RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 FAM170AA1A519 330 aa15.21■□□□□ 0.03
ABCB1-207ENST00000488737 SPATA31C2B4DYI2 1134 aa15.21■□□□□ 0.03
ABCB1-207ENST00000488737 C19orf81C9J6K1 198 aa15.21■□□□□ 0.03
ABCB1-207ENST00000488737 EGFRP00533 1210 aa15.21■□□□□ 0.03
ABCB1-207ENST00000488737 RARAP10276 462 aa15.21■□□□□ 0.03
ABCB1-207ENST00000488737 MAN1A1P33908 653 aa15.21■□□□□ 0.03
ABCB1-207ENST00000488737 SEC24CP53992 1094 aa15.21■□□□□ 0.03
ABCB1-207ENST00000488737 ACTR2P61160 394 aa15.21■□□□□ 0.03
ABCB1-207ENST00000488737 ADCY2Q08462 1091 aa15.21■□□□□ 0.03
ABCB1-207ENST00000488737 SYDE1Q6ZW31 735 aaPredicted RBP15.21■□□□□ 0.03
ABCB1-207ENST00000488737 CCDC60Q8IWA6 550 aaPredicted RBP15.21■□□□□ 0.03
ABCB1-207ENST00000488737 RNF25Q96BH1 459 aaPredicted RBP15.21■□□□□ 0.03
ABCB1-207ENST00000488737 BTBD6Q96KE9 485 aa15.21■□□□□ 0.03
ABCB1-207ENST00000488737 FAM213AQ9BRX8 229 aa15.21■□□□□ 0.03
ABCB1-207ENST00000488737 HACL1Q9UJ83 578 aa15.21■□□□□ 0.03
ABCB1-207ENST00000488737 C5orf60A6NFR6 353 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 ECEL1O95672 775 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 PIGRP01833 764 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 SUPT20HL2P0C7V6 817 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 RARGP13631 454 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 MAPK4P31152 587 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 LIG4P49917 911 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 SOX10P56693 466 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 SUPT20HL1Q3ZLR7 823 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 ZACNQ401N2 412 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 WDR44Q5JSH3 913 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 C6orf118Q5T5N4 469 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 MCOLN2Q8IZK6 566 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 NLGN2Q8NFZ4 835 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 CYFIP2Q96F07 1278 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 ACAD9Q9H845 621 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 PICK1Q9NRD5 415 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 CYP39A1Q9NYL5 469 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 WHRNQ9P202 907 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 ANAPC7Q9UJX3 599 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 MYPNQ86TC9 1320 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 TCRBV7S2A1N4TA0A589 114 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 SOCS7O14512 581 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 CAND2O75155 1236 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 PTPRAP18433 802 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 CENPCQ03188 943 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 PTP4A2Q12974 167 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 DALRD3Q5D0E6 543 aaKnown RBP15.2■□□□□ 0.02
ABCB1-207ENST00000488737 NBPF12Q5TAG4 269 aaPredicted RBP15.2■□□□□ 0.02
ABCB1-207ENST00000488737 PPP1R2P3Q6NXS1 205 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 TRIM72Q6ZMU5 477 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 OTUD6BQ8N6M0 293 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 ZNF516Q92618 1163 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 FNBP1Q96RU3 617 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 TEX13BQ9BXU2 312 aa15.2■□□□□ 0.02
ABCB1-207ENST00000488737 STMN4Q9H169 189 aaPredicted RBP15.2■□□□□ 0.02
ABCB1-207ENST00000488737 PPANQ9NQ55 473 aaKnown RBP15.2■□□□□ 0.02
ABCB1-207ENST00000488737 AGTP01019 485 aa15.19■□□□□ 0.02
ABCB1-207ENST00000488737 SHBGP04278 402 aa15.19■□□□□ 0.02
ABCB1-207ENST00000488737 CYP1A1P04798 512 aaPredicted RBP15.19■□□□□ 0.02
ABCB1-207ENST00000488737 TMOD1P28289 359 aa15.19■□□□□ 0.02
ABCB1-207ENST00000488737 STRN3Q13033 797 aa15.19■□□□□ 0.02
ABCB1-207ENST00000488737 CALCOCO2Q13137 446 aa15.19■□□□□ 0.02
ABCB1-207ENST00000488737 DRP2Q13474 957 aa15.19■□□□□ 0.02
ABCB1-207ENST00000488737 EMC2Q15006 297 aa15.19■□□□□ 0.02
ABCB1-207ENST00000488737 SLFN12LQ6IEE8 588 aa15.19■□□□□ 0.02
ABCB1-207ENST00000488737 CPNE8Q86YQ8 564 aa15.19■□□□□ 0.02
ABCB1-207ENST00000488737 MICALL2Q8IY33 904 aa15.19■□□□□ 0.02
ABCB1-207ENST00000488737 MICALL1Q8N3F8 863 aa15.19■□□□□ 0.02
ABCB1-207ENST00000488737 RAPGEF5Q92565 580 aa15.19■□□□□ 0.02
ABCB1-207ENST00000488737 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.19■□□□□ 0.02
ABCB1-207ENST00000488737 MROH7Q68CQ1 1323 aa15.19■□□□□ 0.02
ABCB1-207ENST00000488737 DCDC2CA8MYV0 355 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 RIPK2O43353 540 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 FSBPO95073 299 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 LDHAP00338 332 aaKnown RBP15.18■□□□□ 0.02
ABCB1-207ENST00000488737 HLA-DRAP01903 254 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 C4BPAP04003 597 aaKnown RBP15.18■□□□□ 0.02
ABCB1-207ENST00000488737 ICAM3P32942 547 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 MMP13P45452 471 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 SLC29A2Q14542 456 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 TMEM132BQ14DG7 1078 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 SGO2Q562F6 1265 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 C6orf89Q6UWU4 347 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 TRMT10CQ7L0Y3 403 aaKnown RBP15.18■□□□□ 0.02
ABCB1-207ENST00000488737 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.18■□□□□ 0.02
ABCB1-207ENST00000488737 PACS2Q86VP3 889 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 GRK7Q8WTQ7 553 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 PI4K2AQ9BTU6 479 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 FHDC1Q9C0D6 1143 aaPredicted RBP15.18■□□□□ 0.02
ABCB1-207ENST00000488737 A1CFQ9NQ94 594 aaKnown RBP15.18■□□□□ 0.02
ABCB1-207ENST00000488737 AGO2Q9UKV8 859 aaKnown RBP15.18■□□□□ 0.02
ABCB1-207ENST00000488737 UTRNP46939 3433 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 RGS16O15492 202 aaPredicted RBP15.18■□□□□ 0.02
ABCB1-207ENST00000488737 CLDN3O15551 220 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 ATG7O95352 703 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 NAMPTP43490 491 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 NSFP46459 744 aaKnown RBP15.18■□□□□ 0.02
ABCB1-207ENST00000488737 GMPSP49915 693 aaPredicted RBP15.18■□□□□ 0.02
ABCB1-207ENST00000488737 LIG3P49916 1009 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 POLGP54098 1239 aaPredicted RBP15.18■□□□□ 0.02
ABCB1-207ENST00000488737 PPP1R7Q15435 360 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 KCTD19Q17RG1 926 aaPredicted RBP15.18■□□□□ 0.02
ABCB1-207ENST00000488737 MTERF2Q49AM1 385 aa15.18■□□□□ 0.02
ABCB1-207ENST00000488737 ERMARDQ5T6L9 678 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms