIY5 440 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 SLC2A7Q6PXP3 512 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 PPP1R21Q6ZMI0 780 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 DPH6Q7L8W6 267 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 MICU3Q86XE3 530 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 KBTBD2Q8IY47 623 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 FAM186BQ8IYM0 893 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 CRACR2BQ8N4Y2 399 aaPredicted RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 METTL13Q8N6R0 699 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 FAM133AQ8N9E0 248 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 SYT2Q8N9I0 419 aaPredicted RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 ZNF784Q8NCA9 323 aaPredicted RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 PLEKHO2Q8TD55 490 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 MGARPQ8TDB4 240 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 EPS8L3Q8TE67 593 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 CADM1Q9BY67 442 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 TANGO6Q9C0B7 1094 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 CCDC113Q9H0I3 377 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 SEMA4AQ9H3S1 761 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 MMRN2Q9H8L6 949 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 NKIRAS1Q9NYS0 192 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 CLIC5Q9NZA1 410 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 THEGQ9P2T0 379 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 RASAL2Q9UJF2 1139 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 PACSIN2Q9UNF0 486 aaPredicted RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 FAM32AQ9Y421 112 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 TELO2Q9Y4R8 837 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 SLC12A7Q9Y666 1083 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 NFAT5O94916 1531 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 NID2Q14112 1375 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 USP31Q70CQ4 1352 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 PNMA6FA0A0J9YX94 578 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 BOLA2-SMG1P6H3BVE0 249 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 KIAA0391O15091 583 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 ST8SIA5O15466 376 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 RIPK2O43353 540 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 KLRC4O43908 158 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 SORBS3O60504 671 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 RNASEH1O60930 286 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 GSTT2P0CG29 244 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 GSTT2BP0CG30 244 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 VDRP11473 427 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 RXRAP19793 462 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 FSHRP23945 695 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 GUCY1A2P33402 732 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 CA8P35219 290 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 LONP1P36776 959 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 CCT8P50990 548 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 NEK3P51956 506 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 RCAN1P53805 252 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 PLTPP55058 493 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 PTENP60484 403 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 PSMC1P62191 440 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 XIAPP98170 497 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 DR1Q01658 176 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 ASPHQ12797 758 aa5.06□□□□□ -1.6
SNRNP40-206ENST00000489853 SLC39A6Q13433 755 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms