RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 PROZP22891 400 aa26.9■■□□□ 1.9
LIME1-206ENST00000487026 TKTP29401 623 aaKnown RBP26.9■■□□□ 1.9
LIME1-206ENST00000487026 MCM2P49736 904 aa26.9■■□□□ 1.9
LIME1-206ENST00000487026 SLC12A3P55017 1021 aa26.9■■□□□ 1.9
LIME1-206ENST00000487026 SEZ6Q53EL9 994 aa26.9■■□□□ 1.9
LIME1-206ENST00000487026 ARL6IP4Q66PJ3 421 aaKnown RBP26.9■■□□□ 1.9
LIME1-206ENST00000487026 ASTLQ6HA08 431 aaPredicted RBP26.9■■□□□ 1.9
LIME1-206ENST00000487026 RSPO2Q6UXX9 243 aaPredicted RBP26.9■■□□□ 1.9
LIME1-206ENST00000487026 GRASPQ7Z6J2 395 aaPredicted RBP26.9■■□□□ 1.9
LIME1-206ENST00000487026 FLCNQ8NFG4 579 aa26.9■■□□□ 1.9
LIME1-206ENST00000487026 UROC1Q96N76 676 aa26.9■■□□□ 1.9
LIME1-206ENST00000487026 ACAP3Q96P50 834 aa26.9■■□□□ 1.9
LIME1-206ENST00000487026 DUSP12Q9UNI6 340 aa26.9■■□□□ 1.9
LIME1-206ENST00000487026 H0Y858 1186 aa26.89■■□□□ 1.9
LIME1-206ENST00000487026 MEFVO15553 781 aaPredicted RBP26.89■■□□□ 1.9
LIME1-206ENST00000487026 C8AP07357 584 aa26.89■■□□□ 1.9
LIME1-206ENST00000487026 NTHL1P78549 312 aa26.89■■□□□ 1.9
LIME1-206ENST00000487026 TMEM119Q4V9L6 283 aa26.89■■□□□ 1.9
LIME1-206ENST00000487026 ARSHQ5FYA8 562 aa26.89■■□□□ 1.9
LIME1-206ENST00000487026 PPM1LQ5SGD2 360 aa26.89■■□□□ 1.9
LIME1-206ENST00000487026 LIN9Q5TKA1 542 aa26.89■■□□□ 1.9
LIME1-206ENST00000487026 PDXDC1Q6P996 788 aa26.89■■□□□ 1.9
LIME1-206ENST00000487026 MPZL3Q6UWV2 235 aa26.89■■□□□ 1.9
LIME1-206ENST00000487026 TMEM161BQ8NDZ6 487 aa26.89■■□□□ 1.9
LIME1-206ENST00000487026 SPIRE2Q8WWL2 714 aa26.89■■□□□ 1.9
LIME1-206ENST00000487026 SNX27Q96L92 541 aa26.89■■□□□ 1.9
LIME1-206ENST00000487026 TBC1D32Q96NH3 1257 aa26.89■■□□□ 1.9
LIME1-206ENST00000487026 DAXXQ9UER7 740 aaPredicted RBP26.89■■□□□ 1.9
LIME1-206ENST00000487026 FBXL21Q9UKT6 434 aa26.89■■□□□ 1.9
LIME1-206ENST00000487026 CCL16O15467 120 aa26.88■■□□□ 1.89
LIME1-206ENST00000487026 LAMP2P13473 410 aa26.88■■□□□ 1.89
LIME1-206ENST00000487026 SMTNP53814 917 aa26.88■■□□□ 1.89
LIME1-206ENST00000487026 STRN3Q13033 797 aa26.88■■□□□ 1.89
LIME1-206ENST00000487026 RAB33AQ14088 237 aa26.88■■□□□ 1.89
LIME1-206ENST00000487026 SLC44A3Q8N4M1 653 aa26.88■■□□□ 1.89
LIME1-206ENST00000487026 C18orf25Q96B23 403 aaPredicted RBP26.88■■□□□ 1.89
LIME1-206ENST00000487026 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.88■■□□□ 1.89
LIME1-206ENST00000487026 ANKFY1Q9P2R3 1169 aa26.88■■□□□ 1.89
LIME1-206ENST00000487026 POLIQ9UNA4 740 aa26.88■■□□□ 1.89
LIME1-206ENST00000487026 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.88■■□□□ 1.89
LIME1-206ENST00000487026 CDY1Q9Y6F8 540 aa26.88■■□□□ 1.89
LIME1-206ENST00000487026 DOCK6Q96HP0 2047 aa26.88■■□□□ 1.89
LIME1-206ENST00000487026 GALR2O43603 387 aaPredicted RBP26.87■■□□□ 1.89
LIME1-206ENST00000487026 CFHP08603 1231 aa26.87■■□□□ 1.89
LIME1-206ENST00000487026 MAPTP10636 758 aaKnown RBP26.87■■□□□ 1.89
LIME1-206ENST00000487026 FSHRP23945 695 aa26.87■■□□□ 1.89
LIME1-206ENST00000487026 DHX8Q14562 1220 aaKnown RBP26.87■■□□□ 1.89
LIME1-206ENST00000487026 SIX5Q8N196 739 aa26.87■■□□□ 1.89
LIME1-206ENST00000487026 SLC7A14Q8TBB6 771 aa26.87■■□□□ 1.89
LIME1-206ENST00000487026 LRRC15Q8TF66 581 aa26.87■■□□□ 1.89
LIME1-206ENST00000487026 ATOH1Q92858 354 aaPredicted RBP26.87■■□□□ 1.89
LIME1-206ENST00000487026 DDX27Q96GQ7 796 aaKnown RBP26.87■■□□□ 1.89
LIME1-206ENST00000487026 MTRRQ9UBK8 725 aa26.87■■□□□ 1.89
LIME1-206ENST00000487026 DOCK8Q8NF50 2099 aa26.86■■□□□ 1.89
LIME1-206ENST00000487026 PODXLO00592 558 aa26.86■■□□□ 1.89
LIME1-206ENST00000487026 TRAPPC3O43617 180 aa26.86■■□□□ 1.89
LIME1-206ENST00000487026 PI15O43692 258 aa26.86■■□□□ 1.89
LIME1-206ENST00000487026 KCNE1P15382 129 aa26.86■■□□□ 1.89
LIME1-206ENST00000487026 NPR3P17342 541 aa26.86■■□□□ 1.89
LIME1-206ENST00000487026 AXDND1Q5T1B0 1012 aaPredicted RBP26.86■■□□□ 1.89
LIME1-206ENST00000487026 CWF19L1Q69YN2 538 aaKnown RBP26.86■■□□□ 1.89
LIME1-206ENST00000487026 KCTD17Q8N5Z5 321 aa26.86■■□□□ 1.89
LIME1-206ENST00000487026 SLC38A7Q9NVC3 462 aa26.86■■□□□ 1.89
LIME1-206ENST00000487026 CACNA1HO95180 2353 aa26.85■■□□□ 1.89
LIME1-206ENST00000487026 TOM1L1O75674 476 aa26.85■■□□□ 1.89
LIME1-206ENST00000487026 HNRNPA1P09651 372 aaKnown RBP eCLIP26.85■■□□□ 1.89
LIME1-206ENST00000487026 GRIN1Q05586 938 aa26.85■■□□□ 1.89
LIME1-206ENST00000487026 CNTN3Q9P232 1028 aa26.85■■□□□ 1.89
LIME1-206ENST00000487026 KCNG1Q9UIX4 513 aa26.85■■□□□ 1.89
LIME1-206ENST00000487026 UBA7P41226 1012 aa26.84■■□□□ 1.89
LIME1-206ENST00000487026 CLCN5P51795 746 aa26.84■■□□□ 1.89
LIME1-206ENST00000487026 NUBP1P53384 320 aa26.84■■□□□ 1.89
LIME1-206ENST00000487026 NOLC1Q14978 699 aaKnown RBP eCLIP26.84■■□□□ 1.89
LIME1-206ENST00000487026 SLC10A6Q3KNW5 377 aa26.84■■□□□ 1.89
LIME1-206ENST00000487026 TMEM130Q8N3G9 435 aa26.84■■□□□ 1.89
LIME1-206ENST00000487026 AK8Q96MA6 479 aa26.84■■□□□ 1.89
LIME1-206ENST00000487026 HAPLN2Q9GZV7 340 aa26.84■■□□□ 1.89
LIME1-206ENST00000487026 HCFC1R1Q9NWW0 138 aa26.84■■□□□ 1.89
LIME1-206ENST00000487026 KCND2Q9NZV8 630 aa26.84■■□□□ 1.89
LIME1-206ENST00000487026 BACE2Q9Y5Z0 518 aa26.84■■□□□ 1.89
LIME1-206ENST00000487026 MYH11P35749 1972 aa26.84■■□□□ 1.89
LIME1-206ENST00000487026 MATR3P43243 847 aaKnown RBP eCLIP26.83■■□□□ 1.89
LIME1-206ENST00000487026 ANKS3Q6ZW76 656 aa26.83■■□□□ 1.89
LIME1-206ENST00000487026 GPBP1Q86WP2 473 aa26.83■■□□□ 1.89
LIME1-206ENST00000487026 CALML4Q96GE6 196 aa26.83■■□□□ 1.89
LIME1-206ENST00000487026 REEP2Q9BRK0 252 aa26.83■■□□□ 1.89
LIME1-206ENST00000487026 CA14Q9ULX7 337 aa26.83■■□□□ 1.89
LIME1-206ENST00000487026 KRBA1A5PL33 1030 aa26.82■■□□□ 1.88
LIME1-206ENST00000487026 ANHXE9PGG2 379 aa26.82■■□□□ 1.88
LIME1-206ENST00000487026 CLDN3O15551 220 aa26.82■■□□□ 1.88
LIME1-206ENST00000487026 XYLBO75191 536 aa26.82■■□□□ 1.88
LIME1-206ENST00000487026 NCKAP1LP55160 1127 aa26.82■■□□□ 1.88
LIME1-206ENST00000487026 SPAG1Q07617 926 aa26.82■■□□□ 1.88
LIME1-206ENST00000487026 HTR4Q13639 388 aa26.82■■□□□ 1.88
LIME1-206ENST00000487026 SF3A1Q15459 793 aaKnown RBP26.82■■□□□ 1.88
LIME1-206ENST00000487026 UVSSAQ2YD98 709 aa26.82■■□□□ 1.88
LIME1-206ENST00000487026 VARS2Q5ST30 1063 aaKnown RBP26.82■■□□□ 1.88
LIME1-206ENST00000487026 ZPBP2Q6X784 338 aa26.82■■□□□ 1.88
LIME1-206ENST00000487026 HAUS6Q7Z4H7 955 aa26.82■■□□□ 1.88
LIME1-206ENST00000487026 ITFG1Q8TB96 612 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms