RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 PLEKHA5Q9HAU0 1116 aa13.35□□□□□ -0.27
TRAIP-209ENST00000488860 CNTN3Q9P232 1028 aa13.35□□□□□ -0.27
TRAIP-209ENST00000488860 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRAIP-209ENST00000488860 PTPRJQ12913 1337 aa13.35□□□□□ -0.27
TRAIP-209ENST00000488860 CEP290O15078 2479 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 PDE4DIPQ5VU43 2346 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 SCN1AP35498 2009 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 PTGESO14684 152 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 OFD1O75665 1012 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 SERPINC1P01008 464 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 TNNC2P02585 160 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 ZNF18P17022 549 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 AFF1P51825 1210 aaKnown RBP13.34□□□□□ -0.27
TRAIP-209ENST00000488860 MARSP56192 900 aaKnown RBP13.34□□□□□ -0.27
TRAIP-209ENST00000488860 RNASELQ05823 741 aaKnown RBP13.34□□□□□ -0.27
TRAIP-209ENST00000488860 SHHQ15465 462 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 MAN2A1Q16706 1144 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 NOMO2Q5JPE7 1267 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 WDR49Q8IV35 697 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 TRIM59Q8IWR1 403 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 TMC2Q8TDI7 906 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 PARD3BQ8TEW8 1205 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 TOP1MTQ969P6 601 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 BORCS6Q96GS4 357 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 ANKRD36BP1Q96IX9 119 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 ZMAT2Q96NC0 199 aaKnown RBP13.34□□□□□ -0.27
TRAIP-209ENST00000488860 SLC9A7Q96T83 725 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 YME1L1Q96TA2 773 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 TUBGCP2Q9BSJ2 902 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 ZBED2Q9BTP6 218 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 MTMR12Q9C0I1 747 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 VPS16Q9H269 839 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 ASB7Q9H672 318 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 MIOSQ9NXC5 875 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 TUBGCP4Q9UGJ1 667 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 PLAGL2Q9UPG8 496 aa13.34□□□□□ -0.27
TRAIP-209ENST00000488860 SMIM28A0A1B0GU29 152 aa13.33□□□□□ -0.28
TRAIP-209ENST00000488860 XPOTO43592 962 aaKnown RBP13.33□□□□□ -0.28
TRAIP-209ENST00000488860 STX10O60499 249 aa13.33□□□□□ -0.28
TRAIP-209ENST00000488860 AFPP02771 609 aaKnown RBP13.33□□□□□ -0.28
TRAIP-209ENST00000488860 THP07101 528 aa13.33□□□□□ -0.28
TRAIP-209ENST00000488860 ATP2A2P16615 1042 aaKnown RBP13.33□□□□□ -0.28
TRAIP-209ENST00000488860 GCLMP48507 274 aa13.33□□□□□ -0.28
TRAIP-209ENST00000488860 MXI1P50539 228 aa13.33□□□□□ -0.28
TRAIP-209ENST00000488860 GUCY2FP51841 1108 aa13.33□□□□□ -0.28
TRAIP-209ENST00000488860 MYL7Q01449 175 aa13.33□□□□□ -0.28
TRAIP-209ENST00000488860 POU5F1Q01860 360 aaKnown RBP13.33□□□□□ -0.28
TRAIP-209ENST00000488860 GRIK3Q13003 919 aa13.33□□□□□ -0.28
TRAIP-209ENST00000488860 BIRC3Q13489 604 aa13.33□□□□□ -0.28
TRAIP-209ENST00000488860 TMEM130Q8N3G9 435 aa13.33□□□□□ -0.28
TRAIP-209ENST00000488860 BEST2Q8NFU1 509 aa13.33□□□□□ -0.28
TRAIP-209ENST00000488860 OR5B17Q8NGF7 314 aa13.33□□□□□ -0.28
TRAIP-209ENST00000488860 SLC35C1Q96A29 364 aa13.33□□□□□ -0.28
TRAIP-209ENST00000488860 C18orf25Q96B23 403 aaPredicted RBP13.33□□□□□ -0.28
TRAIP-209ENST00000488860 CASD1Q96PB1 797 aa13.33□□□□□ -0.28
TRAIP-209ENST00000488860 FAM193BQ96PV7 902 aaPredicted RBP13.33□□□□□ -0.28
TRAIP-209ENST00000488860 GDF15Q99988 308 aa13.33□□□□□ -0.28
TRAIP-209ENST00000488860 TMEM117Q9H0C3 514 aa13.33□□□□□ -0.28
TRAIP-209ENST00000488860 GOLGA2P5Q9HBQ8 144 aa13.33□□□□□ -0.28
TRAIP-209ENST00000488860 LIMA1Q9UHB6 759 aaKnown RBP13.33□□□□□ -0.28
TRAIP-209ENST00000488860 CASTOR2A6NHX0 329 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 PHACTR2O75167 634 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 DGKIO75912 1065 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 KRT19P08727 400 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 KCNE1P15382 129 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 PIK3CAP42336 1068 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 COPB1P53618 953 aaKnown RBP13.32□□□□□ -0.28
TRAIP-209ENST00000488860 PPP3CAQ08209 521 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 KCNH2Q12809 1159 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 VWA3BQ502W6 1294 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 XKR4Q5GH76 650 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 C1orf220Q5T0J3 134 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 SPOUT1Q5T280 376 aaKnown RBP13.32□□□□□ -0.28
TRAIP-209ENST00000488860 ALKAL1Q6UXT8 129 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 HERC6Q8IVU3 1022 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 LRRC43Q8N309 656 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 CACTINQ8WUQ7 758 aaKnown RBP13.32□□□□□ -0.28
TRAIP-209ENST00000488860 PPP1R10Q96QC0 940 aaKnown RBP13.32□□□□□ -0.28
TRAIP-209ENST00000488860 MRPL9Q9BYD2 267 aaKnown RBP13.32□□□□□ -0.28
TRAIP-209ENST00000488860 SLC38A7Q9NVC3 462 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 TBC1D13Q9NVG8 400 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 INTS13Q9NVM9 706 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 HCSTQ9UBK5 93 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 CACNG4Q9UBN1 327 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 UBQLN1Q9UMX0 589 aaKnown RBP13.32□□□□□ -0.28
TRAIP-209ENST00000488860 DERAQ9Y315 318 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 C2CD2Q9Y426 696 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 TSC2P49815 1807 aa13.32□□□□□ -0.28
TRAIP-209ENST00000488860 TLL1O43897 1013 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 ZC3H11AO75152 810 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRAIP-209ENST00000488860 GJB5O95377 273 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 ITGB3P05106 788 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 FMO5P49326 533 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 FANCCQ00597 558 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 SOX4Q06945 474 aaPredicted RBP13.31□□□□□ -0.28
TRAIP-209ENST00000488860 ENPEPQ07075 957 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 BTG3Q14201 252 aaPredicted RBP13.31□□□□□ -0.28
TRAIP-209ENST00000488860 DUOXA2Q1HG44 320 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 FILIP1LQ4L180 1135 aa13.31□□□□□ -0.28
TRAIP-209ENST00000488860 CBWD6Q4V339 395 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms