RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 PPP1R10Q96QC0 940 aaKnown RBP13.11□□□□□ -0.31
SFXN3-207ENST00000489434 CCDC94Q9BW85 323 aaPredicted RBP13.11□□□□□ -0.31
SFXN3-207ENST00000489434 FOXQ1Q9C009 403 aa13.11□□□□□ -0.31
SFXN3-207ENST00000489434 BHMT2Q9H2M3 363 aa13.11□□□□□ -0.31
SFXN3-207ENST00000489434 MTRRQ9UBK8 725 aa13.11□□□□□ -0.31
SFXN3-207ENST00000489434 NOL7Q9UMY1 257 aaKnown RBP13.11□□□□□ -0.31
SFXN3-207ENST00000489434 MRPS23Q9Y3D9 190 aaKnown RBP13.11□□□□□ -0.31
SFXN3-207ENST00000489434 BACE2Q9Y5Z0 518 aa13.11□□□□□ -0.31
SFXN3-207ENST00000489434 CDY1Q9Y6F8 540 aa13.11□□□□□ -0.31
SFXN3-207ENST00000489434 VWA8A3KMH1 1905 aa13.11□□□□□ -0.31
SFXN3-207ENST00000489434 DCHS1Q96JQ0 3298 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 CCDC169A6NNP5 214 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 PRRG1O14668 218 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 ADAM12O43184 909 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 MAGEA9P43362 315 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 TRAPPC10P48553 1259 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 UBXN2BQ14CS0 331 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 UPP1Q16831 310 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 SLC44A4Q53GD3 710 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 GLRA4Q5JXX5 417 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 TTC38Q5R3I4 469 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 RSPO2Q6UXX9 243 aaPredicted RBP13.1□□□□□ -0.31
SFXN3-207ENST00000489434 ITFG1Q8TB96 612 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 RUBCNQ92622 972 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 NELL2Q99435 816 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 KXD1Q9BQD3 176 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 LLPHQ9BRT6 129 aaKnown RBP13.1□□□□□ -0.31
SFXN3-207ENST00000489434 RPP25Q9BUL9 199 aaKnown RBP13.1□□□□□ -0.31
SFXN3-207ENST00000489434 KIFC3Q9BVG8 833 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 OSBPL6Q9BZF3 934 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 SPATA6Q9NWH7 488 aaPredicted RBP13.1□□□□□ -0.31
SFXN3-207ENST00000489434 GDE1Q9NZC3 331 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 DLGAP2Q9P1A6 1054 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 LRWD1Q9UFC0 647 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 LIMCH1Q9UPQ0 1083 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 USP20Q9Y2K6 914 aa13.1□□□□□ -0.31
SFXN3-207ENST00000489434 FAM170BA6NMN3 283 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 NCAM2O15394 837 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 LAMTOR5O43504 91 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 KINO60870 393 aaKnown RBP13.09□□□□□ -0.31
SFXN3-207ENST00000489434 LRG1P02750 347 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 TKTP29401 623 aaKnown RBP13.09□□□□□ -0.31
SFXN3-207ENST00000489434 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
SFXN3-207ENST00000489434 CLCNKBP51801 687 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 DMP1Q13316 513 aaPredicted RBP13.09□□□□□ -0.31
SFXN3-207ENST00000489434 PDIA5Q14554 519 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 ZNF568Q3ZCX4 644 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 ZBTB41Q5SVQ8 909 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 NT5DC1Q5TFE4 455 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 NPAS3Q8IXF0 933 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 FANCMQ8IYD8 2048 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 TCHPQ9BT92 498 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 MRPL4Q9BYD3 311 aaKnown RBP13.09□□□□□ -0.31
SFXN3-207ENST00000489434 CXCL16Q9H2A7 254 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 HCFC1R1Q9NWW0 138 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 FBXO4Q9UKT5 387 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 KIAA1024Q9UPX6 916 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 DNM3Q9UQ16 869 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 TNFSF13BQ9Y275 285 aa13.09□□□□□ -0.31
SFXN3-207ENST00000489434 MRPS17Q9Y2R5 130 aaKnown RBP13.09□□□□□ -0.31
SFXN3-207ENST00000489434 RBM19Q9Y4C8 960 aaKnown RBP13.09□□□□□ -0.31
SFXN3-207ENST00000489434 GPR179Q6PRD1 2367 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 F5P12259 2224 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 SMIM28A0A1B0GU29 152 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 H7C4K7 107 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 ECI2O75521 394 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 PTPN2P17706 415 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 GRM5P41594 1212 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 HMGN5P82970 282 aaKnown RBP13.08□□□□□ -0.32
SFXN3-207ENST00000489434 ZNF528Q3MIS6 628 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 KIAA2013Q8IYS2 634 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 ELMOD1Q8N336 334 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 FAM184AQ8NB25 1140 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 FBXO18Q8NFZ0 1043 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 ZNF461Q8TAF7 563 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 ATRIPQ8WXE1 791 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 ING5Q8WYH8 240 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 DRC1Q96MC2 740 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 DDX23Q9BUQ8 820 aaKnown RBP13.08□□□□□ -0.32
SFXN3-207ENST00000489434 DDX19AQ9NUU7 478 aaKnown RBP13.08□□□□□ -0.32
SFXN3-207ENST00000489434 DNMT3BQ9UBC3 853 aaKnown RBP13.08□□□□□ -0.32
SFXN3-207ENST00000489434 KCNG1Q9UIX4 513 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 NUB1Q9Y5A7 615 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 CITO14578 2027 aa13.08□□□□□ -0.32
SFXN3-207ENST00000489434 I3L4J1 428 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 ZNF197O14709 1029 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 SYN3O14994 580 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 SPTLC1O15269 473 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 EDN1P05305 212 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 RHOP08100 348 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 GLULP15104 373 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 RPL9P32969 192 aaKnown RBP13.07□□□□□ -0.32
SFXN3-207ENST00000489434 NPTX2P47972 431 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 PEX3P56589 373 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 OSTNP61366 133 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 VARS2Q5ST30 1063 aaKnown RBP13.07□□□□□ -0.32
SFXN3-207ENST00000489434 KRT79Q5XKE5 535 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 SLC8B1Q6J4K2 584 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 ZNF852Q6ZMS4 543 aa13.07□□□□□ -0.32
SFXN3-207ENST00000489434 CCDC83Q8IWF9 413 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms