RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 TTI2Q6NXR4 508 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 KCNT2Q6UVM3 1135 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 TMEM173Q86WV6 379 aaPredicted RBP16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 EFCAB13Q8IY85 973 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 MLKLQ8NB16 471 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 TMEM174Q8WUU8 243 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 ARNTL2Q8WYA1 636 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 KIF12Q96FN5 646 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 MED15Q96RN5 788 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 TSG101Q99816 390 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 DUSP9Q99956 384 aaKnown RBP16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 PAAF1Q9BRP4 392 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 GOLGA2P5Q9HBQ8 144 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 F8W810 466 aa16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 RFXAPO00287 272 aa16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 AKAP3O75969 853 aa16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 GALTP07902 379 aa16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 LAG3P18627 525 aa16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 IGFBP6P24592 240 aaPredicted RBP16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 POU5F1Q01860 360 aaKnown RBP16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 LRRC63Q05C16 580 aa16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 PAK1Q13153 545 aa16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 TUSC3Q13454 348 aa16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 MYBPC2Q14324 1141 aa16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 EDRF1Q3B7T1 1238 aa16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 PLEKHO2Q8TD55 490 aa16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 BCL7CQ8WUZ0 217 aaPredicted RBP16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 SYAP1Q96A49 352 aaPredicted RBP16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 FAM161BQ96MY7 647 aa16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 ZNF558Q96NG5 402 aa16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 ASB7Q9H672 318 aa16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 KIAA1586Q9HCI6 787 aa16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 TUBGCP4Q9UGJ1 667 aa16.81■□□□□ 0.28
RPUSD3-217ENST00000485705 PRRC2BQ5JSZ5 2229 aaKnown RBP16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 PTPRJQ12913 1337 aa16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 NRP1O14786 923 aa16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 IL18RAPO95256 599 aa16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 RPL13P26373 211 aaKnown RBP16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 OR1G1P47890 313 aa16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 CYP24A1Q07973 514 aa16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 SKOR2Q2VWA4 1001 aaPredicted RBP16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 LMBRD2Q68DH5 695 aaPredicted RBP16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 SASS6Q6UVJ0 657 aa16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 Q7L0L9 218 aa16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 CD302Q8IX05 232 aa16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 ZC3H3Q8IXZ2 948 aaKnown RBP16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 KLHL23Q8NBE8 558 aa16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 CCDC127Q96BQ5 260 aa16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 MFSD14AQ96MC6 490 aa16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 SAMD11Q96NU1 681 aa16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 TMEM175Q9BSA9 504 aa16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 GZF1Q9H116 711 aaPredicted RBP16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 MARCH5Q9NX47 278 aa16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 FAN1Q9Y2M0 1017 aa16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 PRG3Q9Y2Y8 225 aaPredicted RBP16.8■□□□□ 0.28
RPUSD3-217ENST00000485705 COL4A4P53420 1690 aaPredicted RBP16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 ATG2AQ2TAZ0 1938 aa16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 C5orf67F2Z3F1 127 aa16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 ALDH2P05091 517 aa16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 ALDH7A1P49419 539 aaKnown RBP16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 FKBP3Q00688 224 aaKnown RBP16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 GRIN2CQ14957 1233 aa16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 TMEM132DQ14C87 1099 aa16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 PSMD6Q15008 389 aa16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 ZNF697Q5TEC3 545 aa16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 SCARA3Q6AZY7 606 aa16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 SLC39A11Q8N1S5 342 aa16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 FBXO22Q8NEZ5 403 aa16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 POP1Q99575 1024 aaKnown RBP16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 AAASQ9NRG9 546 aa16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 SLC38A7Q9NVC3 462 aa16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 RWDD3Q9Y3V2 267 aa16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 PCDHB12Q9Y5F1 795 aa16.79■□□□□ 0.28
RPUSD3-217ENST00000485705 TMEM265A0A087WTH1 108 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 BICDL2A1A5D9 508 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 CETN3O15182 167 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 FGF18O76093 207 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 ITGB1P05556 798 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 DLATP10515 647 aaKnown RBP16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 CLCNKBP51801 687 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 TYRO3Q06418 890 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 SPATA1Q5VX52 437 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 C11orf57Q6ZUT1 292 aaPredicted RBP16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 FAM186BQ8IYM0 893 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 OR5B17Q8NGF7 314 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 HASPINQ8TF76 798 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 GDPD5Q8WTR4 605 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 PLVAPQ9BX97 442 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 PRDM12Q9H4Q4 367 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 ALG13Q9NP73 1137 aaKnown RBP16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 SPG21Q9NZD8 308 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 RWDD2AQ9UIY3 292 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 UBQLN1Q9UMX0 589 aaKnown RBP16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 FRMD4BQ9Y2L6 1034 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 DERAQ9Y315 318 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 C2CD2Q9Y426 696 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 TRANK1O15050 2925 aa16.78■□□□□ 0.28
RPUSD3-217ENST00000485705 VWA8A3KMH1 1905 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 SYCE3A1L190 88 aa16.77■□□□□ 0.28
RPUSD3-217ENST00000485705 PPEF2O14830 753 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms