RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 NTPCRQ9BSD7 190 aaKnown RBP13.39□□□□□ -0.27
VPS16-208ENST00000487461 RPP25Q9BUL9 199 aaKnown RBP13.39□□□□□ -0.27
VPS16-208ENST00000487461 CCDC94Q9BW85 323 aaPredicted RBP13.39□□□□□ -0.27
VPS16-208ENST00000487461 MRPL4Q9BYD3 311 aaKnown RBP13.39□□□□□ -0.27
VPS16-208ENST00000487461 KMT5AQ9NQR1 393 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 MTRRQ9UBK8 725 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 RBM19Q9Y4C8 960 aaKnown RBP13.39□□□□□ -0.27
VPS16-208ENST00000487461 DOCK8Q8NF50 2099 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 PHLPP2Q6ZVD8 1323 aa13.39□□□□□ -0.27
VPS16-208ENST00000487461 PTPRZ1P23471 2315 aaPredicted RBP13.38□□□□□ -0.27
VPS16-208ENST00000487461 STK25O00506 426 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 SLC16A4O15374 487 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 MEFVO15553 781 aaPredicted RBP13.38□□□□□ -0.27
VPS16-208ENST00000487461 ST18O60284 1047 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 SRFP11831 508 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 PROZP22891 400 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 YARSP54577 528 aaKnown RBP13.38□□□□□ -0.27
VPS16-208ENST00000487461 ATP2C1P98194 919 aaPredicted RBP13.38□□□□□ -0.27
VPS16-208ENST00000487461 HTR4Q13639 388 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 RABEP1Q15276 862 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 ZRSR1Q15695 479 aaKnown RBP13.38□□□□□ -0.27
VPS16-208ENST00000487461 UVSSAQ2YD98 709 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 ZNF568Q3ZCX4 644 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 AXDND1Q5T1B0 1012 aaPredicted RBP13.38□□□□□ -0.27
VPS16-208ENST00000487461 DTWD2Q8NBA8 298 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 ITFG1Q8TB96 612 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 SLC7A14Q8TBB6 771 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 GPR152Q8TDT2 470 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 TMX3Q96JJ7 454 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 SNX27Q96L92 541 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 DRC1Q96MC2 740 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 PLIN2Q99541 437 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 RTP3Q9BQQ7 232 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 TCHPQ9BT92 498 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 C17orf75Q9HAS0 396 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 CDH7Q9ULB5 785 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 CA14Q9ULX7 337 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 GTF3C3Q9Y5Q9 886 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 BACE2Q9Y5Z0 518 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 CDY1Q9Y6F8 540 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 NUMBLQ9Y6R0 609 aa13.38□□□□□ -0.27
VPS16-208ENST00000487461 CD2BP2O95400 341 aaKnown RBP13.37□□□□□ -0.27
VPS16-208ENST00000487461 MCF2P10911 925 aa13.37□□□□□ -0.27
VPS16-208ENST00000487461 GUCY2CP25092 1073 aa13.37□□□□□ -0.27
VPS16-208ENST00000487461 HOXA9P31269 272 aa13.37□□□□□ -0.27
VPS16-208ENST00000487461 NBL1P41271 181 aa13.37□□□□□ -0.27
VPS16-208ENST00000487461 RAD51AP2Q09MP3 1159 aa13.37□□□□□ -0.27
VPS16-208ENST00000487461 RILPL1Q5EBL4 403 aa13.37□□□□□ -0.27
VPS16-208ENST00000487461 HYIQ5T013 277 aa13.37□□□□□ -0.27
VPS16-208ENST00000487461 PARM1Q6UWI2 310 aa13.37□□□□□ -0.27
VPS16-208ENST00000487461 MPZL3Q6UWV2 235 aa13.37□□□□□ -0.27
VPS16-208ENST00000487461 ASCL5Q7RTU5 278 aa13.37□□□□□ -0.27
VPS16-208ENST00000487461 CCDC105Q8IYK2 499 aa13.37□□□□□ -0.27
VPS16-208ENST00000487461 FGF14Q92915 247 aa13.37□□□□□ -0.27
VPS16-208ENST00000487461 DDX27Q96GQ7 796 aaKnown RBP13.37□□□□□ -0.27
VPS16-208ENST00000487461 ACAP3Q96P50 834 aa13.37□□□□□ -0.27
VPS16-208ENST00000487461 TOPORSQ9NS56 1045 aaPredicted RBP13.37□□□□□ -0.27
VPS16-208ENST00000487461 HCFC1R1Q9NWW0 138 aa13.37□□□□□ -0.27
VPS16-208ENST00000487461 DNMT3BQ9UBC3 853 aaKnown RBP13.37□□□□□ -0.27
VPS16-208ENST00000487461 POLIQ9UNA4 740 aa13.37□□□□□ -0.27
VPS16-208ENST00000487461 ZFP37Q9Y6Q3 630 aaPredicted RBP13.37□□□□□ -0.27
VPS16-208ENST00000487461 VWA8A3KMH1 1905 aa13.37□□□□□ -0.27
VPS16-208ENST00000487461 TRIP11Q15643 1979 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 NPHP3-ACAD11A0A0J9YXS1 232 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 PODXLO00592 558 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 TRAPPC3O43617 180 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 XYLBO75191 536 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 PLS3P13797 630 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 KCNE1P15382 129 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 GJB2P29033 226 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 SLC12A3P55017 1021 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 GPC5P78333 572 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 SLC10A6Q3KNW5 377 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 ANKS3Q6ZW76 656 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 FRMD5Q7Z6J6 570 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 SYT2Q8N9I0 419 aaPredicted RBP13.36□□□□□ -0.27
VPS16-208ENST00000487461 TMEM161BQ8NDZ6 487 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 SPIRE2Q8WWL2 714 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 FGF13Q92913 245 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 C18orf25Q96B23 403 aaPredicted RBP13.36□□□□□ -0.27
VPS16-208ENST00000487461 TIPINQ9BVW5 301 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 TBC1D17Q9HA65 648 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 SLC2A4RGQ9NR83 387 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 SLC38A7Q9NVC3 462 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 KIF3AQ9Y496 699 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 USP34Q70CQ2 3546 aa13.36□□□□□ -0.27
VPS16-208ENST00000487461 VWA3AA6NCI4 1184 aa13.35□□□□□ -0.27
VPS16-208ENST00000487461 TBC1D4O60343 1298 aa13.35□□□□□ -0.27
VPS16-208ENST00000487461 POU2F2P09086 479 aa13.35□□□□□ -0.27
VPS16-208ENST00000487461 PLA2G4BP0C869 781 aa13.35□□□□□ -0.27
VPS16-208ENST00000487461 MAPTP10636 758 aaKnown RBP13.35□□□□□ -0.27
VPS16-208ENST00000487461 HARSP12081 509 aaKnown RBP13.35□□□□□ -0.27
VPS16-208ENST00000487461 ANGPT1Q15389 498 aa13.35□□□□□ -0.27
VPS16-208ENST00000487461 SEZ6Q53EL9 994 aa13.35□□□□□ -0.27
VPS16-208ENST00000487461 ARSHQ5FYA8 562 aa13.35□□□□□ -0.27
VPS16-208ENST00000487461 VARS2Q5ST30 1063 aaKnown RBP13.35□□□□□ -0.27
VPS16-208ENST00000487461 SLC8B1Q6J4K2 584 aa13.35□□□□□ -0.27
VPS16-208ENST00000487461 RTL10Q7L3V2 364 aa13.35□□□□□ -0.27
VPS16-208ENST00000487461 KCTD17Q8N5Z5 321 aa13.35□□□□□ -0.27
VPS16-208ENST00000487461 CNTN3Q9P232 1028 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms