RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 APEX2Q9UBZ4 518 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 ZNF212Q9UDV6 495 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 C10orf71Q711Q0 1435 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 FSCN2O14926 492 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 PENKP01210 267 aaPredicted RBP11.32□□□□□ -0.6
CCDC171-208ENST00000486641 FAM163BP0C2L3 166 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 PSMC2P35998 433 aaKnown RBP11.32□□□□□ -0.6
CCDC171-208ENST00000486641 CLK2P49760 499 aaKnown RBP11.32□□□□□ -0.6
CCDC171-208ENST00000486641 LSAMPQ13449 338 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 PTK6Q13882 451 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 PKN2Q16513 984 aaKnown RBP11.32□□□□□ -0.6
CCDC171-208ENST00000486641 BMT2Q1RMZ1 405 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 C3orf67Q6ZVT6 689 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 RFWD2Q8NHY2 731 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 ZNF75CPQ92670 426 aaPredicted RBP11.32□□□□□ -0.6
CCDC171-208ENST00000486641 STMN2Q93045 179 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 PLEKHG4BQ96PX9 1271 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 RUSC1Q9BVN2 902 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 TRAIPQ9BWF2 469 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 ASCC2Q9H1I8 757 aaPredicted RBP11.32□□□□□ -0.6
CCDC171-208ENST00000486641 KIAA1586Q9HCI6 787 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 PRDM11Q9NQV5 511 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 GALNT8Q9NY28 637 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 DCTN4Q9UJW0 460 aa11.32□□□□□ -0.6
CCDC171-208ENST00000486641 SFI1A8K8P3 1242 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 hCG_1984214I3L0E3 225 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 ZWINTO95229 277 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 TRIM49P0CI25 452 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 TRIM49CP0CI26 452 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 ATF2P15336 505 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 CAV1Q03135 178 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 THOC5Q13769 683 aaKnown RBP11.31□□□□□ -0.6
CCDC171-208ENST00000486641 LIN52Q52LA3 116 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 CYP4F22Q6NT55 531 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 RFX8Q6ZV50 586 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 DZIP1Q86YF9 867 aaKnown RBP11.31□□□□□ -0.6
CCDC171-208ENST00000486641 SCYL3Q8IZE3 742 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 ZNF713Q8N859 430 aaPredicted RBP11.31□□□□□ -0.6
CCDC171-208ENST00000486641 SYT2Q8N9I0 419 aaPredicted RBP11.31□□□□□ -0.6
CCDC171-208ENST00000486641 MORC4Q8TE76 937 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 CEP95Q96GE4 821 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 NSL1Q96IY1 281 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 HAPLN3Q96S86 360 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 PCDHB18PQ96TA0 734 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 SUGT1Q9Y2Z0 365 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.31□□□□□ -0.6
CCDC171-208ENST00000486641 ZMYM2Q9UBW7 1377 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 SORBS3O60504 671 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 CA4P22748 312 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 RRM1P23921 792 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 HIBADHP31937 336 aaKnown RBP11.31□□□□□ -0.6
CCDC171-208ENST00000486641 CDK8P49336 464 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 INHBCP55103 352 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 COG2Q14746 738 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 MAPK6Q16659 721 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 DPY19L2Q6NUT2 758 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 LCA5Q86VQ0 697 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 MAPKAPK5Q8IW41 473 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 VPS52Q8N1B4 723 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 NEDD1Q8NHV4 660 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 PSPC1Q8WXF1 523 aaKnown RBP11.31□□□□□ -0.6
CCDC171-208ENST00000486641 MCUR1Q96AQ8 359 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 PRR11Q96HE9 360 aaPredicted RBP11.31□□□□□ -0.6
CCDC171-208ENST00000486641 ADAM33Q9BZ11 813 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 TAS2R1Q9NYW7 299 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 LARSQ9P2J5 1176 aaKnown RBP11.31□□□□□ -0.6
CCDC171-208ENST00000486641 HEY2Q9UBP5 337 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 ARFGEF1Q9Y6D6 1849 aa11.31□□□□□ -0.6
CCDC171-208ENST00000486641 UMODL1Q5DID0 1318 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 MYO3BQ8WXR4 1341 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 EXOC1LA0A1B0GW35 172 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 GSTTP1A0A1W2PQM5 241 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 POC1B-GALNT4F8VUJ3 575 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 PPP1R11O60927 126 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-208ENST00000486641 MTA2O94776 668 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 AMPD1P23109 780 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 POLD1P28340 1107 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 CCNFP41002 786 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 SLC18A1P54219 525 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 OVGP1Q12889 678 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 PARP10Q53GL7 1025 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 RIBC1Q8N443 379 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-208ENST00000486641 SMC6Q96SB8 1091 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 HERPUD2Q9BSE4 406 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 NUP85Q9BW27 656 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 TMCO1Q9UM00 188 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 DNM3Q9UQ16 869 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 BCS1LQ9Y276 419 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 COMMD3-BMI1R4GMX3 469 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 WNK3Q9BYP7 1800 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 A0A1W2PPM1 405 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 HAUS5O94927 633 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 KRT15P19012 456 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 MAGEA4P43358 317 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 MAGEA8P43361 318 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 CDK7P50613 346 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 NR1H3Q13133 447 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 PPP2R5CQ13362 524 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 DAB2IPQ5VWQ8 1189 aa11.3□□□□□ -0.6
CCDC171-208ENST00000486641 FYB2Q5VWT5 728 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms