RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 NOLC1Q14978 699 aaKnown RBP eCLIP13.74□□□□□ -0.21
SRRM1-216ENST00000489130 KARSQ15046 597 aaKnown RBP13.74□□□□□ -0.21
SRRM1-216ENST00000489130 PSMD5Q16401 504 aa13.74□□□□□ -0.21
SRRM1-216ENST00000489130 CD300LGQ6UXG3 332 aa13.74□□□□□ -0.21
SRRM1-216ENST00000489130 SPATA31D4Q6ZUB0 917 aa13.74□□□□□ -0.21
SRRM1-216ENST00000489130 CEP57Q86XR8 500 aa13.74□□□□□ -0.21
SRRM1-216ENST00000489130 GLYCTKQ8IVS8 523 aa13.74□□□□□ -0.21
SRRM1-216ENST00000489130 C3orf58Q8NDZ4 430 aa13.74□□□□□ -0.21
SRRM1-216ENST00000489130 RAD54LQ92698 747 aa13.74□□□□□ -0.21
SRRM1-216ENST00000489130 PBXIP1Q96AQ6 731 aa13.74□□□□□ -0.21
SRRM1-216ENST00000489130 ACSF2Q96CM8 615 aaPredicted RBP13.74□□□□□ -0.21
SRRM1-216ENST00000489130 DDX27Q96GQ7 796 aaKnown RBP13.74□□□□□ -0.21
SRRM1-216ENST00000489130 ZBTB45Q96K62 511 aaPredicted RBP13.74□□□□□ -0.21
SRRM1-216ENST00000489130 GOLGA2P5Q9HBQ8 144 aa13.74□□□□□ -0.21
SRRM1-216ENST00000489130 FBXW11Q9UKB1 542 aa13.74□□□□□ -0.21
SRRM1-216ENST00000489130 CLIC4Q9Y696 253 aa13.74□□□□□ -0.21
SRRM1-216ENST00000489130 CLUHO75153 1309 aa13.73□□□□□ -0.21
SRRM1-216ENST00000489130 C2orf16Q68DN1 1984 aa13.73□□□□□ -0.21
SRRM1-216ENST00000489130 CLDN3O15551 220 aa13.73□□□□□ -0.21
SRRM1-216ENST00000489130 TRAPPC3O43617 180 aa13.73□□□□□ -0.21
SRRM1-216ENST00000489130 ASGR2P07307 311 aa13.73□□□□□ -0.21
SRRM1-216ENST00000489130 MYBP10242 640 aa13.73□□□□□ -0.21
SRRM1-216ENST00000489130 MCM6Q14566 821 aa13.73□□□□□ -0.21
SRRM1-216ENST00000489130 HAUS6Q7Z4H7 955 aa13.73□□□□□ -0.21
SRRM1-216ENST00000489130 RASSF8Q8NHQ8 419 aa13.73□□□□□ -0.21
SRRM1-216ENST00000489130 SMG7Q92540 1137 aaKnown RBP13.73□□□□□ -0.21
SRRM1-216ENST00000489130 LARP4BQ92615 738 aaKnown RBP13.73□□□□□ -0.21
SRRM1-216ENST00000489130 STAMQ92783 540 aa13.73□□□□□ -0.21
SRRM1-216ENST00000489130 PARVGQ9HBI0 331 aa13.73□□□□□ -0.21
SRRM1-216ENST00000489130 MTRRQ9UBK8 725 aa13.73□□□□□ -0.21
SRRM1-216ENST00000489130 LIMD1Q9UGP4 676 aa13.73□□□□□ -0.21
SRRM1-216ENST00000489130 FBXO2Q9UK22 296 aaPredicted RBP13.73□□□□□ -0.21
SRRM1-216ENST00000489130 MTMR6Q9Y217 621 aa13.73□□□□□ -0.21
SRRM1-216ENST00000489130 SRPRBQ9Y5M8 271 aaKnown RBP13.73□□□□□ -0.21
SRRM1-216ENST00000489130 MORC2Q9Y6X9 1032 aaPredicted RBP13.73□□□□□ -0.21
SRRM1-216ENST00000489130 PODXLO00592 558 aa13.72□□□□□ -0.21
SRRM1-216ENST00000489130 ADAM12O43184 909 aa13.72□□□□□ -0.21
SRRM1-216ENST00000489130 N4BP1O75113 896 aaKnown RBP13.72□□□□□ -0.21
SRRM1-216ENST00000489130 ZMYND10O75800 440 aa13.72□□□□□ -0.21
SRRM1-216ENST00000489130 FAM13AO94988 1023 aa13.72□□□□□ -0.21
SRRM1-216ENST00000489130 PIGRP01833 764 aa13.72□□□□□ -0.21
SRRM1-216ENST00000489130 HARSP12081 509 aaKnown RBP13.72□□□□□ -0.21
SRRM1-216ENST00000489130 RPL9P32969 192 aaKnown RBP13.72□□□□□ -0.21
SRRM1-216ENST00000489130 DDIT3P35638 169 aa13.72□□□□□ -0.21
SRRM1-216ENST00000489130 DHX8Q14562 1220 aaKnown RBP13.72□□□□□ -0.21
SRRM1-216ENST00000489130 SLC10A6Q3KNW5 377 aa13.72□□□□□ -0.21
SRRM1-216ENST00000489130 FAM173BQ6P4H8 233 aa13.72□□□□□ -0.21
SRRM1-216ENST00000489130 SUGP1Q8IWZ8 645 aaKnown RBP13.72□□□□□ -0.21
SRRM1-216ENST00000489130 FBXL6Q8N531 539 aa13.72□□□□□ -0.21
SRRM1-216ENST00000489130 MYCT1Q8N699 235 aa13.72□□□□□ -0.21
SRRM1-216ENST00000489130 EPSTI1Q96J88 318 aa13.72□□□□□ -0.21
SRRM1-216ENST00000489130 PRKD2Q9BZL6 878 aa13.72□□□□□ -0.21
SRRM1-216ENST00000489130 HAPLN2Q9GZV7 340 aa13.72□□□□□ -0.21
SRRM1-216ENST00000489130 TBX20Q9UMR3 447 aa13.72□□□□□ -0.21
SRRM1-216ENST00000489130 BACE2Q9Y5Z0 518 aa13.72□□□□□ -0.21
SRRM1-216ENST00000489130 VWA8A3KMH1 1905 aa13.71□□□□□ -0.21
SRRM1-216ENST00000489130 K7ENM7 598 aa13.71□□□□□ -0.21
SRRM1-216ENST00000489130 TRAK2O60296 914 aa13.71□□□□□ -0.21
SRRM1-216ENST00000489130 TKTP29401 623 aaKnown RBP13.71□□□□□ -0.21
SRRM1-216ENST00000489130 MARCKSP29966 332 aaPredicted RBP13.71□□□□□ -0.21
SRRM1-216ENST00000489130 HOXA9P31269 272 aa13.71□□□□□ -0.21
SRRM1-216ENST00000489130 BRCC3P46736 316 aa13.71□□□□□ -0.21
SRRM1-216ENST00000489130 RAB33AQ14088 237 aa13.71□□□□□ -0.21
SRRM1-216ENST00000489130 SEZ6Q53EL9 994 aa13.71□□□□□ -0.21
SRRM1-216ENST00000489130 SPECC1Q5M775 1068 aa13.71□□□□□ -0.21
SRRM1-216ENST00000489130 ANKS3Q6ZW76 656 aa13.71□□□□□ -0.21
SRRM1-216ENST00000489130 USP49Q70CQ1 688 aa13.71□□□□□ -0.21
SRRM1-216ENST00000489130 C18orf25Q96B23 403 aaPredicted RBP13.71□□□□□ -0.21
SRRM1-216ENST00000489130 BICD1Q96G01 975 aa13.71□□□□□ -0.21
SRRM1-216ENST00000489130 FIZ1Q96SL8 496 aa13.71□□□□□ -0.21
SRRM1-216ENST00000489130 SMOC2Q9H3U7 446 aa13.71□□□□□ -0.21
SRRM1-216ENST00000489130 ZSCAN16Q9H4T2 348 aaPredicted RBP13.71□□□□□ -0.21
SRRM1-216ENST00000489130 PLEKHA5Q9HAU0 1116 aa13.71□□□□□ -0.21
SRRM1-216ENST00000489130 PIDD1Q9HB75 910 aa13.71□□□□□ -0.21
SRRM1-216ENST00000489130 EPS15L1Q9UBC2 864 aa13.71□□□□□ -0.21
SRRM1-216ENST00000489130 STK17AQ9UEE5 414 aa13.71□□□□□ -0.21
SRRM1-216ENST00000489130 ZNF318Q5VUA4 2279 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 I3L4J1 428 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 HNRNPDLO14979 420 aaKnown RBP13.7□□□□□ -0.22
SRRM1-216ENST00000489130 SYN3O14994 580 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 STX6O43752 255 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 FAM189A1O60320 539 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 TBCAO75347 108 aaKnown RBP13.7□□□□□ -0.22
SRRM1-216ENST00000489130 KRT18P05783 430 aaKnown RBP13.7□□□□□ -0.22
SRRM1-216ENST00000489130 C8AP07357 584 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 POU2F2P09086 479 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 CLTAP09496 248 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 HNRNPA1P09651 372 aaKnown RBP eCLIP13.7□□□□□ -0.22
SRRM1-216ENST00000489130 CXCL8P10145 99 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 ABCD1P33897 745 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 OR1D2P34982 312 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 LIG4P49917 911 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 GTF2BQ00403 316 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 KYAT1Q16773 422 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 LIN9Q5TKA1 542 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 RSPO2Q6UXX9 243 aaPredicted RBP13.7□□□□□ -0.22
SRRM1-216ENST00000489130 MAP4K3Q8IVH8 894 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 SNX21Q969T3 373 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 CLIC6Q96NY7 704 aa13.7□□□□□ -0.22
SRRM1-216ENST00000489130 KCNK12Q9HB15 430 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms