RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 DRC7Q8IY82 874 aa7.02□□□□□ -1.29
LTN1-206ENST00000486427 NEU4Q8WWR8 484 aaPredicted RBP7.02□□□□□ -1.29
LTN1-206ENST00000486427 HAS1Q92839 578 aa7.02□□□□□ -1.29
LTN1-206ENST00000486427 KAT5Q92993 513 aa7.02□□□□□ -1.29
LTN1-206ENST00000486427 LENG9Q96B70 501 aa7.02□□□□□ -1.29
LTN1-206ENST00000486427 MLST8Q9BVC4 326 aa7.02□□□□□ -1.29
LTN1-206ENST00000486427 AKIP1Q9NQ31 210 aa7.02□□□□□ -1.29
LTN1-206ENST00000486427 FZD1Q9UP38 647 aa7.02□□□□□ -1.29
LTN1-206ENST00000486427 PRSS23O95084 383 aa7.01□□□□□ -1.29
LTN1-206ENST00000486427 POMCP01189 267 aa7.01□□□□□ -1.29
LTN1-206ENST00000486427 ADKP55263 362 aaKnown RBP7.01□□□□□ -1.29
LTN1-206ENST00000486427 ANAPC15P60006 121 aa7.01□□□□□ -1.29
LTN1-206ENST00000486427 EXOSC10Q01780 885 aaKnown RBP7.01□□□□□ -1.29
LTN1-206ENST00000486427 AGAP9Q5VTM2 703 aa7.01□□□□□ -1.29
LTN1-206ENST00000486427 ZNF627Q7L945 461 aa7.01□□□□□ -1.29
LTN1-206ENST00000486427 PLXDC1Q8IUK5 500 aa7.01□□□□□ -1.29
LTN1-206ENST00000486427 TMX3Q96JJ7 454 aa7.01□□□□□ -1.29
LTN1-206ENST00000486427 TDP1Q9NUW8 608 aa7.01□□□□□ -1.29
LTN1-206ENST00000486427 TCRBV7S2A1N4TA0A589 114 aa7□□□□□ -1.29
LTN1-206ENST00000486427 DIRC3C9JPN6 131 aa7□□□□□ -1.29
LTN1-206ENST00000486427 TEX33O43247 280 aa7□□□□□ -1.29
LTN1-206ENST00000486427 LPXNO60711 386 aa7□□□□□ -1.29
LTN1-206ENST00000486427 ITGB1P05556 798 aa7□□□□□ -1.29
LTN1-206ENST00000486427 ADH4P08319 380 aa7□□□□□ -1.29
LTN1-206ENST00000486427 PTGS2P35354 604 aa7□□□□□ -1.29
LTN1-206ENST00000486427 CDC42EP1Q00587 391 aa7□□□□□ -1.29
LTN1-206ENST00000486427 UAP1L1Q3KQV9 507 aa7□□□□□ -1.29
LTN1-206ENST00000486427 Q6ZPA2 131 aa7□□□□□ -1.29
LTN1-206ENST00000486427 LRRC55Q6ZSA7 311 aa7□□□□□ -1.29
LTN1-206ENST00000486427 IFI44Q8TCB0 444 aa7□□□□□ -1.29
LTN1-206ENST00000486427 SORCS2Q96PQ0 1159 aa7□□□□□ -1.29
LTN1-206ENST00000486427 FAM30AQ9NZY2 134 aa7□□□□□ -1.29
LTN1-206ENST00000486427 PCDHB1Q9Y5F3 818 aa7□□□□□ -1.29
LTN1-206ENST00000486427 HS3ST4Q9Y661 456 aa7□□□□□ -1.29
LTN1-206ENST00000486427 SHROOM4Q9ULL8 1493 aa6.99□□□□□ -1.29
LTN1-206ENST00000486427 CCDC78A2IDD5 438 aa6.99□□□□□ -1.29
LTN1-206ENST00000486427 RNASET2O00584 256 aaKnown RBP6.99□□□□□ -1.29
LTN1-206ENST00000486427 NDUFA10O95299 355 aa6.99□□□□□ -1.29
LTN1-206ENST00000486427 LAG3P18627 525 aa6.99□□□□□ -1.29
LTN1-206ENST00000486427 RECQLP46063 649 aaPredicted RBP6.99□□□□□ -1.29
LTN1-206ENST00000486427 CTXN1P60606 82 aa6.99□□□□□ -1.29
LTN1-206ENST00000486427 FHL2Q14192 279 aa6.99□□□□□ -1.29
LTN1-206ENST00000486427 BEAN1Q3B7T3 259 aa6.99□□□□□ -1.29
LTN1-206ENST00000486427 RSPH3Q86UC2 560 aa6.99□□□□□ -1.29
LTN1-206ENST00000486427 RHOT2Q8IXI1 618 aa6.99□□□□□ -1.29
LTN1-206ENST00000486427 CMTR2Q8IYT2 770 aaKnown RBP6.99□□□□□ -1.29
LTN1-206ENST00000486427 SYNE4Q8N205 404 aa6.99□□□□□ -1.29
LTN1-206ENST00000486427 OR56A1Q8NGH5 318 aa6.99□□□□□ -1.29
LTN1-206ENST00000486427 CHMP4CQ96CF2 233 aa6.99□□□□□ -1.29
LTN1-206ENST00000486427 MRGPRX4Q96LA9 322 aa6.99□□□□□ -1.29
LTN1-206ENST00000486427 DMRTA2Q96SC8 542 aa6.99□□□□□ -1.29
LTN1-206ENST00000486427 KLHL11Q9NVR0 708 aa6.99□□□□□ -1.29
LTN1-206ENST00000486427 DDX56Q9NY93 547 aaKnown RBP6.99□□□□□ -1.29
LTN1-206ENST00000486427 DKK2Q9UBU2 259 aa6.99□□□□□ -1.29
LTN1-206ENST00000486427 MAP3K2Q9Y2U5 619 aa6.99□□□□□ -1.29
LTN1-206ENST00000486427 CENPVL1A0A0U1RR11 272 aa6.98□□□□□ -1.29
LTN1-206ENST00000486427 KIAA0391O15091 583 aaKnown RBP6.98□□□□□ -1.29
LTN1-206ENST00000486427 SGTAO43765 313 aa6.98□□□□□ -1.29
LTN1-206ENST00000486427 SNUPNO95149 360 aaKnown RBP6.98□□□□□ -1.29
LTN1-206ENST00000486427 ELANEP08246 267 aa6.98□□□□□ -1.29
LTN1-206ENST00000486427 SBK3P0C264 359 aa6.98□□□□□ -1.29
LTN1-206ENST00000486427 SLC6A4P31645 630 aa6.98□□□□□ -1.29
LTN1-206ENST00000486427 NEK2P51955 445 aa6.98□□□□□ -1.29
LTN1-206ENST00000486427 ZNF280AP59817 542 aaPredicted RBP6.98□□□□□ -1.29
LTN1-206ENST00000486427 IGBP1P78318 339 aa6.98□□□□□ -1.29
LTN1-206ENST00000486427 TIGD2Q4W5G0 525 aa6.98□□□□□ -1.29
LTN1-206ENST00000486427 TSHZ3Q63HK5 1081 aa6.98□□□□□ -1.29
LTN1-206ENST00000486427 ZBTB46Q86UZ6 589 aa6.98□□□□□ -1.29
LTN1-206ENST00000486427 MYEOVQ96EZ4 313 aa6.98□□□□□ -1.29
LTN1-206ENST00000486427 ZSWIM1Q9BR11 485 aa6.98□□□□□ -1.29
LTN1-206ENST00000486427 C11orf54Q9H0W9 315 aaPredicted RBP6.98□□□□□ -1.29
LTN1-206ENST00000486427 GSTO2Q9H4Y5 243 aa6.98□□□□□ -1.29
LTN1-206ENST00000486427 TYW1Q9NV66 732 aaKnown RBP6.98□□□□□ -1.29
LTN1-206ENST00000486427 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.98□□□□□ -1.29
LTN1-206ENST00000486427 GAGE12BA1L429 117 aa6.97□□□□□ -1.29
LTN1-206ENST00000486427 GAGE12HA6NDE8 117 aa6.97□□□□□ -1.29
LTN1-206ENST00000486427 TMEM200CA6NKL6 621 aa6.97□□□□□ -1.29
LTN1-206ENST00000486427 MARCH11A6NNE9 402 aa6.97□□□□□ -1.29
LTN1-206ENST00000486427 ABHD16AO95870 558 aa6.97□□□□□ -1.29
LTN1-206ENST00000486427 PDGFRBP09619 1106 aa6.97□□□□□ -1.29
LTN1-206ENST00000486427 KRT4P19013 534 aa6.97□□□□□ -1.29
LTN1-206ENST00000486427 DSC2Q02487 901 aa6.97□□□□□ -1.29
LTN1-206ENST00000486427 TMEM240Q5SV17 173 aa6.97□□□□□ -1.29
LTN1-206ENST00000486427 DACT2Q5SW24 774 aa6.97□□□□□ -1.29
LTN1-206ENST00000486427 CPA6Q8N4T0 437 aa6.97□□□□□ -1.29
LTN1-206ENST00000486427 PROKR1Q8TCW9 393 aa6.97□□□□□ -1.29
LTN1-206ENST00000486427 CLPTM1LQ96KA5 538 aa6.97□□□□□ -1.29
LTN1-206ENST00000486427 ADAM2Q99965 735 aa6.97□□□□□ -1.29
LTN1-206ENST00000486427 LUC7L2Q9Y383 392 aaKnown RBP6.97□□□□□ -1.29
LTN1-206ENST00000486427 SPATA31D3P0C874 917 aa6.96□□□□□ -1.3
LTN1-206ENST00000486427 GCSHP23434 173 aa6.96□□□□□ -1.3
LTN1-206ENST00000486427 CREMQ03060 361 aa6.96□□□□□ -1.3
LTN1-206ENST00000486427 TLE1Q04724 770 aa6.96□□□□□ -1.3
LTN1-206ENST00000486427 KCNV1Q6PIU1 500 aa6.96□□□□□ -1.3
LTN1-206ENST00000486427 SPATA31D4Q6ZUB0 917 aa6.96□□□□□ -1.3
LTN1-206ENST00000486427 LDLRAD3Q86YD5 345 aa6.96□□□□□ -1.3
LTN1-206ENST00000486427 VRK3Q8IV63 474 aa6.96□□□□□ -1.3
LTN1-206ENST00000486427 MIER2Q8N344 545 aa6.96□□□□□ -1.3
LTN1-206ENST00000486427 AMER2Q8N7J2 671 aa6.96□□□□□ -1.3
LTN1-206ENST00000486427 CPEB3Q8NE35 698 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms