RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 RFPL2O75678 378 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 ZSCAN22P10073 491 aaPredicted RBP19.28■□□□□ 0.68
COL6A1-204ENST00000486023 CXCL8P10145 99 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 IDEP14735 1019 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 BRCC3P46736 316 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 NASPP49321 788 aaPredicted RBP19.28■□□□□ 0.68
COL6A1-204ENST00000486023 ZNF131P52739 623 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 PSMD5Q16401 504 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 UPP1Q16831 310 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 ELMSAN1Q6PJG2 1045 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 ALKAL1Q6UXT8 129 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 SFR1Q86XK3 245 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 LINC00301Q8NCQ3 95 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 DDX12PQ92771 950 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 STAMQ92783 540 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 UROC1Q96N76 676 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 C11orf16Q9NQ32 467 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 NR2E1Q9Y466 385 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 PODXLO00592 558 aa19.27■□□□□ 0.68
COL6A1-204ENST00000486023 TNFSF9P41273 254 aa19.27■□□□□ 0.68
COL6A1-204ENST00000486023 MCL1Q07820 350 aa19.27■□□□□ 0.68
COL6A1-204ENST00000486023 ELAVL2Q12926 359 aaKnown RBP19.27■□□□□ 0.68
COL6A1-204ENST00000486023 PKP1Q13835 747 aa19.27■□□□□ 0.68
COL6A1-204ENST00000486023 SLC10A6Q3KNW5 377 aa19.27■□□□□ 0.68
COL6A1-204ENST00000486023 GPR149Q86SP6 731 aa19.27■□□□□ 0.68
COL6A1-204ENST00000486023 TMEM130Q8N3G9 435 aa19.27■□□□□ 0.68
COL6A1-204ENST00000486023 C3orf58Q8NDZ4 430 aa19.27■□□□□ 0.68
COL6A1-204ENST00000486023 LNX1Q8TBB1 728 aaPredicted RBP19.27■□□□□ 0.68
COL6A1-204ENST00000486023 MSTO1Q9BUK6 570 aa19.27■□□□□ 0.68
COL6A1-204ENST00000486023 MRPL44Q9H9J2 332 aaKnown RBP19.27■□□□□ 0.68
COL6A1-204ENST00000486023 PIDD1Q9HB75 910 aa19.27■□□□□ 0.68
COL6A1-204ENST00000486023 DPP7Q9UHL4 492 aa19.27■□□□□ 0.68
COL6A1-204ENST00000486023 NUB1Q9Y5A7 615 aa19.27■□□□□ 0.68
COL6A1-204ENST00000486023 TDRD15B5MCY1 1934 aaKnown RBP19.27■□□□□ 0.67
COL6A1-204ENST00000486023 A0A087X0B3 334 aa19.26■□□□□ 0.67
COL6A1-204ENST00000486023 C2CD4DB7Z1M9 353 aa19.26■□□□□ 0.67
COL6A1-204ENST00000486023 MEFVO15553 781 aaPredicted RBP19.26■□□□□ 0.67
COL6A1-204ENST00000486023 TRAPPC3O43617 180 aa19.26■□□□□ 0.67
COL6A1-204ENST00000486023 GPR37L1O60883 481 aa19.26■□□□□ 0.67
COL6A1-204ENST00000486023 BRD1O95696 1058 aa19.26■□□□□ 0.67
COL6A1-204ENST00000486023 F13A1P00488 732 aa19.26■□□□□ 0.67
COL6A1-204ENST00000486023 CREMQ03060 361 aa19.26■□□□□ 0.67
COL6A1-204ENST00000486023 ZBTB41Q5SVQ8 909 aa19.26■□□□□ 0.67
COL6A1-204ENST00000486023 KIF12Q96FN5 646 aa19.26■□□□□ 0.67
COL6A1-204ENST00000486023 DDX27Q96GQ7 796 aaKnown RBP19.26■□□□□ 0.67
COL6A1-204ENST00000486023 CLSTN3Q9BQT9 956 aa19.26■□□□□ 0.67
COL6A1-204ENST00000486023 IKZF4Q9H2S9 585 aa19.26■□□□□ 0.67
COL6A1-204ENST00000486023 CNTN3Q9P232 1028 aa19.26■□□□□ 0.67
COL6A1-204ENST00000486023 FNIP2Q9P278 1114 aa19.26■□□□□ 0.67
COL6A1-204ENST00000486023 TUBGCP4Q9UGJ1 667 aa19.26■□□□□ 0.67
COL6A1-204ENST00000486023 ANKRD63C9JTQ0 380 aa19.25■□□□□ 0.67
COL6A1-204ENST00000486023 ADAM12O43184 909 aa19.25■□□□□ 0.67
COL6A1-204ENST00000486023 CLTAP09496 248 aa19.25■□□□□ 0.67
COL6A1-204ENST00000486023 KCNE1P15382 129 aa19.25■□□□□ 0.67
COL6A1-204ENST00000486023 TKTP29401 623 aaKnown RBP19.25■□□□□ 0.67
COL6A1-204ENST00000486023 XKR4Q5GH76 650 aa19.25■□□□□ 0.67
COL6A1-204ENST00000486023 HERC4Q5GLZ8 1057 aaPredicted RBP19.25■□□□□ 0.67
COL6A1-204ENST00000486023 KREMEN2Q8NCW0 462 aa19.25■□□□□ 0.67
COL6A1-204ENST00000486023 RPF1Q9H9Y2 349 aaKnown RBP19.25■□□□□ 0.67
COL6A1-204ENST00000486023 LIMD1Q9UGP4 676 aa19.25■□□□□ 0.67
COL6A1-204ENST00000486023 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.24■□□□□ 0.67
COL6A1-204ENST00000486023 LACTBL1A8MY62 500 aa19.24■□□□□ 0.67
COL6A1-204ENST00000486023 TISP43B9A030 160 aa19.24■□□□□ 0.67
COL6A1-204ENST00000486023 PPP6R2O75170 966 aa19.24■□□□□ 0.67
COL6A1-204ENST00000486023 OR1D2P34982 312 aa19.24■□□□□ 0.67
COL6A1-204ENST00000486023 ARPP19P56211 112 aa19.24■□□□□ 0.67
COL6A1-204ENST00000486023 GTF2BQ00403 316 aa19.24■□□□□ 0.67
COL6A1-204ENST00000486023 PPP2R3AQ06190 1150 aa19.24■□□□□ 0.67
COL6A1-204ENST00000486023 ADALQ6DHV7 355 aa19.24■□□□□ 0.67
COL6A1-204ENST00000486023 CD300LGQ6UXG3 332 aa19.24■□□□□ 0.67
COL6A1-204ENST00000486023 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.24■□□□□ 0.67
COL6A1-204ENST00000486023 TDRD5Q8NAT2 981 aaKnown RBP19.24■□□□□ 0.67
COL6A1-204ENST00000486023 PIK3R5Q8WYR1 880 aa19.24■□□□□ 0.67
COL6A1-204ENST00000486023 SMG7Q92540 1137 aaKnown RBP19.24■□□□□ 0.67
COL6A1-204ENST00000486023 DHX58Q96C10 678 aa19.24■□□□□ 0.67
COL6A1-204ENST00000486023 FIZ1Q96SL8 496 aa19.24■□□□□ 0.67
COL6A1-204ENST00000486023 OGTO15294 1046 aa19.23■□□□□ 0.67
COL6A1-204ENST00000486023 CUTAO60888 179 aa19.23■□□□□ 0.67
COL6A1-204ENST00000486023 GCNT3O95395 438 aa19.23■□□□□ 0.67
COL6A1-204ENST00000486023 RPL9P32969 192 aaKnown RBP19.23■□□□□ 0.67
COL6A1-204ENST00000486023 ME1P48163 572 aa19.23■□□□□ 0.67
COL6A1-204ENST00000486023 ACOT2P49753 483 aa19.23■□□□□ 0.67
COL6A1-204ENST00000486023 SLC39A4Q6P5W5 647 aa19.23■□□□□ 0.67
COL6A1-204ENST00000486023 PDXDC1Q6P996 788 aa19.23■□□□□ 0.67
COL6A1-204ENST00000486023 CCDC149Q6ZUS6 474 aa19.23■□□□□ 0.67
COL6A1-204ENST00000486023 ZNF720Q7Z2F6 126 aa19.23■□□□□ 0.67
COL6A1-204ENST00000486023 MAP4K3Q8IVH8 894 aa19.23■□□□□ 0.67
COL6A1-204ENST00000486023 NOC3LQ8WTT2 800 aaKnown RBP19.23■□□□□ 0.67
COL6A1-204ENST00000486023 EDAQ92838 391 aa19.23■□□□□ 0.67
COL6A1-204ENST00000486023 DNAJC19Q96DA6 116 aa19.23■□□□□ 0.67
COL6A1-204ENST00000486023 PLEKHA4Q9H4M7 779 aa19.23■□□□□ 0.67
COL6A1-204ENST00000486023 PANK4Q9NVE7 773 aa19.23■□□□□ 0.67
COL6A1-204ENST00000486023 POLIQ9UNA4 740 aa19.23■□□□□ 0.67
COL6A1-204ENST00000486023 CDY1Q9Y6F8 540 aa19.23■□□□□ 0.67
COL6A1-204ENST00000486023 A0A0B4J269 797 aa19.22■□□□□ 0.67
COL6A1-204ENST00000486023 TMEM189-UBE2V1I3L0A0 370 aa19.22■□□□□ 0.67
COL6A1-204ENST00000486023 YEATS4O95619 227 aa19.22■□□□□ 0.67
COL6A1-204ENST00000486023 ASGR2P07307 311 aa19.22■□□□□ 0.67
COL6A1-204ENST00000486023 PDIA4P13667 645 aaKnown RBP19.22■□□□□ 0.67
COL6A1-204ENST00000486023 GAP43P17677 238 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms