RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, human

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRDM2-208	ENST00000487453	FKBP3	Q00688	224 aa	Known RBP	13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	TYRO3	Q06418	890 aa		13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	CYP24A1	Q07973	514 aa		13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	TUSC3	Q13454	348 aa		13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	MYBPC2	Q14324	1141 aa		13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	TPD52L1	Q16890	204 aa	Predicted RBP	13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	XKR4	Q5GH76	650 aa		13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	ZNF697	Q5TEC3	545 aa		13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	TTI2	Q6NXR4	508 aa		13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	ALKAL1	Q6UXT8	129 aa		13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	FAM186B	Q8IYM0	893 aa		13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	CSGALNACT2	Q8N6G5	542 aa		13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	ARNTL2	Q8WYA1	636 aa		13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	C18orf25	Q96B23	403 aa	Predicted RBP	13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	CCDC127	Q96BQ5	260 aa		13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	FBXL18	Q96ME1	805 aa		13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	SAMD11	Q96NU1	681 aa		13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	PPP1R10	Q96QC0	940 aa	Known RBP	13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	FNBP1	Q96RU3	617 aa		13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	DMAC2	Q9NW81	257 aa		13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	PCDHB12	Q9Y5F1	795 aa		13.84	□□□□□ -0.19
PRDM2-208	ENST00000487453	PLXNA4	Q9HCM2	1894 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	NT5C1B-RDH14	C9J2C7	533 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	AKAP3	O75969	853 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	TMEM191B	P0C7N4	346 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	EPB41	P11171	864 aa	Known RBP	13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	KRT13	P13646	458 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	SLC11A1	P49279	550 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	TFAM	Q00059	246 aa	Known RBP	13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	POU5F1	Q01860	360 aa	Known RBP	13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	DSC1	Q08554	894 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	PSMD6	Q15008	389 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	SURF1	Q15526	300 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	NAB2	Q15742	525 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	ZSCAN23	Q3MJ62	389 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	EPC2	Q52LR7	807 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	KCNT2	Q6UVM3	1135 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	EFCAB13	Q8IY85	973 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	COLGALT2	Q8IYK4	626 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	FBXO22	Q8NEZ5	403 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	BEST2	Q8NFU1	509 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	TMEM174	Q8WUU8	243 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	RABGGTA	Q92696	567 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	CLP1	Q92989	425 aa	Known RBP	13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	TMEM175	Q9BSA9	504 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	DNAJC25	Q9H1X3	360 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	ZNF576	Q9H609	170 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	UBQLN1	Q9UMX0	589 aa	Known RBP	13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	DERA	Q9Y315	318 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	C2CD2	Q9Y426	696 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	TRIP11	Q15643	1979 aa		13.83	□□□□□ -0.2
PRDM2-208	ENST00000487453	TMEM265	A0A087WTH1	108 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	NRP1	O14786	923 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	SLC16A3	O15427	465 aa	Known RBP	13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	CSPG5	O95196	566 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	LINC00271	P0C7V0	271 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	CCDC192	P0DO97	292 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	TNNI1	P19237	187 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	PPM1A	P35813	382 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	BMPR1A	P36894	532 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	CLCNKB	P51801	687 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	GUCY2F	P51841	1108 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	ERVK-21	P61565	698 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	SOX4	Q06945	474 aa	Predicted RBP	13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	CCDC40	Q4G0X9	1142 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	WDR49	Q8IV35	697 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	HASPIN	Q8TF76	798 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	FAM161B	Q96MY7	647 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	UROC1	Q96N76	676 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	TSPAN18	Q96SJ8	248 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	CGRRF1	Q99675	332 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	DUSP9	Q99956	384 aa	Known RBP	13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	PAAF1	Q9BRP4	392 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	MKNK1	Q9BUB5	465 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	MTMR12	Q9C0I1	747 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	GZF1	Q9H116	711 aa	Predicted RBP	13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	FAN1	Q9Y2M0	1017 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	LAMA2	P24043	3122 aa	Known RBP	13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	PTPRJ	Q12913	1337 aa		13.82	□□□□□ -0.2
PRDM2-208	ENST00000487453	CARNS1	A5YM72	827 aa		13.81	□□□□□ -0.2
PRDM2-208	ENST00000487453	KIF4A	O95239	1232 aa		13.81	□□□□□ -0.2
PRDM2-208	ENST00000487453	FGFR1OP	O95684	399 aa	Known RBP	13.81	□□□□□ -0.2
PRDM2-208	ENST00000487453	TNNC2	P02585	160 aa		13.81	□□□□□ -0.2
PRDM2-208	ENST00000487453	ALDH2	P05091	517 aa		13.81	□□□□□ -0.2
PRDM2-208	ENST00000487453	GALT	P07902	379 aa		13.81	□□□□□ -0.2
PRDM2-208	ENST00000487453	ERCC5	P28715	1186 aa	Predicted RBP	13.81	□□□□□ -0.2
PRDM2-208	ENST00000487453	VAMP7	P51809	220 aa		13.81	□□□□□ -0.2
PRDM2-208	ENST00000487453	BFSP1	Q12934	665 aa		13.81	□□□□□ -0.2
PRDM2-208	ENST00000487453	ANO6	Q4KMQ2	910 aa		13.81	□□□□□ -0.2
PRDM2-208	ENST00000487453	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.81	□□□□□ -0.2
PRDM2-208	ENST00000487453	FOXR2	Q6PJQ5	311 aa		13.81	□□□□□ -0.2
PRDM2-208	ENST00000487453	INTS8	Q75QN2	995 aa	Known RBP	13.81	□□□□□ -0.2
PRDM2-208	ENST00000487453	USP37	Q86T82	979 aa		13.81	□□□□□ -0.2
PRDM2-208	ENST00000487453	NT5DC4	Q86YG4	428 aa		13.81	□□□□□ -0.2
PRDM2-208	ENST00000487453	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.81	□□□□□ -0.2
PRDM2-208	ENST00000487453	SLC39A11	Q8N1S5	342 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms