RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 TRPV6Q9H1D0 765 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 TRMT1Q9NXH9 659 aaKnown RBP11.8□□□□□ -0.52
COL21A1-211ENST00000488912 PDCD11Q14690 1871 aaKnown RBP11.79□□□□□ -0.52
COL21A1-211ENST00000488912 F8VZ95 297 aa11.79□□□□□ -0.52
COL21A1-211ENST00000488912 HLA-DRAP01903 254 aa11.79□□□□□ -0.52
COL21A1-211ENST00000488912 RPLP2P05387 115 aaKnown RBP11.79□□□□□ -0.52
COL21A1-211ENST00000488912 RFX1P22670 979 aa11.79□□□□□ -0.52
COL21A1-211ENST00000488912 GRM5P41594 1212 aa11.79□□□□□ -0.52
COL21A1-211ENST00000488912 PIK3CAP42336 1068 aa11.79□□□□□ -0.52
COL21A1-211ENST00000488912 SURF1Q15526 300 aa11.79□□□□□ -0.52
COL21A1-211ENST00000488912 KYAT1Q16773 422 aa11.79□□□□□ -0.52
COL21A1-211ENST00000488912 TRIM71Q2Q1W2 868 aaKnown RBP11.79□□□□□ -0.52
COL21A1-211ENST00000488912 SLC10A6Q3KNW5 377 aa11.79□□□□□ -0.52
COL21A1-211ENST00000488912 HGSNATQ68CP4 663 aa11.79□□□□□ -0.52
COL21A1-211ENST00000488912 TSC1Q92574 1164 aa11.79□□□□□ -0.52
COL21A1-211ENST00000488912 KAT5Q92993 513 aa11.79□□□□□ -0.52
COL21A1-211ENST00000488912 STK33Q9BYT3 514 aa11.79□□□□□ -0.52
COL21A1-211ENST00000488912 OSBPL7Q9BZF2 842 aa11.79□□□□□ -0.52
COL21A1-211ENST00000488912 NHEJ1Q9H9Q4 299 aaPredicted RBP11.79□□□□□ -0.52
COL21A1-211ENST00000488912 UBE2TQ9NPD8 197 aaPredicted RBP11.79□□□□□ -0.52
COL21A1-211ENST00000488912 SPTLC3Q9NUV7 552 aa11.79□□□□□ -0.52
COL21A1-211ENST00000488912 AIPL1Q9NZN9 384 aa11.79□□□□□ -0.52
COL21A1-211ENST00000488912 MYO6Q9UM54 1294 aa11.79□□□□□ -0.52
COL21A1-211ENST00000488912 MROH7Q68CQ1 1323 aa11.79□□□□□ -0.52
COL21A1-211ENST00000488912 LACTBL1A8MY62 500 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 RPS6KA5O75582 802 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 IL18RAPO95256 599 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 NFICP08651 508 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 HSPA8P11142 646 aaKnown RBP11.78□□□□□ -0.52
COL21A1-211ENST00000488912 CBX1P83916 185 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 TFAMQ00059 246 aaKnown RBP11.78□□□□□ -0.52
COL21A1-211ENST00000488912 DRAP1Q14919 205 aaPredicted RBP11.78□□□□□ -0.52
COL21A1-211ENST00000488912 ARHGAP44Q17R89 818 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 PPM1KQ8N3J5 372 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 NXF3Q9H4D5 531 aaKnown RBP11.78□□□□□ -0.52
COL21A1-211ENST00000488912 KCND1Q9NSA2 647 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 OGDHLQ9ULD0 1010 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 HES2Q9Y543 173 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 ARVCFO00192 962 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 NDUFA10O95299 355 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 AP3M2P53677 418 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 ASIC2Q16515 512 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 DUOXA2Q1HG44 320 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 TDRD12Q587J7 1177 aaKnown RBP11.78□□□□□ -0.52
COL21A1-211ENST00000488912 UBXN11Q5T124 520 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 JADE1Q6IE81 842 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 APBB1IPQ7Z5R6 666 aaPredicted RBP11.78□□□□□ -0.52
COL21A1-211ENST00000488912 CTU1Q7Z7A3 348 aaKnown RBP11.78□□□□□ -0.52
COL21A1-211ENST00000488912 ACRBPQ8NEB7 543 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 HELQQ8TDG4 1101 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 PPP1R13BQ96KQ4 1090 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 NT5C1BQ96P26 610 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 ACAP3Q96P50 834 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 TRIM6Q9C030 488 aaPredicted RBP11.78□□□□□ -0.52
COL21A1-211ENST00000488912 SNTG2Q9NY99 539 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 ST3GAL5Q9UNP4 418 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 PPP2R2CQ9Y2T4 447 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 DAAM1Q9Y4D1 1078 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 ADGRG1Q9Y653 693 aa11.78□□□□□ -0.52
COL21A1-211ENST00000488912 EPN1Q9Y6I3 576 aaPredicted RBP11.78□□□□□ -0.52
COL21A1-211ENST00000488912 PHACTR2O75167 634 aa11.77□□□□□ -0.52
COL21A1-211ENST00000488912 SERPING1P05155 500 aa11.77□□□□□ -0.52
COL21A1-211ENST00000488912 TMEM191BP0C7N4 346 aa11.77□□□□□ -0.52
COL21A1-211ENST00000488912 EIF4A3P38919 411 aaKnown RBP11.77□□□□□ -0.52
COL21A1-211ENST00000488912 POU5F1Q01860 360 aaKnown RBP11.77□□□□□ -0.52
COL21A1-211ENST00000488912 NFX1Q12986 1120 aaKnown RBP11.77□□□□□ -0.52
COL21A1-211ENST00000488912 NCOA4Q13772 614 aa11.77□□□□□ -0.52
COL21A1-211ENST00000488912 TRAPPC11Q7Z392 1133 aa11.77□□□□□ -0.52
COL21A1-211ENST00000488912 IRF2BP2Q7Z5L9 587 aa11.77□□□□□ -0.52
COL21A1-211ENST00000488912 TMEM130Q8N3G9 435 aa11.77□□□□□ -0.52
COL21A1-211ENST00000488912 TATDN2Q93075 761 aa11.77□□□□□ -0.52
COL21A1-211ENST00000488912 KREMEN1Q96MU8 473 aa11.77□□□□□ -0.52
COL21A1-211ENST00000488912 CXCL16Q9H2A7 254 aa11.77□□□□□ -0.52
COL21A1-211ENST00000488912 AGO3Q9H9G7 860 aaKnown RBP11.77□□□□□ -0.52
COL21A1-211ENST00000488912 ZC3H11AO75152 810 aaKnown RBP eCLIP11.77□□□□□ -0.53
COL21A1-211ENST00000488912 GFPT2O94808 682 aa11.77□□□□□ -0.53
COL21A1-211ENST00000488912 CST3P01034 146 aaPredicted RBP11.77□□□□□ -0.53
COL21A1-211ENST00000488912 CCDC175P0C221 793 aa11.77□□□□□ -0.53
COL21A1-211ENST00000488912 GHRP10912 638 aa11.77□□□□□ -0.53
COL21A1-211ENST00000488912 SOX5P35711 763 aa11.77□□□□□ -0.53
COL21A1-211ENST00000488912 STAT1P42224 750 aa11.77□□□□□ -0.53
COL21A1-211ENST00000488912 FBXO47Q5MNV8 452 aa11.77□□□□□ -0.53
COL21A1-211ENST00000488912 ZNF618Q5T7W0 954 aa11.77□□□□□ -0.53
COL21A1-211ENST00000488912 TWF2Q6IBS0 349 aaKnown RBP11.77□□□□□ -0.53
COL21A1-211ENST00000488912 SPOPLQ6IQ16 392 aa11.77□□□□□ -0.53
COL21A1-211ENST00000488912 CCDC170Q8IYT3 715 aa11.77□□□□□ -0.53
COL21A1-211ENST00000488912 ANKRD36BP1Q96IX9 119 aa11.77□□□□□ -0.53
COL21A1-211ENST00000488912 CCDC42Q96M95 316 aa11.77□□□□□ -0.53
COL21A1-211ENST00000488912 ASB7Q9H672 318 aa11.77□□□□□ -0.53
COL21A1-211ENST00000488912 C1orf112Q9NSG2 853 aa11.77□□□□□ -0.53
COL21A1-211ENST00000488912 FOXN3O00409 490 aaPredicted RBP11.76□□□□□ -0.53
COL21A1-211ENST00000488912 EVI5O60447 810 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 TNNC2P02585 160 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 CKBP12277 381 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 KIF11P52732 1056 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 LBX1P52954 281 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 KLHL30Q0D2K2 578 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 WDR44Q5JSH3 913 aa11.76□□□□□ -0.53
COL21A1-211ENST00000488912 FBXO46Q6PJ61 603 aaPredicted RBP11.76□□□□□ -0.53
COL21A1-211ENST00000488912 ZNF333Q96JL9 665 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms