RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 CCDC169A6NNP5 214 aa22.33■■□□□ 1.17
CHRD-215ENST00000485883 E9PMD0 336 aa22.33■■□□□ 1.17
CHRD-215ENST00000485883 HOXA9P31269 272 aa22.33■■□□□ 1.17
CHRD-215ENST00000485883 NPTX2P47972 431 aa22.33■■□□□ 1.17
CHRD-215ENST00000485883 TRAPPC10P48553 1259 aa22.33■■□□□ 1.17
CHRD-215ENST00000485883 PEX3P56589 373 aa22.33■■□□□ 1.17
CHRD-215ENST00000485883 OSTNP61366 133 aa22.33■■□□□ 1.17
CHRD-215ENST00000485883 PTGDRQ13258 359 aa22.33■■□□□ 1.17
CHRD-215ENST00000485883 PHLDB3Q6NSJ2 640 aa22.33■■□□□ 1.17
CHRD-215ENST00000485883 PDXDC1Q6P996 788 aa22.33■■□□□ 1.17
CHRD-215ENST00000485883 TAS1R3Q7RTX0 852 aa22.33■■□□□ 1.17
CHRD-215ENST00000485883 DAW1Q8N136 415 aa22.33■■□□□ 1.17
CHRD-215ENST00000485883 DDX27Q96GQ7 796 aaKnown RBP22.33■■□□□ 1.17
CHRD-215ENST00000485883 TBC1D32Q96NH3 1257 aa22.33■■□□□ 1.17
CHRD-215ENST00000485883 ACO2Q99798 780 aaKnown RBP22.33■■□□□ 1.17
CHRD-215ENST00000485883 CDT1Q9H211 546 aa22.33■■□□□ 1.17
CHRD-215ENST00000485883 PTPRHQ9HD43 1115 aa22.33■■□□□ 1.17
CHRD-215ENST00000485883 DLGAP2Q9P1A6 1054 aa22.33■■□□□ 1.17
CHRD-215ENST00000485883 DNMT3BQ9UBC3 853 aaKnown RBP22.33■■□□□ 1.17
CHRD-215ENST00000485883 SIT1Q9Y3P8 196 aa22.33■■□□□ 1.17
CHRD-215ENST00000485883 ZFP37Q9Y6Q3 630 aaPredicted RBP22.33■■□□□ 1.17
CHRD-215ENST00000485883 XYLBO75191 536 aa22.32■■□□□ 1.16
CHRD-215ENST00000485883 LRRN2O75325 713 aa22.32■■□□□ 1.16
CHRD-215ENST00000485883 GLULP15104 373 aa22.32■■□□□ 1.16
CHRD-215ENST00000485883 CDC25AP30304 524 aa22.32■■□□□ 1.16
CHRD-215ENST00000485883 PDIA5Q14554 519 aa22.32■■□□□ 1.16
CHRD-215ENST00000485883 IL17AQ16552 155 aa22.32■■□□□ 1.16
CHRD-215ENST00000485883 IGSF22Q8N9C0 903 aa22.32■■□□□ 1.16
CHRD-215ENST00000485883 ZMAT2Q96NC0 199 aaKnown RBP22.32■■□□□ 1.16
CHRD-215ENST00000485883 RUSC1Q9BVN2 902 aa22.32■■□□□ 1.16
CHRD-215ENST00000485883 NOL7Q9UMY1 257 aaKnown RBP22.32■■□□□ 1.16
CHRD-215ENST00000485883 KIF3AQ9Y496 699 aa22.32■■□□□ 1.16
CHRD-215ENST00000485883 R4GN57 208 aa22.32■■□□□ 1.16
CHRD-215ENST00000485883 COL4A3Q01955 1670 aa22.32■■□□□ 1.16
CHRD-215ENST00000485883 TRIP11Q15643 1979 aa22.32■■□□□ 1.16
CHRD-215ENST00000485883 HIP1RO75146 1068 aa22.31■■□□□ 1.16
CHRD-215ENST00000485883 GRM5P41594 1212 aa22.31■■□□□ 1.16
CHRD-215ENST00000485883 MCM2P49736 904 aa22.31■■□□□ 1.16
CHRD-215ENST00000485883 SNW1Q13573 536 aaKnown RBP22.31■■□□□ 1.16
CHRD-215ENST00000485883 POTEHQ6S545 545 aa22.31■■□□□ 1.16
CHRD-215ENST00000485883 ALKAL1Q6UXT8 129 aa22.31■■□□□ 1.16
CHRD-215ENST00000485883 KCNK18Q7Z418 384 aa22.31■■□□□ 1.16
CHRD-215ENST00000485883 TARS2Q9BW92 718 aaKnown RBP22.31■■□□□ 1.16
CHRD-215ENST00000485883 BACE2Q9Y5Z0 518 aa22.31■■□□□ 1.16
CHRD-215ENST00000485883 NOTCH4Q99466 2003 aa22.31■■□□□ 1.16
CHRD-215ENST00000485883 DCHS1Q96JQ0 3298 aa22.31■■□□□ 1.16
CHRD-215ENST00000485883 U2AF2P26368 475 aaKnown RBP eCLIP22.3■■□□□ 1.162e-18■□□□□ 9.8
CHRD-215ENST00000485883 STARD6P59095 220 aa22.3■■□□□ 1.16
CHRD-215ENST00000485883 MAPK7Q13164 816 aa22.3■■□□□ 1.16
CHRD-215ENST00000485883 UVSSAQ2YD98 709 aa22.3■■□□□ 1.16
CHRD-215ENST00000485883 ZNF568Q3ZCX4 644 aa22.3■■□□□ 1.16
CHRD-215ENST00000485883 XKR4Q5GH76 650 aa22.3■■□□□ 1.16
CHRD-215ENST00000485883 NPAS3Q8IXF0 933 aa22.3■■□□□ 1.16
CHRD-215ENST00000485883 ING5Q8WYH8 240 aa22.3■■□□□ 1.16
CHRD-215ENST00000485883 UROC1Q96N76 676 aa22.3■■□□□ 1.16
CHRD-215ENST00000485883 KXD1Q9BQD3 176 aa22.3■■□□□ 1.16
CHRD-215ENST00000485883 TMEM134Q9H6X4 195 aa22.3■■□□□ 1.16
CHRD-215ENST00000485883 ARHGAP28Q9P2N2 729 aa22.3■■□□□ 1.16
CHRD-215ENST00000485883 DNM3Q9UQ16 869 aa22.3■■□□□ 1.16
CHRD-215ENST00000485883 PHLPP2Q6ZVD8 1323 aa22.3■■□□□ 1.16
CHRD-215ENST00000485883 SFI1A8K8P3 1242 aa22.29■■□□□ 1.16
CHRD-215ENST00000485883 ABLIM1O14639 778 aa22.29■■□□□ 1.16
CHRD-215ENST00000485883 MEFVO15553 781 aaPredicted RBP22.29■■□□□ 1.16
CHRD-215ENST00000485883 POU2F2P09086 479 aa22.29■■□□□ 1.16
CHRD-215ENST00000485883 PABPC1LQ4VXU2 614 aaKnown RBP22.29■■□□□ 1.16
CHRD-215ENST00000485883 RINT1Q6NUQ1 792 aa22.29■■□□□ 1.16
CHRD-215ENST00000485883 ANKS3Q6ZW76 656 aa22.29■■□□□ 1.16
CHRD-215ENST00000485883 PJA1Q8NG27 643 aa22.29■■□□□ 1.16
CHRD-215ENST00000485883 TMX3Q96JJ7 454 aa22.29■■□□□ 1.16
CHRD-215ENST00000485883 MMTAG2Q9BU76 263 aaKnown RBP22.29■■□□□ 1.16
CHRD-215ENST00000485883 CCDC94Q9BW85 323 aaPredicted RBP22.29■■□□□ 1.16
CHRD-215ENST00000485883 MRPL4Q9BYD3 311 aaKnown RBP22.29■■□□□ 1.16
CHRD-215ENST00000485883 KMT5AQ9NQR1 393 aa22.29■■□□□ 1.16
CHRD-215ENST00000485883 MYH15Q9Y2K3 1946 aa22.29■■□□□ 1.16
CHRD-215ENST00000485883 PODXLO00592 558 aa22.28■■□□□ 1.16
CHRD-215ENST00000485883 YARSP54577 528 aaKnown RBP22.28■■□□□ 1.16
CHRD-215ENST00000485883 ROR1Q01973 937 aa22.28■■□□□ 1.16
CHRD-215ENST00000485883 DMP1Q13316 513 aaPredicted RBP22.28■■□□□ 1.16
CHRD-215ENST00000485883 SLC5A9Q2M3M2 681 aa22.28■■□□□ 1.16
CHRD-215ENST00000485883 C1orf186Q6ZWK4 172 aa22.28■■□□□ 1.16
CHRD-215ENST00000485883 MTSS1LQ765P7 747 aa22.28■■□□□ 1.16
CHRD-215ENST00000485883 APBB1IPQ7Z5R6 666 aaPredicted RBP22.28■■□□□ 1.16
CHRD-215ENST00000485883 C18orf25Q96B23 403 aaPredicted RBP22.28■■□□□ 1.16
CHRD-215ENST00000485883 ZBTB45Q96K62 511 aaPredicted RBP22.28■■□□□ 1.16
CHRD-215ENST00000485883 SPTBN4Q9H254 2564 aa22.27■■□□□ 1.16
CHRD-215ENST00000485883 SLC16A4O15374 487 aa22.27■■□□□ 1.16
CHRD-215ENST00000485883 TRAPPC3O43617 180 aa22.27■■□□□ 1.16
CHRD-215ENST00000485883 RHOP08100 348 aa22.27■■□□□ 1.16
CHRD-215ENST00000485883 SP9P0CG40 484 aa22.27■■□□□ 1.16
CHRD-215ENST00000485883 HARSP12081 509 aaKnown RBP22.27■■□□□ 1.16
CHRD-215ENST00000485883 PROZP22891 400 aa22.27■■□□□ 1.16
CHRD-215ENST00000485883 SLC44A4Q53GD3 710 aa22.27■■□□□ 1.16
CHRD-215ENST00000485883 VARS2Q5ST30 1063 aaKnown RBP22.27■■□□□ 1.16
CHRD-215ENST00000485883 KRT79Q5XKE5 535 aa22.27■■□□□ 1.16
CHRD-215ENST00000485883 C1orf210Q8IVY1 113 aa22.27■■□□□ 1.16
CHRD-215ENST00000485883 TMEM130Q8N3G9 435 aa22.27■■□□□ 1.16
CHRD-215ENST00000485883 KCNG4Q8TDN1 519 aa22.27■■□□□ 1.16
CHRD-215ENST00000485883 RAB34Q9BZG1 259 aa22.27■■□□□ 1.16
CHRD-215ENST00000485883 TOPORSQ9NS56 1045 aaPredicted RBP22.27■■□□□ 1.16
CHRD-215ENST00000485883 KCNH3Q9ULD8 1083 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms