RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 COLGALT2Q8IYK4 626 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 KLHL23Q8NBE8 558 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 ZSWIM2Q8NEG5 633 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 BEST2Q8NFU1 509 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 CACTINQ8WUQ7 758 aaKnown RBP17.08■□□□□ 0.32
C9orf3-219ENST00000488186 P2RX5Q93086 422 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 TMEM169Q96HH4 297 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 UROC1Q96N76 676 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 PPP1R10Q96QC0 940 aaKnown RBP17.08■□□□□ 0.32
C9orf3-219ENST00000488186 FNBP1Q96RU3 617 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 GAS2L1Q99501 681 aaPredicted RBP17.08■□□□□ 0.32
C9orf3-219ENST00000488186 CXCL16Q9H2A7 254 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 PRDM12Q9H4Q4 367 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 DACH1Q9UI36 760 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 PLAGL2Q9UPG8 496 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 PRG3Q9Y2Y8 225 aaPredicted RBP17.08■□□□□ 0.32
C9orf3-219ENST00000488186 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.08■□□□□ 0.32
C9orf3-219ENST00000488186 COL6A3P12111 3177 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 PRRC2BQ5JSZ5 2229 aaKnown RBP17.07■□□□□ 0.32
C9orf3-219ENST00000488186 H3BNC9 293 aa17.07■□□□□ 0.32
C9orf3-219ENST00000488186 CETN3O15182 167 aa17.07■□□□□ 0.32
C9orf3-219ENST00000488186 TADA2AO75478 443 aa17.07■□□□□ 0.32
C9orf3-219ENST00000488186 FGF18O76093 207 aa17.07■□□□□ 0.32
C9orf3-219ENST00000488186 NR2F2P24468 414 aa17.07■□□□□ 0.32
C9orf3-219ENST00000488186 CCNE1P24864 410 aa17.07■□□□□ 0.32
C9orf3-219ENST00000488186 JADE1Q6IE81 842 aa17.07■□□□□ 0.32
C9orf3-219ENST00000488186 CAVIN1Q6NZI2 390 aaKnown RBP17.07■□□□□ 0.32
C9orf3-219ENST00000488186 CBWD2Q8IUF1 395 aa17.07■□□□□ 0.32
C9orf3-219ENST00000488186 SLC9A9Q8IVB4 645 aa17.07■□□□□ 0.32
C9orf3-219ENST00000488186 BRSK2Q8IWQ3 736 aa17.07■□□□□ 0.32
C9orf3-219ENST00000488186 MLKLQ8NB16 471 aa17.07■□□□□ 0.32
C9orf3-219ENST00000488186 NELFBQ8WX92 580 aa17.07■□□□□ 0.32
C9orf3-219ENST00000488186 DDX27Q96GQ7 796 aaKnown RBP17.07■□□□□ 0.32
C9orf3-219ENST00000488186 ZMAT2Q96NC0 199 aaKnown RBP17.07■□□□□ 0.32
C9orf3-219ENST00000488186 UBQLN1Q9UMX0 589 aaKnown RBP17.07■□□□□ 0.32
C9orf3-219ENST00000488186 DERAQ9Y315 318 aa17.07■□□□□ 0.32
C9orf3-219ENST00000488186 R3HCC1Q9Y3T6 440 aaKnown RBP17.07■□□□□ 0.32
C9orf3-219ENST00000488186 PPP1R3GB7ZBB8 358 aa17.06■□□□□ 0.32
C9orf3-219ENST00000488186 RFXAPO00287 272 aa17.06■□□□□ 0.32
C9orf3-219ENST00000488186 IGFBP4P22692 258 aa17.06■□□□□ 0.32
C9orf3-219ENST00000488186 NLRP12P59046 1061 aa17.06■□□□□ 0.32
C9orf3-219ENST00000488186 LRRC63Q05C16 580 aa17.06■□□□□ 0.32
C9orf3-219ENST00000488186 DSC1Q08554 894 aa17.06■□□□□ 0.32
C9orf3-219ENST00000488186 BMS1Q14692 1282 aaKnown RBP17.06■□□□□ 0.32
C9orf3-219ENST00000488186 PTPROQ16827 1216 aa17.06■□□□□ 0.32
C9orf3-219ENST00000488186 EDRF1Q3B7T1 1238 aa17.06■□□□□ 0.32
C9orf3-219ENST00000488186 ANKRD40Q6AI12 368 aa17.06■□□□□ 0.32
C9orf3-219ENST00000488186 CENPPQ6IPU0 288 aa17.06■□□□□ 0.32
C9orf3-219ENST00000488186 MICAL1Q8TDZ2 1067 aa17.06■□□□□ 0.32
C9orf3-219ENST00000488186 GDPD5Q8WTR4 605 aa17.06■□□□□ 0.32
C9orf3-219ENST00000488186 C18orf25Q96B23 403 aaPredicted RBP17.06■□□□□ 0.32
C9orf3-219ENST00000488186 ALG13Q9NP73 1137 aaKnown RBP17.06■□□□□ 0.32
C9orf3-219ENST00000488186 DMAC2Q9NW81 257 aa17.06■□□□□ 0.32
C9orf3-219ENST00000488186 CTNND2Q9UQB3 1225 aa17.06■□□□□ 0.32
C9orf3-219ENST00000488186 KIAA1671Q9BY89 1806 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 LPXNO60711 386 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 ADRB2P07550 413 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 KRT13P13646 458 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 CD44P16070 742 aaKnown RBP17.05■□□□□ 0.32
C9orf3-219ENST00000488186 TNNI1P19237 187 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 BMP6P22004 513 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 RPL9P32969 192 aaKnown RBP17.05■□□□□ 0.32
C9orf3-219ENST00000488186 TFAMQ00059 246 aaKnown RBP17.05■□□□□ 0.32
C9orf3-219ENST00000488186 FKBP3Q00688 224 aaKnown RBP17.05■□□□□ 0.32
C9orf3-219ENST00000488186 PAK1Q13153 545 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 NFIL3Q16649 462 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 KLHL40Q2TBA0 621 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 DCLRE1AQ6PJP8 1040 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 USP37Q86T82 979 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 NT5DC4Q86YG4 428 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 SLC39A11Q8N1S5 342 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 RABGGTAQ92696 567 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 CCDC127Q96BQ5 260 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 IGSF21Q96ID5 467 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 ANKRD36BP1Q96IX9 119 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 FBXL18Q96ME1 805 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 LMAN2LQ9H0V9 348 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 GOLGA2P5Q9HBQ8 144 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 PDE11AQ9HCR9 933 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 STK39Q9UEW8 545 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 C2CD2Q9Y426 696 aa17.05■□□□□ 0.32
C9orf3-219ENST00000488186 TDRD15B5MCY1 1934 aaKnown RBP17.04■□□□□ 0.32
C9orf3-219ENST00000488186 EPOPA6NHQ4 379 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 PODXLO00592 558 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 MEFVO15553 781 aaPredicted RBP17.04■□□□□ 0.32
C9orf3-219ENST00000488186 B3GAT3O94766 335 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 CSPG5O95196 566 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 LETM1O95202 739 aaPredicted RBP17.04■□□□□ 0.32
C9orf3-219ENST00000488186 TNNC2P02585 160 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 ITGB1P05556 798 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 NFICP08651 508 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 TMEM191BP0C7N4 346 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 DLATP10515 647 aaKnown RBP17.04■□□□□ 0.32
C9orf3-219ENST00000488186 EPB41P11171 864 aaKnown RBP17.04■□□□□ 0.32
C9orf3-219ENST00000488186 FOSL2P15408 326 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 CYP3A5P20815 502 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 CA8P35219 290 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 PSMC2P35998 433 aaKnown RBP17.04■□□□□ 0.32
C9orf3-219ENST00000488186 CLCNKBP51801 687 aa17.04■□□□□ 0.32
C9orf3-219ENST00000488186 STX17P56962 302 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms