RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 HTR4Q13639 388 aa19.36■□□□□ 0.69
MCF2L-226ENST00000486210 MXD4Q14582 209 aaPredicted RBP19.36■□□□□ 0.69
MCF2L-226ENST00000486210 PCBP1Q15365 356 aaKnown RBP eCLIP19.36■□□□□ 0.69
MCF2L-226ENST00000486210 CCDC73Q6ZRK6 1079 aa19.36■□□□□ 0.69
MCF2L-226ENST00000486210 PALB2Q86YC2 1186 aa19.36■□□□□ 0.69
MCF2L-226ENST00000486210 MAML2Q8IZL2 1156 aaPredicted RBP19.36■□□□□ 0.69
MCF2L-226ENST00000486210 DCLK2Q8N568 766 aa19.36■□□□□ 0.69
MCF2L-226ENST00000486210 HDAC7Q8WUI4 952 aa19.36■□□□□ 0.69
MCF2L-226ENST00000486210 B3GALT6Q96L58 329 aa19.36■□□□□ 0.69
MCF2L-226ENST00000486210 UBN1Q9NPG3 1134 aa19.36■□□□□ 0.69
MCF2L-226ENST00000486210 LMBRD1Q9NUN5 540 aa19.36■□□□□ 0.69
MCF2L-226ENST00000486210 DPP7Q9UHL4 492 aa19.36■□□□□ 0.69
MCF2L-226ENST00000486210 SIT1Q9Y3P8 196 aa19.36■□□□□ 0.69
MCF2L-226ENST00000486210 HES2Q9Y543 173 aa19.36■□□□□ 0.69
MCF2L-226ENST00000486210 ARHGEF35A5YM69 484 aa19.35■□□□□ 0.69
MCF2L-226ENST00000486210 ARL5CA6NH57 179 aa19.35■□□□□ 0.69
MCF2L-226ENST00000486210 LRRN2O75325 713 aa19.35■□□□□ 0.69
MCF2L-226ENST00000486210 ITGA4P13612 1032 aa19.35■□□□□ 0.69
MCF2L-226ENST00000486210 LIG1P18858 919 aa19.35■□□□□ 0.69
MCF2L-226ENST00000486210 STAT6P42226 847 aa19.35■□□□□ 0.69
MCF2L-226ENST00000486210 SCNN1GP51170 649 aa19.35■□□□□ 0.69
MCF2L-226ENST00000486210 DHX8Q14562 1220 aaKnown RBP19.35■□□□□ 0.69
MCF2L-226ENST00000486210 LILRA6Q6PI73 481 aa19.35■□□□□ 0.69
MCF2L-226ENST00000486210 PADI6Q6TGC4 694 aa19.35■□□□□ 0.69
MCF2L-226ENST00000486210 GET4Q7L5D6 327 aaPredicted RBP19.35■□□□□ 0.69
MCF2L-226ENST00000486210 C1orf210Q8IVY1 113 aa19.35■□□□□ 0.69
MCF2L-226ENST00000486210 HACE1Q8IYU2 909 aa19.35■□□□□ 0.69
MCF2L-226ENST00000486210 SYT2Q8N9I0 419 aaPredicted RBP19.35■□□□□ 0.69
MCF2L-226ENST00000486210 CCDC51Q96ER9 411 aa19.35■□□□□ 0.69
MCF2L-226ENST00000486210 GAD1Q99259 594 aa19.35■□□□□ 0.69
MCF2L-226ENST00000486210 RPP25Q9BUL9 199 aaKnown RBP19.35■□□□□ 0.69
MCF2L-226ENST00000486210 FOXQ1Q9C009 403 aa19.35■□□□□ 0.69
MCF2L-226ENST00000486210 XPNPEP1Q9NQW7 623 aa19.35■□□□□ 0.69
MCF2L-226ENST00000486210 SLC2A4RGQ9NR83 387 aa19.35■□□□□ 0.69
MCF2L-226ENST00000486210 NUMBLQ9Y6R0 609 aa19.35■□□□□ 0.69
MCF2L-226ENST00000486210 WDR87Q6ZQQ6 2873 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 USO1O60763 962 aaKnown RBP19.34■□□□□ 0.69
MCF2L-226ENST00000486210 AXLP30530 894 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 PUM1Q14671 1186 aaKnown RBP eCLIP19.34■□□□□ 0.69
MCF2L-226ENST00000486210 NOTUMQ6P988 496 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 DCLRE1AQ6PJP8 1040 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 GLYCTKQ8IVS8 523 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 KCTD17Q8N5Z5 321 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 SUMF1Q8NBK3 374 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 PJA1Q8NG27 643 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 LARP4BQ92615 738 aaKnown RBP19.34■□□□□ 0.69
MCF2L-226ENST00000486210 ZFP42Q96MM3 310 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 RUSC1Q9BVN2 902 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 GPR62Q9BZJ7 368 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 PRKD2Q9BZL6 878 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 PLEKHA4Q9H4M7 779 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 PIDD1Q9HB75 910 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 POLD4Q9HCU8 107 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 DLL3Q9NYJ7 618 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.34■□□□□ 0.692e-6■■■□□ 17.6
MCF2L-226ENST00000486210 STK17AQ9UEE5 414 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 SERTAD1Q9UHV2 236 aa19.34■□□□□ 0.69
MCF2L-226ENST00000486210 INO80B-WBP1J3KQ70 363 aa19.33■□□□□ 0.68
MCF2L-226ENST00000486210 TSPAN1O60635 241 aa19.33■□□□□ 0.68
MCF2L-226ENST00000486210 DGAT1O75907 488 aa19.33■□□□□ 0.68
MCF2L-226ENST00000486210 SYKP43405 635 aa19.33■□□□□ 0.68
MCF2L-226ENST00000486210 STARD6P59095 220 aa19.33■□□□□ 0.68
MCF2L-226ENST00000486210 UBE2HP62256 183 aa19.33■□□□□ 0.68
MCF2L-226ENST00000486210 ARSHQ5FYA8 562 aa19.33■□□□□ 0.68
MCF2L-226ENST00000486210 RINT1Q6NUQ1 792 aa19.33■□□□□ 0.68
MCF2L-226ENST00000486210 ELMSAN1Q6PJG2 1045 aa19.33■□□□□ 0.68
MCF2L-226ENST00000486210 ZC3H14Q6PJT7 736 aaKnown RBP19.33■□□□□ 0.68
MCF2L-226ENST00000486210 FMR1NBQ8N0W7 255 aaPredicted RBP19.33■□□□□ 0.68
MCF2L-226ENST00000486210 IQUBQ8NA54 791 aa19.33■□□□□ 0.68
MCF2L-226ENST00000486210 GSTCDQ8NEC7 633 aa19.33■□□□□ 0.68
MCF2L-226ENST00000486210 ENGASEQ8NFI3 743 aa19.33■□□□□ 0.68
MCF2L-226ENST00000486210 RUBCNQ92622 972 aa19.33■□□□□ 0.68
MCF2L-226ENST00000486210 CPB2Q96IY4 423 aa19.33■□□□□ 0.68
MCF2L-226ENST00000486210 TRIM6Q9C030 488 aaPredicted RBP19.33■□□□□ 0.68
MCF2L-226ENST00000486210 ZDHHC7Q9NXF8 308 aa19.33■□□□□ 0.68
MCF2L-226ENST00000486210 FRYLO94915 3013 aa19.32■□□□□ 0.68
MCF2L-226ENST00000486210 NPHP3-ACAD11A0A0J9YXS1 232 aa19.32■□□□□ 0.68
MCF2L-226ENST00000486210 ACTN4O43707 911 aaKnown RBP19.32■□□□□ 0.68
MCF2L-226ENST00000486210 NR1I2O75469 434 aa19.32■□□□□ 0.68
MCF2L-226ENST00000486210 C1RP00736 705 aa19.32■□□□□ 0.68
MCF2L-226ENST00000486210 RPL17P18621 184 aaKnown RBP19.32■□□□□ 0.68
MCF2L-226ENST00000486210 CYP11B2P19099 503 aa19.32■□□□□ 0.68
MCF2L-226ENST00000486210 PTENP60484 403 aa19.32■□□□□ 0.68
MCF2L-226ENST00000486210 SNW1Q13573 536 aaKnown RBP19.32■□□□□ 0.68
MCF2L-226ENST00000486210 FUT10Q6P4F1 479 aa19.32■□□□□ 0.68
MCF2L-226ENST00000486210 C1orf186Q6ZWK4 172 aa19.32■□□□□ 0.68
MCF2L-226ENST00000486210 MAEAQ7L5Y9 396 aa19.32■□□□□ 0.68
MCF2L-226ENST00000486210 FGF14Q92915 247 aa19.32■□□□□ 0.68
MCF2L-226ENST00000486210 HINFPQ9BQA5 517 aa19.32■□□□□ 0.68
MCF2L-226ENST00000486210 GPRC5CQ9NQ84 441 aa19.32■□□□□ 0.68
MCF2L-226ENST00000486210 FNIP2Q9P278 1114 aa19.32■□□□□ 0.68
MCF2L-226ENST00000486210 CEP250Q9BV73 2442 aa19.31■□□□□ 0.68
MCF2L-226ENST00000486210 ZNF202O95125 648 aa19.31■□□□□ 0.68
MCF2L-226ENST00000486210 GPC5P78333 572 aa19.31■□□□□ 0.68
MCF2L-226ENST00000486210 CACNB1Q02641 598 aaPredicted RBP19.31■□□□□ 0.68
MCF2L-226ENST00000486210 PARM1Q6UWI2 310 aa19.31■□□□□ 0.68
MCF2L-226ENST00000486210 SV2BQ7L1I2 683 aa19.31■□□□□ 0.68
MCF2L-226ENST00000486210 GPBP1Q86WP2 473 aa19.31■□□□□ 0.68
MCF2L-226ENST00000486210 GRAMD1CQ8IYS0 662 aa19.31■□□□□ 0.68
MCF2L-226ENST00000486210 RABGGTAQ92696 567 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms