RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 CCDC34Q96HJ3 373 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 EMILIN2Q9BXX0 1053 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 FGFBP2Q9BYJ0 223 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 CPSF3Q9UKF6 684 aaKnown RBP18.9■□□□□ 0.62
MDC1-206ENST00000489540 MYH11P35749 1972 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 F8W810 466 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 LINC01565O15544 149 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 LILRB3O75022 631 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 B3GAT3O94766 335 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 ZNF202O95125 648 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 BMP1P13497 986 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 GARTP22102 1010 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 CASP1P29466 404 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 ADSSP30520 456 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 TNFSF9P41273 254 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 UPP1Q16831 310 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 TMEM184AQ6ZMB5 413 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 ZNF507Q8TCN5 953 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 AUTS2Q8WXX7 1259 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 HPS3Q969F9 1004 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 GPR62Q9BZJ7 368 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 CHST7Q9NS84 486 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 CHMP5Q9NZZ3 219 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 CACNG4Q9UBN1 327 aa18.89■□□□□ 0.61
MDC1-206ENST00000489540 LACTBL1A8MY62 500 aa18.88■□□□□ 0.61
MDC1-206ENST00000489540 TISP43B9A030 160 aa18.88■□□□□ 0.61
MDC1-206ENST00000489540 H3BQ06 376 aaPredicted RBP18.88■□□□□ 0.61
MDC1-206ENST00000489540 CLASP2O75122 1294 aaKnown RBP18.88■□□□□ 0.61
MDC1-206ENST00000489540 KIF4AO95239 1232 aa18.88■□□□□ 0.61
MDC1-206ENST00000489540 LDHAP00338 332 aaKnown RBP18.88■□□□□ 0.61
MDC1-206ENST00000489540 GLUD2P49448 558 aa18.88■□□□□ 0.61
MDC1-206ENST00000489540 CLCNKBP51801 687 aa18.88■□□□□ 0.61
MDC1-206ENST00000489540 DSG1Q02413 1049 aa18.88■□□□□ 0.61
MDC1-206ENST00000489540 ENOX2Q16206 610 aaKnown RBP18.88■□□□□ 0.61
MDC1-206ENST00000489540 ZBTB41Q5SVQ8 909 aa18.88■□□□□ 0.61
MDC1-206ENST00000489540 KIAA0319Q5VV43 1072 aa18.88■□□□□ 0.61
MDC1-206ENST00000489540 KANK3Q6NY19 840 aa18.88■□□□□ 0.61
MDC1-206ENST00000489540 KRBA2Q6ZNG9 492 aa18.88■□□□□ 0.61
MDC1-206ENST00000489540 EPM2AIP1Q7L775 607 aaPredicted RBP18.88■□□□□ 0.61
MDC1-206ENST00000489540 PPFIBP1Q86W92 1011 aa18.88■□□□□ 0.61
MDC1-206ENST00000489540 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.88■□□□□ 0.61
MDC1-206ENST00000489540 KIF12Q96FN5 646 aa18.88■□□□□ 0.61
MDC1-206ENST00000489540 IKZF4Q9H2S9 585 aa18.88■□□□□ 0.61
MDC1-206ENST00000489540 GOLPH3LQ9H4A5 285 aa18.88■□□□□ 0.61
MDC1-206ENST00000489540 KIAA0391O15091 583 aaKnown RBP18.87■□□□□ 0.61
MDC1-206ENST00000489540 XPOTO43592 962 aaKnown RBP18.87■□□□□ 0.61
MDC1-206ENST00000489540 TRAPPC3O43617 180 aa18.87■□□□□ 0.61
MDC1-206ENST00000489540 CYP3A5P20815 502 aa18.87■□□□□ 0.61
MDC1-206ENST00000489540 ACOT2P49753 483 aa18.87■□□□□ 0.61
MDC1-206ENST00000489540 KCNQ1P51787 676 aa18.87■□□□□ 0.61
MDC1-206ENST00000489540 SOX4Q06945 474 aaPredicted RBP18.87■□□□□ 0.61
MDC1-206ENST00000489540 DLX2Q07687 328 aaPredicted RBP18.87■□□□□ 0.61
MDC1-206ENST00000489540 PSMD2Q13200 908 aa18.87■□□□□ 0.61
MDC1-206ENST00000489540 KCNC3Q14003 757 aa18.87■□□□□ 0.61
MDC1-206ENST00000489540 ZBTB6Q15916 424 aa18.87■□□□□ 0.61
MDC1-206ENST00000489540 HASPINQ8TF76 798 aa18.87■□□□□ 0.61
MDC1-206ENST00000489540 CASP10Q92851 521 aa18.87■□□□□ 0.61
MDC1-206ENST00000489540 FAM212AQ96EL1 285 aa18.87■□□□□ 0.61
MDC1-206ENST00000489540 KLHL5Q96PQ7 755 aa18.87■□□□□ 0.61
MDC1-206ENST00000489540 ASB7Q9H672 318 aa18.87■□□□□ 0.61
MDC1-206ENST00000489540 GOLGA2P5Q9HBQ8 144 aa18.87■□□□□ 0.61
MDC1-206ENST00000489540 EXOC1Q9NV70 894 aa18.87■□□□□ 0.61
MDC1-206ENST00000489540 CLEC1BQ9P126 229 aa18.87■□□□□ 0.61
MDC1-206ENST00000489540 UBQLN1Q9UMX0 589 aaKnown RBP18.87■□□□□ 0.61
MDC1-206ENST00000489540 FAM50BQ9Y247 325 aa18.87■□□□□ 0.61
MDC1-206ENST00000489540 EYSQ5T1H1 3165 aa18.87■□□□□ 0.61
MDC1-206ENST00000489540 UBE4BO95155 1302 aa18.86■□□□□ 0.61
MDC1-206ENST00000489540 PODXLO00592 558 aa18.86■□□□□ 0.61
MDC1-206ENST00000489540 C2CD2LO14523 706 aa18.86■□□□□ 0.61
MDC1-206ENST00000489540 KLRC4O43908 158 aa18.86■□□□□ 0.61
MDC1-206ENST00000489540 TBX10O75333 385 aa18.86■□□□□ 0.61
MDC1-206ENST00000489540 GLP2RO95838 553 aa18.86■□□□□ 0.61
MDC1-206ENST00000489540 KLRC2P26717 231 aa18.86■□□□□ 0.61
MDC1-206ENST00000489540 SNRPFP62306 86 aaKnown RBP18.86■□□□□ 0.61
MDC1-206ENST00000489540 CREMQ03060 361 aa18.86■□□□□ 0.61
MDC1-206ENST00000489540 GLIS3Q8NEA6 775 aa18.86■□□□□ 0.61
MDC1-206ENST00000489540 VN1R2Q8NFZ6 395 aa18.86■□□□□ 0.61
MDC1-206ENST00000489540 CCDC47Q96A33 483 aaKnown RBP18.86■□□□□ 0.61
MDC1-206ENST00000489540 C18orf25Q96B23 403 aaPredicted RBP18.86■□□□□ 0.61
MDC1-206ENST00000489540 TTPALQ9BTX7 342 aa18.86■□□□□ 0.61
MDC1-206ENST00000489540 RXFP1Q9HBX9 757 aa18.86■□□□□ 0.61
MDC1-206ENST00000489540 PLXNA4Q9HCM2 1894 aa18.86■□□□□ 0.61
MDC1-206ENST00000489540 SLC39A2Q9NP94 309 aa18.86■□□□□ 0.61
MDC1-206ENST00000489540 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.86■□□□□ 0.61
MDC1-206ENST00000489540 CD207Q9UJ71 328 aa18.86■□□□□ 0.61
MDC1-206ENST00000489540 DERAQ9Y315 318 aa18.86■□□□□ 0.61
MDC1-206ENST00000489540 CNPP09543 421 aaKnown RBP18.85■□□□□ 0.61
MDC1-206ENST00000489540 KMT5BQ4FZB7 885 aa18.85■□□□□ 0.61
MDC1-206ENST00000489540 FAM171A1Q5VUB5 890 aa18.85■□□□□ 0.61
MDC1-206ENST00000489540 PTCRAQ6ISU1 281 aaPredicted RBP18.85■□□□□ 0.61
MDC1-206ENST00000489540 ARMCX5Q6P1M9 558 aa18.85■□□□□ 0.61
MDC1-206ENST00000489540 PDXDC1Q6P996 788 aa18.85■□□□□ 0.61
MDC1-206ENST00000489540 CRELD2Q6UXH1 353 aaPredicted RBP18.85■□□□□ 0.61
MDC1-206ENST00000489540 SCFD1Q8WVM8 642 aa18.85■□□□□ 0.61
MDC1-206ENST00000489540 MSLNLQ96KJ4 702 aa18.85■□□□□ 0.61
MDC1-206ENST00000489540 FAM213AQ9BRX8 229 aa18.85■□□□□ 0.61
MDC1-206ENST00000489540 HCFC2Q9Y5Z7 792 aa18.85■□□□□ 0.61
MDC1-206ENST00000489540 GRXCR2A6NFK2 248 aa18.84■□□□□ 0.61
MDC1-206ENST00000489540 EXTL3O43909 919 aa18.84■□□□□ 0.61
MDC1-206ENST00000489540 IL18RAPO95256 599 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms