RNA–Protein interactions for RNA: ENST00000486585.1

PCMT1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, human

TSL 3

Gene PCMT1, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCMT1-208	ENST00000486585	PDZD7	Q9H5P4	517 aa		10.85	□□□□□ -0.67
PCMT1-208	ENST00000486585	AVEN	Q9NQS1	362 aa	Predicted RBP	10.85	□□□□□ -0.67
PCMT1-208	ENST00000486585	SNTG2	Q9NY99	539 aa		10.85	□□□□□ -0.67
PCMT1-208	ENST00000486585	MTRR	Q9UBK8	725 aa		10.85	□□□□□ -0.67
PCMT1-208	ENST00000486585	BACE2	Q9Y5Z0	518 aa		10.85	□□□□□ -0.67
PCMT1-208	ENST00000486585	CIT	O14578	2027 aa		10.85	□□□□□ -0.67
PCMT1-208	ENST00000486585	ACACB	O00763	2458 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	POTEM	A6NI47	508 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	PTGES	O14684	152 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	ZNF197	O14709	1029 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	LRG1	P02750	347 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	PRKCB	P05771	671 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	PTPN2	P17706	415 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	NAMPT	P43490	491 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	ADCY1	Q08828	1119 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	NR5A1	Q13285	461 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	TPRG1	Q6ZUI0	275 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	MAEA	Q7L5Y9	396 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	DCLK2	Q8N568	766 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	ZBTB44	Q8NCP5	570 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	ZNF461	Q8TAF7	563 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	DNASE1L2	Q92874	299 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	DDX27	Q96GQ7	796 aa	Known RBP	10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	IFT74	Q96LB3	600 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	KXD1	Q9BQD3	176 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	EPC1	Q9H2F5	836 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	DNMT3B	Q9UBC3	853 aa	Known RBP	10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	GMEB2	Q9UKD1	530 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	CDV3	Q9UKY7	258 aa	Known RBP	10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	RAB23	Q9ULC3	237 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	EPG5	Q9HCE0	2579 aa		10.84	□□□□□ -0.67
PCMT1-208	ENST00000486585	ARHGEF35	A5YM69	484 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	PRRG1	O14668	218 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	ADAM12	O43184	909 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	LRRN2	O75325	713 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	MICAL2	O94851	1124 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	RHO	P08100	348 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	MUT	P22033	750 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	YARS	P54577	528 aa	Known RBP	10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	NAB2	Q15742	525 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	EARS2	Q5JPH6	523 aa	Known RBP	10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	MAMSTR	Q6ZN01	415 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	NOSTRIN	Q8IVI9	506 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	ELMOD1	Q8N336	334 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	NELL1	Q92832	810 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	TNFRSF25	Q93038	417 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	ELSPBP1	Q96BH3	223 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	MTMR9	Q96QG7	549 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	POLR3C	Q9BUI4	534 aa	Predicted RBP	10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	GPRC5C	Q9NQ84	441 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	GJB4	Q9NTQ9	266 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	SLC38A7	Q9NVC3	462 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	HCFC1R1	Q9NWW0	138 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	CACNG4	Q9UBN1	327 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	MAFF	Q9ULX9	164 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	SMG5	Q9UPR3	1016 aa	Known RBP	10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	GDA	Q9Y2T3	454 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	MTF2	Q9Y483	593 aa	Predicted RBP	10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	CDY1	Q9Y6F8	540 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	PHLPP2	Q6ZVD8	1323 aa		10.83	□□□□□ -0.68
PCMT1-208	ENST00000486585	ARHGEF37	A1IGU5	675 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	FAM205C	A6NFA0	338 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585		H7C4K7	107 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	LILRB5	O75023	590 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	SPATA31C1	P0DKV0	1188 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	CYP11B2	P19099	503 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	RPA1	P27694	616 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	ORC2	Q13416	577 aa	Predicted RBP	10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	SAFB	Q15424	915 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	CYP4A22	Q5TCH4	519 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	ATF7IP2	Q5U623	682 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	SLC8B1	Q6J4K2	584 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	PADI6	Q6TGC4	694 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	CATSPER3	Q86XQ3	398 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	LEMD2	Q8NC56	503 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	ING5	Q8WYH8	240 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	KIFAP3	Q92845	792 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	IRF7	Q92985	503 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	MCRS1	Q96EZ8	462 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	PPP1R10	Q96QC0	940 aa	Known RBP	10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	RTKN	Q9BST9	563 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	TRMT61B	Q9BVS5	477 aa	Known RBP	10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	CCDC94	Q9BW85	323 aa	Predicted RBP	10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	CCDC113	Q9H0I3	377 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	BRD9	Q9H8M2	597 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	ZFP14	Q9HCL3	533 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	PRMT8	Q9NR22	394 aa	Predicted RBP	10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	TPCN1	Q9ULQ1	816 aa		10.82	□□□□□ -0.68
PCMT1-208	ENST00000486585	BTBD18	B2RXH4	712 aa		10.81	□□□□□ -0.68
PCMT1-208	ENST00000486585		K7ERI5	159 aa		10.81	□□□□□ -0.68
PCMT1-208	ENST00000486585	SYN3	O14994	580 aa		10.81	□□□□□ -0.68
PCMT1-208	ENST00000486585	FOXD2	O60548	495 aa	Predicted RBP	10.81	□□□□□ -0.68
PCMT1-208	ENST00000486585	CTDNEP1	O95476	244 aa		10.81	□□□□□ -0.68
PCMT1-208	ENST00000486585	ATF2	P15336	505 aa		10.81	□□□□□ -0.68
PCMT1-208	ENST00000486585	LIG1	P18858	919 aa		10.81	□□□□□ -0.68
PCMT1-208	ENST00000486585	CD72	P21854	359 aa		10.81	□□□□□ -0.68
PCMT1-208	ENST00000486585	TARS	P26639	723 aa	Known RBP	10.81	□□□□□ -0.68
PCMT1-208	ENST00000486585	CLCNKB	P51801	687 aa		10.81	□□□□□ -0.68

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