RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 ITGA4P13612 1032 aa13.88□□□□□ -0.19
HDAC6-229ENST00000486665 ATP1A3P13637 1013 aa13.88□□□□□ -0.19
HDAC6-229ENST00000486665 RAB27AP51159 221 aa13.88□□□□□ -0.19
HDAC6-229ENST00000486665 KYAT1Q16773 422 aa13.88□□□□□ -0.19
HDAC6-229ENST00000486665 C1orf220Q5T0J3 134 aa13.88□□□□□ -0.19
HDAC6-229ENST00000486665 ALKAL1Q6UXT8 129 aa13.88□□□□□ -0.19
HDAC6-229ENST00000486665 FRMD5Q7Z6J6 570 aa13.88□□□□□ -0.19
HDAC6-229ENST00000486665 CREBRFQ8IUR6 639 aa13.88□□□□□ -0.19
HDAC6-229ENST00000486665 BRSK2Q8IWQ3 736 aa13.88□□□□□ -0.19
HDAC6-229ENST00000486665 CRIPAKQ8N1N5 446 aa13.88□□□□□ -0.19
HDAC6-229ENST00000486665 GDPD5Q8WTR4 605 aa13.88□□□□□ -0.19
HDAC6-229ENST00000486665 CNOT6LQ96LI5 555 aaKnown RBP13.88□□□□□ -0.19
HDAC6-229ENST00000486665 MKNK1Q9BUB5 465 aa13.88□□□□□ -0.19
HDAC6-229ENST00000486665 CCDC94Q9BW85 323 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-229ENST00000486665 RPF1Q9H9Y2 349 aaKnown RBP13.88□□□□□ -0.19
HDAC6-229ENST00000486665 RBAKQ9NYW8 714 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-229ENST00000486665 KCNJ18B7U540 433 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 MAPK13O15264 365 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 TLL1O43897 1013 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 GNA14O95837 355 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 EOMESO95936 686 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 AFF1P51825 1210 aaKnown RBP13.87□□□□□ -0.19
HDAC6-229ENST00000486665 MCCD1P59942 119 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-229ENST00000486665 DLG4P78352 724 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 SPAG1Q07617 926 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 KCNJ12Q14500 433 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 PSMD6Q15008 389 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 CCDC40Q4G0X9 1142 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 TCP11X2Q5H9J9 407 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 KHSRPQ92945 711 aaKnown RBP eCLIP13.87□□□□□ -0.19
HDAC6-229ENST00000486665 CCDC127Q96BQ5 260 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 PGBD4Q96DM1 585 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 FAM212AQ96EL1 285 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 FAM84AQ96KN4 292 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 POP1Q99575 1024 aaKnown RBP13.87□□□□□ -0.19
HDAC6-229ENST00000486665 EPHX3Q9H6B9 360 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 PDE11AQ9HCR9 933 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 MIOSQ9NXC5 875 aa13.87□□□□□ -0.19
HDAC6-229ENST00000486665 ARMCX3Q9UH62 379 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-229ENST00000486665 TTC26A0AVF1 554 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 GOLGA6L19H0YKK7 550 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 OFD1O75665 1012 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 BAIAP3O94812 1187 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 TRIM49P0CI25 452 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 TRIM49CP0CI26 452 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 FGFR1P11362 822 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 CDK11BP21127 795 aaKnown RBP13.86□□□□□ -0.19
HDAC6-229ENST00000486665 MARSP56192 900 aaKnown RBP13.86□□□□□ -0.19
HDAC6-229ENST00000486665 POU5F1Q01860 360 aaKnown RBP13.86□□□□□ -0.19
HDAC6-229ENST00000486665 XKR4Q5GH76 650 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 TRIM59Q8IWR1 403 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 TMEM130Q8N3G9 435 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 GSTCDQ8NEC7 633 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 PARD3BQ8TEW8 1205 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 ZNF516Q92618 1163 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 SNX27Q96L92 541 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 ZMAT2Q96NC0 199 aaKnown RBP13.86□□□□□ -0.19
HDAC6-229ENST00000486665 GAD1Q99259 594 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 ELAC1Q9H777 363 aaKnown RBP13.86□□□□□ -0.19
HDAC6-229ENST00000486665 METTL14Q9HCE5 456 aaKnown RBP13.86□□□□□ -0.19
HDAC6-229ENST00000486665 TOPORSQ9NS56 1045 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-229ENST00000486665 TMEM161AQ9NX61 479 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 MAGEC2Q9UBF1 373 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-229ENST00000486665 LIMA1Q9UHB6 759 aaKnown RBP13.86□□□□□ -0.19
HDAC6-229ENST00000486665 MTUS1Q9ULD2 1270 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 GIT1Q9Y2X7 761 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 PCDHB7Q9Y5E2 793 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 PTPRJQ12913 1337 aa13.86□□□□□ -0.19
HDAC6-229ENST00000486665 MICAL3Q7RTP6 2002 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 LRRIQ3A6PVS8 624 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-229ENST00000486665 UPP2O95045 317 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 KRT13P13646 458 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 EEF1GP26641 437 aaKnown RBP13.85□□□□□ -0.19
HDAC6-229ENST00000486665 MTIF2P46199 727 aaKnown RBP13.85□□□□□ -0.19
HDAC6-229ENST00000486665 KCNJ6P48051 423 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 GATMP50440 423 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 VAMP7P51809 220 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 YARSP54577 528 aaKnown RBP13.85□□□□□ -0.19
HDAC6-229ENST00000486665 BFSP1Q12934 665 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 KRT31Q15323 416 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 CLLU1OSQ5K130 101 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 LMBRD2Q68DH5 695 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-229ENST00000486665 SCARA3Q6AZY7 606 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 INTS8Q75QN2 995 aaKnown RBP13.85□□□□□ -0.19
HDAC6-229ENST00000486665 APTXQ7Z2E3 356 aaKnown RBP13.85□□□□□ -0.19
HDAC6-229ENST00000486665 NPAS4Q8IUM7 802 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 FAM114A1Q8IWE2 563 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 EFCAB13Q8IY85 973 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 HACE1Q8IYU2 909 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 HELQQ8TDG4 1101 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 TMC2Q8TDI7 906 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 TOP1MTQ969P6 601 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 ZFP42Q96MM3 310 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 RSAD1Q9HA92 442 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 PLEKHA5Q9HAU0 1116 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 TAB2Q9NYJ8 693 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 LRFN2Q9ULH4 789 aa13.85□□□□□ -0.19
HDAC6-229ENST00000486665 SMIM28A0A1B0GU29 152 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 ARL5CA6NH57 179 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 LRRC10BA6NIK2 292 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms