RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 AGO2Q9UKV8 859 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 ATP8A1Q9Y2Q0 1164 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 PCDHB2Q9Y5E7 798 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 PPP2R3BQ9Y5P8 575 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 MYH9P35579 1960 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 EBAG9O00559 213 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 HLA-DRAP01903 254 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 C4BPAP04003 597 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 GLRA2P23416 452 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 NAMPTP43490 491 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 NLRP11P59045 1033 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 SIX1Q15475 284 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 SH3D19Q5HYK7 790 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 LMBRD2Q68DH5 695 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 ASAP3Q8TDY4 903 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 ZNF526Q8TF50 670 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 TMEM143Q96AN5 459 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 EPN3Q9H201 632 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 RABEP2Q9H5N1 569 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 AVENQ9NQS1 362 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 GRHL1Q9NZI5 618 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 SIP14410 1827 aa19.24■□□□□ 0.67
PDLIM7-207ENST00000486828 TCRBV7S2A1N4TA0A589 114 aa19.24■□□□□ 0.67
PDLIM7-207ENST00000486828 MYBL1P10243 752 aa19.24■□□□□ 0.67
PDLIM7-207ENST00000486828 TNNI1P19237 187 aa19.24■□□□□ 0.67
PDLIM7-207ENST00000486828 HPDP32754 393 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-207ENST00000486828 ARL2P36404 184 aa19.24■□□□□ 0.67
PDLIM7-207ENST00000486828 COILP38432 576 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-207ENST00000486828 PLTPP55058 493 aa19.24■□□□□ 0.67
PDLIM7-207ENST00000486828 BPIFB4P59827 614 aa19.24■□□□□ 0.67
PDLIM7-207ENST00000486828 TDRD10Q5VZ19 366 aaKnown RBP19.24■□□□□ 0.67
PDLIM7-207ENST00000486828 SLFN12LQ6IEE8 588 aa19.24■□□□□ 0.67
PDLIM7-207ENST00000486828 MCOLN2Q8IZK6 566 aa19.24■□□□□ 0.67
PDLIM7-207ENST00000486828 C12orf50Q8NA57 414 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-207ENST00000486828 GGA3Q9NZ52 723 aa19.24■□□□□ 0.67
PDLIM7-207ENST00000486828 PARP2Q9UGN5 583 aa19.24■□□□□ 0.67
PDLIM7-207ENST00000486828 FEZ2Q9UHY8 353 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-207ENST00000486828 WDR90Q96KV7 1748 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 GLTPD2A6NH11 291 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 SRRM3A6NNA2 597 aaPredicted RBP19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 CALCAP01258 141 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 MAPK4P31152 587 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 PIK3CAP42336 1068 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 WNT7BP56706 349 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 CORO7P57737 925 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 PTGISQ16647 500 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 CRELD2Q6UXH1 353 aaPredicted RBP19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 DEPTORQ8TB45 409 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 FBXO25Q8TCJ0 367 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 TRIM11Q96F44 468 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 NIFKQ9BYG3 293 aaKnown RBP19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 HAPLN2Q9GZV7 340 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 ANAPC7Q9UJX3 599 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 IGKV6D-21A0A0A0MT36 114 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 NDUFAB1O14561 156 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 TRIM66O15016 1216 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 RARAP10276 462 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 RPL21P46778 160 aaKnown RBP19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 FNTAP49354 379 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 ACOT2P49753 483 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 PMS2P54278 862 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 L3MBTL3Q96JM7 780 aaPredicted RBP19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 CEP89Q96ST8 783 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 PLVAPQ9BX97 442 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 FAM107BQ9H098 131 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 EPB41L4BQ9H329 900 aa19.23■□□□□ 0.67
PDLIM7-207ENST00000486828 PTPRJQ12913 1337 aa19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 LRRIQ4A6NIV6 560 aa19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 K7ERI5 159 aa19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 VNN1O95497 513 aa19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 LDHAP00338 332 aaKnown RBP19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 CYP1A1P04798 512 aaPredicted RBP19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 NUDT17P0C025 328 aa19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 CNTN2Q02246 1040 aa19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 IFFO1Q0D2I5 559 aa19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 FSTL1Q12841 308 aa19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 KRT71Q3SY84 523 aa19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 C10orf67Q8IYJ2 551 aa19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 CCDC105Q8IYK2 499 aa19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 ANKRD35Q8N283 1001 aa19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.22■□□□□ 0.672e-7■■□□□ 11.8
PDLIM7-207ENST00000486828 SLC7A3Q8WY07 619 aa19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 PABPC3Q9H361 631 aaKnown RBP19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 RBAKQ9NYW8 714 aaPredicted RBP19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 BCCIPQ9P287 314 aaKnown RBP eCLIP19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 SLC12A6Q9UHW9 1150 aa19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 MROH7Q68CQ1 1323 aa19.22■□□□□ 0.67
PDLIM7-207ENST00000486828 FSCN2O14926 492 aa19.21■□□□□ 0.67
PDLIM7-207ENST00000486828 ALDH5A1P51649 535 aaPredicted RBP19.21■□□□□ 0.67
PDLIM7-207ENST00000486828 SEPT14Q6ZU15 432 aa19.21■□□□□ 0.67
PDLIM7-207ENST00000486828 ZBTB45Q96K62 511 aaPredicted RBP19.21■□□□□ 0.67
PDLIM7-207ENST00000486828 LRRC19Q9H756 370 aa19.21■□□□□ 0.67
PDLIM7-207ENST00000486828 NOVA2Q9UNW9 492 aaKnown RBP19.21■□□□□ 0.67
PDLIM7-207ENST00000486828 ACO1P21399 889 aaKnown RBP19.21■□□□□ 0.67
PDLIM7-207ENST00000486828 RFC5P40937 340 aa19.21■□□□□ 0.67
PDLIM7-207ENST00000486828 SLC1A1P43005 524 aa19.21■□□□□ 0.67
PDLIM7-207ENST00000486828 CENPCQ03188 943 aa19.21■□□□□ 0.67
PDLIM7-207ENST00000486828 SPOPLQ6IQ16 392 aa19.21■□□□□ 0.67
PDLIM7-207ENST00000486828 CPA5Q8WXQ8 436 aa19.21■□□□□ 0.67
PDLIM7-207ENST00000486828 CGRRF1Q99675 332 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms