RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 DDX3XO00571 662 aaKnown RBP eCLIP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 PDXKO00764 312 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 ABLIM1O14639 778 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 KIAA0391O15091 583 aaKnown RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 BUB1BO60566 1050 aaPredicted RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 PHF2O75151 1096 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 CAND2O75155 1236 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 LUC7L3O95232 432 aaKnown RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 GJB6O95452 261 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 TDP2O95551 362 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 PLA2G4BP0C869 781 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 TSPY3P0CV98 308 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 TSPY8P0CW00 308 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 NQO1P15559 274 aaKnown RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 LMNB1P20700 586 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 NR2F2P24468 414 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 KLRK1P26718 216 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 PON1P27169 355 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 PRDX5P30044 214 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 HIBADHP31937 336 aaKnown RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 CHRNA3P32297 505 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 GBP2P32456 591 aaPredicted RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 TXKP42681 527 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 CRKLP46109 303 aaKnown RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 EIF1AXP47813 144 aaKnown RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 PDE6CP51160 858 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 DNA2P51530 1060 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 PMS2P54278 862 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 GSTO1P78417 241 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 DR1Q01658 176 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 NRG1Q02297 640 aaPredicted RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 CCDC15Q0P6D6 951 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 MAPK7Q13164 816 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 LRRC41Q15345 812 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 EXOC3L4Q17RC7 722 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 ZNF568Q3ZCX4 644 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 ASPRV1Q53RT3 343 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 ODF2Q5BJF6 829 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 COL13A1Q5TAT6 717 aaPredicted RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 DENND2CQ68D51 928 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 CDCA2Q69YH5 1023 aaPredicted RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 C11orf63Q6NUN7 778 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 HIBCHQ6NVY1 386 aaPredicted RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 DYMQ7RTS9 669 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 TRPM8Q7Z2W7 1104 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 NCAPG2Q86XI2 1143 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 DZIP1Q86YF9 867 aaKnown RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 APLFQ8IW19 511 aaPredicted RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 LRRC34Q8IZ02 419 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 CFAP61Q8NHU2 1237 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 SLC30A5Q8TAD4 765 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 TTC9Q92623 222 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 HAS1Q92839 578 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 STAMBPL1Q96FJ0 436 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 DYNLL2Q96FJ2 89 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 ACSBG1Q96GR2 724 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 RUNDC3BQ96NL0 473 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 SPAG5Q96R06 1193 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 AP1M1Q9BXS5 423 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 FGFBP2Q9BYJ0 223 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 ELP3Q9H9T3 547 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 METTL14Q9HCE5 456 aaKnown RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 HOMER3Q9NSC5 361 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 GRHL1Q9NZI5 618 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 SAMD15Q9P1V8 674 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 KANSL3Q9P2N6 904 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 ARMCX3Q9UH62 379 aaPredicted RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 PCYOX1Q9UHG3 505 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 AMACRQ9UHK6 382 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 RASAL2Q9UJF2 1139 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 HDAC9Q9UKV0 1011 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 AMFRQ9UKV5 643 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 PNMA2Q9UL42 364 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 TRIM33Q9UPN9 1127 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 NIP7Q9Y221 180 aaKnown RBP eCLIP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 COL16A1Q07092 1604 aaPredicted RBP5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 PFASO15067 1338 aa5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 UBE4BO95155 1302 aa5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 MYO3BQ8WXR4 1341 aa5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 MYH7BA7E2Y1 1941 aa5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 CYP3A7-CYP3A51PA0A087WV96 503 aa5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 IGKV6D-41A0A0C4DH26 115 aa5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 A6NHS1 94 aa5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 MIF4GDA9UHW6 222 aaKnown RBP5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 E7ENQ6 273 aa5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 PODXLO00592 558 aa5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 CALUO43852 315 aaPredicted RBP5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 SNX3O60493 162 aa5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 SMNDC1O75940 238 aaKnown RBP eCLIP5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 MTA2O94776 668 aa5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 BAG3O95817 575 aa5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 FGGP02679 453 aa5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 PDGFAP04085 211 aa5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 SHBGP04278 402 aa5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 RPLP1P05386 114 aaKnown RBP5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 SSBP05455 408 aaKnown RBP eCLIP5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 CCNB1P14635 433 aa5.04□□□□□ -1.6
SMARCC1-206ENST00000485737 CYP11B2P19099 503 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms