RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 BMT2Q1RMZ1 405 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 CBWD6Q4V339 395 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 CBWD3Q5JTY5 395 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 CBWD5Q5RIA9 395 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 SV2AQ7L0J3 742 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 NME8Q8N427 588 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 DDX56Q9NY93 547 aaKnown RBP12.55□□□□□ -0.4
TRA2B-214ENST00000487615 NUB1Q9Y5A7 615 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 M0QYV0 167 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 PDE2AO00408 941 aaPredicted RBP12.55□□□□□ -0.4
TRA2B-214ENST00000487615 GLI1P08151 1106 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 DSG3P32926 999 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 NAMPTP43490 491 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 BYSLQ13895 437 aaKnown RBP12.55□□□□□ -0.4
TRA2B-214ENST00000487615 SYDE1Q6ZW31 735 aaPredicted RBP12.55□□□□□ -0.4
TRA2B-214ENST00000487615 TTC39CQ8N584 583 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 OR2W6PQ8NHA6 318 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 POP1Q99575 1024 aaKnown RBP12.55□□□□□ -0.4
TRA2B-214ENST00000487615 TMEM150BA6NC51 233 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 FGFR4P22455 802 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 ARL4AP40617 200 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 SENP7Q9BQF6 1050 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 FGFBP2Q9BYJ0 223 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 PCSK1NQ9UHG2 260 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 CRYBG1Q9Y4K1 1723 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 MYH6P13533 1939 aa12.55□□□□□ -0.4
TRA2B-214ENST00000487615 EIF3HO15372 352 aaKnown RBP eCLIP12.54□□□□□ -0.4
TRA2B-214ENST00000487615 ZBED1O96006 694 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 TCF7P36402 384 aaPredicted RBP12.54□□□□□ -0.4
TRA2B-214ENST00000487615 MDH1P40925 334 aaKnown RBP12.54□□□□□ -0.4
TRA2B-214ENST00000487615 CYP24A1Q07973 514 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 PPP2R5DQ14738 602 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 IZUMO3Q5VZ72 239 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 NLRP14Q86W24 1093 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 HDAC7Q8WUI4 952 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 MTFR1LQ9H019 292 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 TTLL3Q9Y4R7 772 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 COMMD10Q9Y6G5 202 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 ADAMTS7Q9UKP4 1686 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 KLRG2A4D1S0 409 aaPredicted RBP12.54□□□□□ -0.4
TRA2B-214ENST00000487615 ITGB5P18084 799 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 CA4P22748 312 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 OAZ1P54368 228 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 ARL4CP56559 192 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 MAPK7Q13164 816 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 Q3C1V9 767 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 NUGGCQ68CJ6 796 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 SLC13A5Q86YT5 568 aaPredicted RBP12.54□□□□□ -0.4
TRA2B-214ENST00000487615 LRRC71Q8N4P6 559 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 SPIRE2Q8WWL2 714 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 TTC25Q96NG3 672 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 MAP2K7O14733 419 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 PLA2G6O60733 806 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 KCNJ1P48048 391 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 IRAK1P51617 712 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 GPS1Q13098 491 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 GDAP1Q8TB36 358 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 ARHGEF2Q92974 986 aaKnown RBP12.54□□□□□ -0.4
TRA2B-214ENST00000487615 MCUR1Q96AQ8 359 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 NCAPGQ9BPX3 1015 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 LRRC4Q9HBW1 653 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 CES2O00748 559 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 KRT3P12035 628 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 HSD17B3P37058 310 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 CUL2Q13617 745 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 PCGF5Q86SE9 256 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 RSPH3Q86UC2 560 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 CAVIN3Q969G5 261 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 TTYH3Q9C0H2 523 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 NIF3L1Q9GZT8 377 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 ACTR5Q9H9F9 607 aaPredicted RBP12.54□□□□□ -0.4
TRA2B-214ENST00000487615 SEPT10Q9P0V9 454 aa12.54□□□□□ -0.4
TRA2B-214ENST00000487615 RASA4BC9J798 803 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 PI4K2BG5E9Z4 385 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 RASA4O43374 803 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 GAS2O43903 313 aaKnown RBP12.53□□□□□ -0.4
TRA2B-214ENST00000487615 FECHP22830 423 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 MAGEA9P43362 315 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 FAM102AQ5T9C2 384 aaPredicted RBP12.53□□□□□ -0.4
TRA2B-214ENST00000487615 SRRM1Q8IYB3 904 aaKnown RBP12.53□□□□□ -0.4
TRA2B-214ENST00000487615 ANKRD13AQ8IZ07 590 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 C18orf8Q96DM3 657 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 TRAIPQ9BWF2 469 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 OSBPL8Q9BZF1 889 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 UBIAD1Q9Y5Z9 338 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 ASAP2O43150 1006 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 ITIH2P19823 946 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 SOX10P56693 466 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 KYAT1Q16773 422 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 ZCWPW2Q504Y3 356 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 SLC47A2Q86VL8 602 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 SCFD2Q8WU76 684 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 CDKL2Q92772 493 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 STK38LQ9Y2H1 464 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 ITGB4P16144 1822 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 TGFB1I1O43294 461 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 CPP00450 1065 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 PPP6R3Q5H9R7 873 aaPredicted RBP12.53□□□□□ -0.4
TRA2B-214ENST00000487615 ATF7IP2Q5U623 682 aa12.53□□□□□ -0.4
TRA2B-214ENST00000487615 TADA2BQ86TJ2 420 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms