RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 CCDC83Q8IWF9 413 aa21.35■■□□□ 1.01
APTX-229ENST00000489583 ELMOD1Q8N336 334 aa21.35■■□□□ 1.01
APTX-229ENST00000489583 ST13P5Q8NFI4 369 aaPredicted RBP21.35■■□□□ 1.01
APTX-229ENST00000489583 FGF14Q92915 247 aa21.35■■□□□ 1.01
APTX-229ENST00000489583 DRC1Q96MC2 740 aa21.35■■□□□ 1.01
APTX-229ENST00000489583 KIFC3Q9BVG8 833 aa21.35■■□□□ 1.01
APTX-229ENST00000489583 MRPL4Q9BYD3 311 aaKnown RBP21.35■■□□□ 1.01
APTX-229ENST00000489583 MTRRQ9UBK8 725 aa21.35■■□□□ 1.01
APTX-229ENST00000489583 KCNG1Q9UIX4 513 aa21.35■■□□□ 1.01
APTX-229ENST00000489583 NUB1Q9Y5A7 615 aa21.35■■□□□ 1.01
APTX-229ENST00000489583 R4GN57 208 aa21.35■■□□□ 1.01
APTX-229ENST00000489583 H7C4K7 107 aa21.34■■□□□ 1.01
APTX-229ENST00000489583 LAMTOR5O43504 91 aa21.34■■□□□ 1.01
APTX-229ENST00000489583 FGFR3P22607 806 aa21.34■■□□□ 1.01
APTX-229ENST00000489583 FXR2P51116 673 aaKnown RBP eCLIP21.34■■□□□ 1.01
APTX-229ENST00000489583 PDIA5Q14554 519 aa21.34■■□□□ 1.01
APTX-229ENST00000489583 MLF2Q15773 248 aaPredicted RBP21.34■■□□□ 1.01
APTX-229ENST00000489583 SLC44A4Q53GD3 710 aa21.34■■□□□ 1.01
APTX-229ENST00000489583 EEF1DP3Q658K8 133 aa21.34■■□□□ 1.01
APTX-229ENST00000489583 SNX29Q8TEQ0 813 aa21.34■■□□□ 1.01
APTX-229ENST00000489583 BORCS6Q96GS4 357 aa21.34■■□□□ 1.01
APTX-229ENST00000489583 ZSCAN31Q96LW9 406 aaPredicted RBP21.34■■□□□ 1.01
APTX-229ENST00000489583 DDX19AQ9NUU7 478 aaKnown RBP21.34■■□□□ 1.01
APTX-229ENST00000489583 SPATA6Q9NWH7 488 aaPredicted RBP21.34■■□□□ 1.01
APTX-229ENST00000489583 TNFSF13BQ9Y275 285 aa21.34■■□□□ 1.01
APTX-229ENST00000489583 USP20Q9Y2K6 914 aa21.34■■□□□ 1.01
APTX-229ENST00000489583 RBM19Q9Y4C8 960 aaKnown RBP21.34■■□□□ 1.01
APTX-229ENST00000489583 BACE2Q9Y5Z0 518 aa21.34■■□□□ 1.01
APTX-229ENST00000489583 KINO60870 393 aaKnown RBP21.33■■□□□ 1.01
APTX-229ENST00000489583 MAGEA9P43362 315 aa21.33■■□□□ 1.01
APTX-229ENST00000489583 PEX3P56589 373 aa21.33■■□□□ 1.01
APTX-229ENST00000489583 UPP1Q16831 310 aa21.33■■□□□ 1.01
APTX-229ENST00000489583 RSPO2Q6UXX9 243 aaPredicted RBP21.33■■□□□ 1.01
APTX-229ENST00000489583 PPP1R10Q96QC0 940 aaKnown RBP21.33■■□□□ 1.01
APTX-229ENST00000489583 KXD1Q9BQD3 176 aa21.33■■□□□ 1.01
APTX-229ENST00000489583 FOXQ1Q9C009 403 aa21.33■■□□□ 1.01
APTX-229ENST00000489583 KMT5AQ9NQR1 393 aa21.33■■□□□ 1.01
APTX-229ENST00000489583 GDE1Q9NZC3 331 aa21.33■■□□□ 1.01
APTX-229ENST00000489583 MRPS17Q9Y2R5 130 aaKnown RBP21.33■■□□□ 1.01
APTX-229ENST00000489583 RIF1Q5UIP0 2472 aaKnown RBP21.33■■□□□ 1
APTX-229ENST00000489583 SMIM28A0A1B0GU29 152 aa21.32■■□□□ 1
APTX-229ENST00000489583 ADAM12O43184 909 aa21.32■■□□□ 1
APTX-229ENST00000489583 SP9P0CG40 484 aa21.32■■□□□ 1
APTX-229ENST00000489583 PTPN2P17706 415 aa21.32■■□□□ 1
APTX-229ENST00000489583 TKTP29401 623 aaKnown RBP21.32■■□□□ 1
APTX-229ENST00000489583 GRM5P41594 1212 aa21.32■■□□□ 1
APTX-229ENST00000489583 ARPP19P56211 112 aa21.32■■□□□ 1
APTX-229ENST00000489583 OSTNP61366 133 aa21.32■■□□□ 1
APTX-229ENST00000489583 STRN3Q13033 797 aa21.32■■□□□ 1
APTX-229ENST00000489583 NAB2Q15742 525 aa21.32■■□□□ 1
APTX-229ENST00000489583 NT5DC1Q5TFE4 455 aa21.32■■□□□ 1
APTX-229ENST00000489583 FBXO18Q8NFZ0 1043 aa21.32■■□□□ 1
APTX-229ENST00000489583 ITFG1Q8TB96 612 aa21.32■■□□□ 1
APTX-229ENST00000489583 ACAP3Q96P50 834 aa21.32■■□□□ 1
APTX-229ENST00000489583 NELL2Q99435 816 aa21.32■■□□□ 1
APTX-229ENST00000489583 KIF3AQ9Y496 699 aa21.32■■□□□ 1
APTX-229ENST00000489583 FAM170BA6NMN3 283 aa21.31■■□□□ 1
APTX-229ENST00000489583 LAD1O00515 517 aa21.31■■□□□ 1
APTX-229ENST00000489583 ZNF197O14709 1029 aa21.31■■□□□ 1
APTX-229ENST00000489583 SMTNP53814 917 aa21.31■■□□□ 1
APTX-229ENST00000489583 ZBTB41Q5SVQ8 909 aa21.31■■□□□ 1
APTX-229ENST00000489583 ZNF461Q8TAF7 563 aa21.31■■□□□ 1
APTX-229ENST00000489583 ING5Q8WYH8 240 aa21.31■■□□□ 1
APTX-229ENST00000489583 SECISBP2LQ93073 1101 aaKnown RBP21.31■■□□□ 1
APTX-229ENST00000489583 RPP25Q9BUL9 199 aaKnown RBP21.31■■□□□ 1
APTX-229ENST00000489583 OSBPL6Q9BZF3 934 aa21.31■■□□□ 1
APTX-229ENST00000489583 TMEM134Q9H6X4 195 aa21.31■■□□□ 1
APTX-229ENST00000489583 C17orf75Q9HAS0 396 aa21.31■■□□□ 1
APTX-229ENST00000489583 POLD4Q9HCU8 107 aa21.31■■□□□ 1
APTX-229ENST00000489583 SH2B1Q9NRF2 756 aaPredicted RBP21.31■■□□□ 1
APTX-229ENST00000489583 DNMT3BQ9UBC3 853 aaKnown RBP21.31■■□□□ 1
APTX-229ENST00000489583 VPS13AQ96RL7 3174 aa21.3■■□□□ 1
APTX-229ENST00000489583 FAM186AA6NE01 2351 aa21.3■■□□□ 1
APTX-229ENST00000489583 PODXLO00592 558 aa21.3■■□□□ 1
APTX-229ENST00000489583 RHOP08100 348 aa21.3■■□□□ 1
APTX-229ENST00000489583 MARCKSP29966 332 aaPredicted RBP21.3■■□□□ 1
APTX-229ENST00000489583 RPL9P32969 192 aaKnown RBP21.3■■□□□ 1
APTX-229ENST00000489583 MATR3P43243 847 aaKnown RBP eCLIP21.3■■□□□ 1
APTX-229ENST00000489583 NPTX2P47972 431 aa21.3■■□□□ 1
APTX-229ENST00000489583 CYP4A22Q5TCH4 519 aa21.3■■□□□ 1
APTX-229ENST00000489583 IQCEQ6IPM2 695 aa21.3■■□□□ 1
APTX-229ENST00000489583 NPAS3Q8IXF0 933 aa21.3■■□□□ 1
APTX-229ENST00000489583 KIAA2013Q8IYS2 634 aa21.3■■□□□ 1
APTX-229ENST00000489583 ATRIPQ8WXE1 791 aa21.3■■□□□ 1
APTX-229ENST00000489583 RUBCNQ92622 972 aa21.3■■□□□ 1
APTX-229ENST00000489583 MCRS1Q96EZ8 462 aa21.3■■□□□ 1
APTX-229ENST00000489583 ACO2Q99798 780 aaKnown RBP21.3■■□□□ 1
APTX-229ENST00000489583 TIPINQ9BVW5 301 aa21.3■■□□□ 1
APTX-229ENST00000489583 CYP4F11Q9HBI6 524 aa21.3■■□□□ 1
APTX-229ENST00000489583 GOLGA2P5Q9HBQ8 144 aa21.3■■□□□ 1
APTX-229ENST00000489583 HCFC1R1Q9NWW0 138 aa21.3■■□□□ 1
APTX-229ENST00000489583 I3L4J1 428 aa21.29■■□□□ 1
APTX-229ENST00000489583 SYN3O14994 580 aa21.29■■□□□ 1
APTX-229ENST00000489583 ECI2O75521 394 aa21.29■■□□□ 1
APTX-229ENST00000489583 MCF2P10911 925 aa21.29■■□□□ 1
APTX-229ENST00000489583 HARSP12081 509 aaKnown RBP21.29■■□□□ 1
APTX-229ENST00000489583 BRCC3P46736 316 aa21.29■■□□□ 1
APTX-229ENST00000489583 PTGDRQ13258 359 aa21.29■■□□□ 1
APTX-229ENST00000489583 ZRSR1Q15695 479 aaKnown RBP21.29■■□□□ 1
APTX-229ENST00000489583 ZNF852Q6ZMS4 543 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms