RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 ADAM17P78536 824 aa21.79■■□□□ 1.08
NECAB3-213ENST00000488489 TRIM32Q13049 653 aa21.79■■□□□ 1.08
NECAB3-213ENST00000488489 KIZQ2M2Z5 673 aa21.79■■□□□ 1.08
NECAB3-213ENST00000488489 SPOPLQ6IQ16 392 aa21.79■■□□□ 1.08
NECAB3-213ENST00000488489 VPS36Q86VN1 386 aa21.79■■□□□ 1.08
NECAB3-213ENST00000488489 PALB2Q86YC2 1186 aa21.79■■□□□ 1.08
NECAB3-213ENST00000488489 DHX38Q92620 1227 aaKnown RBP21.79■■□□□ 1.08
NECAB3-213ENST00000488489 LUC7LQ9NQ29 371 aaKnown RBP21.79■■□□□ 1.08
NECAB3-213ENST00000488489 BUB1O43683 1085 aa21.78■■□□□ 1.08
NECAB3-213ENST00000488489 ZC3H11AO75152 810 aaKnown RBP eCLIP21.78■■□□□ 1.081e-11■■□□□ 13.5
NECAB3-213ENST00000488489 ATP1A1P05023 1023 aaKnown RBP21.78■■□□□ 1.08
NECAB3-213ENST00000488489 AMPD2Q01433 879 aa21.78■■□□□ 1.08
NECAB3-213ENST00000488489 C10orf76Q5T2E6 689 aa21.78■■□□□ 1.08
NECAB3-213ENST00000488489 RUFY4Q6ZNE9 571 aa21.78■■□□□ 1.08
NECAB3-213ENST00000488489 U2AF1L4Q8WU68 220 aaKnown RBP21.78■■□□□ 1.08
NECAB3-213ENST00000488489 FAM212AQ96EL1 285 aa21.78■■□□□ 1.08
NECAB3-213ENST00000488489 ADAMTS10Q9H324 1103 aa21.78■■□□□ 1.08
NECAB3-213ENST00000488489 PDZD7Q9H5P4 517 aa21.78■■□□□ 1.08
NECAB3-213ENST00000488489 HDAC6Q9UBN7 1215 aa21.78■■□□□ 1.08
NECAB3-213ENST00000488489 CYP26A1O43174 497 aa21.77■■□□□ 1.08
NECAB3-213ENST00000488489 SGPL1O95470 568 aa21.77■■□□□ 1.08
NECAB3-213ENST00000488489 PIK3CAP42336 1068 aa21.77■■□□□ 1.08
NECAB3-213ENST00000488489 ZNF200P98182 395 aaPredicted RBP21.77■■□□□ 1.08
NECAB3-213ENST00000488489 PURAQ00577 322 aaKnown RBP21.77■■□□□ 1.08
NECAB3-213ENST00000488489 GCNT1Q02742 428 aa21.77■■□□□ 1.08
NECAB3-213ENST00000488489 SCLT1Q96NL6 688 aa21.77■■□□□ 1.08
NECAB3-213ENST00000488489 CDHR5Q9HBB8 845 aa21.77■■□□□ 1.08
NECAB3-213ENST00000488489 DUSP11O75319 330 aaKnown RBP21.77■■□□□ 1.08
NECAB3-213ENST00000488489 FGFR4P22455 802 aa21.77■■□□□ 1.08
NECAB3-213ENST00000488489 ZNF410Q86VK4 478 aa21.77■■□□□ 1.08
NECAB3-213ENST00000488489 WDR49Q8IV35 697 aa21.77■■□□□ 1.08
NECAB3-213ENST00000488489 TXLNBQ8N3L3 684 aa21.77■■□□□ 1.08
NECAB3-213ENST00000488489 TRIM58Q8NG06 486 aa21.77■■□□□ 1.08
NECAB3-213ENST00000488489 APOBEC3GQ9HC16 384 aaKnown RBP21.77■■□□□ 1.08
NECAB3-213ENST00000488489 GINS2Q9Y248 185 aa21.77■■□□□ 1.08
NECAB3-213ENST00000488489 ANK1P16157 1881 aa21.76■■□□□ 1.07
NECAB3-213ENST00000488489 MEFVO15553 781 aaPredicted RBP21.76■■□□□ 1.07
NECAB3-213ENST00000488489 TSPAN1O60635 241 aa21.76■■□□□ 1.07
NECAB3-213ENST00000488489 GPR32O75388 356 aa21.76■■□□□ 1.07
NECAB3-213ENST00000488489 CST3P01034 146 aaPredicted RBP21.76■■□□□ 1.07
NECAB3-213ENST00000488489 SLC47A2Q86VL8 602 aa21.76■■□□□ 1.07
NECAB3-213ENST00000488489 EPS8L1Q8TE68 723 aa21.76■■□□□ 1.07
NECAB3-213ENST00000488489 AGPAT1Q99943 283 aa21.76■■□□□ 1.07
NECAB3-213ENST00000488489 MTMR12Q9C0I1 747 aa21.76■■□□□ 1.07
NECAB3-213ENST00000488489 C1orf112Q9NSG2 853 aa21.76■■□□□ 1.07
NECAB3-213ENST00000488489 CDC23Q9UJX2 597 aa21.76■■□□□ 1.07
NECAB3-213ENST00000488489 SMIM35A0A1B0GVV1 85 aa21.76■■□□□ 1.07
NECAB3-213ENST00000488489 TREHO43280 583 aa21.76■■□□□ 1.07
NECAB3-213ENST00000488489 C6orf222P0C671 652 aaPredicted RBP21.76■■□□□ 1.07
NECAB3-213ENST00000488489 CYP2C9P11712 490 aa21.76■■□□□ 1.07
NECAB3-213ENST00000488489 MFSD14CQ5VZR4 134 aa21.76■■□□□ 1.07
NECAB3-213ENST00000488489 CC2D1AQ6P1N0 951 aaPredicted RBP21.76■■□□□ 1.07
NECAB3-213ENST00000488489 RNF10Q8N5U6 811 aaKnown RBP21.76■■□□□ 1.07
NECAB3-213ENST00000488489 RABGGTAQ92696 567 aa21.76■■□□□ 1.07
NECAB3-213ENST00000488489 TAS2R14Q9NYV8 317 aa21.76■■□□□ 1.07
NECAB3-213ENST00000488489 NOCTQ9UK39 431 aaKnown RBP21.76■■□□□ 1.07
NECAB3-213ENST00000488489 FAM170AA1A519 330 aa21.75■■□□□ 1.07
NECAB3-213ENST00000488489 CCDC66A2RUB6 948 aa21.75■■□□□ 1.07
NECAB3-213ENST00000488489 TACC1O75410 805 aa21.75■■□□□ 1.07
NECAB3-213ENST00000488489 SEC31AO94979 1220 aaKnown RBP21.75■■□□□ 1.07
NECAB3-213ENST00000488489 CXCL8P10145 99 aa21.75■■□□□ 1.07
NECAB3-213ENST00000488489 TNFAIP3P21580 790 aa21.75■■□□□ 1.07
NECAB3-213ENST00000488489 NCOA4Q13772 614 aa21.75■■□□□ 1.07
NECAB3-213ENST00000488489 WDR44Q5JSH3 913 aa21.75■■□□□ 1.07
NECAB3-213ENST00000488489 TEX35Q5T0J7 233 aa21.75■■□□□ 1.07
NECAB3-213ENST00000488489 SRGAP1Q7Z6B7 1085 aa21.75■■□□□ 1.07
NECAB3-213ENST00000488489 NOP9Q86U38 636 aaKnown RBP21.75■■□□□ 1.07
NECAB3-213ENST00000488489 EFCAB13Q8IY85 973 aa21.75■■□□□ 1.07
NECAB3-213ENST00000488489 GOLGA1Q92805 767 aa21.75■■□□□ 1.07
NECAB3-213ENST00000488489 TMCO5BA8MYB1 307 aa21.74■■□□□ 1.07
NECAB3-213ENST00000488489 CHRNB2P17787 502 aa21.74■■□□□ 1.07
NECAB3-213ENST00000488489 SP3Q02447 781 aa21.74■■□□□ 1.07
NECAB3-213ENST00000488489 PAPD7Q5XG87 772 aaKnown RBP21.74■■□□□ 1.07
NECAB3-213ENST00000488489 TRAPPC11Q7Z392 1133 aa21.74■■□□□ 1.07
NECAB3-213ENST00000488489 NOX5Q96PH1 765 aa21.74■■□□□ 1.07
NECAB3-213ENST00000488489 UBXN6Q9BZV1 441 aa21.74■■□□□ 1.07
NECAB3-213ENST00000488489 RNF186Q9NXI6 227 aa21.74■■□□□ 1.07
NECAB3-213ENST00000488489 A0A1B0GUA9 196 aa21.74■■□□□ 1.07
NECAB3-213ENST00000488489 PGK1P00558 417 aa21.74■■□□□ 1.07
NECAB3-213ENST00000488489 STAG3L1P0CL83 205 aa21.74■■□□□ 1.07
NECAB3-213ENST00000488489 MCF2P10911 925 aa21.74■■□□□ 1.07
NECAB3-213ENST00000488489 GJA9P57773 515 aa21.74■■□□□ 1.07
NECAB3-213ENST00000488489 CACNB2Q08289 660 aaPredicted RBP21.74■■□□□ 1.07
NECAB3-213ENST00000488489 GNASQ5JWF2 1037 aa21.74■■□□□ 1.07
NECAB3-213ENST00000488489 DNAJB3Q8WWF6 145 aa21.74■■□□□ 1.07
NECAB3-213ENST00000488489 SEPT11Q9NVA2 429 aaKnown RBP21.74■■□□□ 1.07
NECAB3-213ENST00000488489 NUB1Q9Y5A7 615 aa21.74■■□□□ 1.07
NECAB3-213ENST00000488489 UMODL1Q5DID0 1318 aa21.74■■□□□ 1.07
NECAB3-213ENST00000488489 B4GALT4O60513 344 aa21.73■■□□□ 1.07
NECAB3-213ENST00000488489 PHACTR2O75167 634 aa21.73■■□□□ 1.07
NECAB3-213ENST00000488489 ERLIN2O94905 339 aa21.73■■□□□ 1.07
NECAB3-213ENST00000488489 AP3M2P53677 418 aa21.73■■□□□ 1.07
NECAB3-213ENST00000488489 GALCP54803 685 aa21.73■■□□□ 1.07
NECAB3-213ENST00000488489 NAP1L1P55209 391 aaKnown RBP21.73■■□□□ 1.07
NECAB3-213ENST00000488489 DUOXA2Q1HG44 320 aa21.73■■□□□ 1.07
NECAB3-213ENST00000488489 ENOSF1Q7L5Y1 443 aa21.73■■□□□ 1.07
NECAB3-213ENST00000488489 RPUSD2Q8IZ73 545 aaKnown RBP21.73■■□□□ 1.07
NECAB3-213ENST00000488489 OSMRQ99650 979 aa21.73■■□□□ 1.07
NECAB3-213ENST00000488489 EPC1Q9H2F5 836 aa21.73■■□□□ 1.07
NECAB3-213ENST00000488489 CREBZFQ9NS37 354 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms