RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 GARTP22102 1010 aa12.91□□□□□ -0.34
APTX-227ENST00000485479 SCP2P22307 547 aa12.91□□□□□ -0.34
APTX-227ENST00000485479 IGFBP4P22692 258 aa12.91□□□□□ -0.34
APTX-227ENST00000485479 ALDH7A1P49419 539 aaKnown RBP12.91□□□□□ -0.34
APTX-227ENST00000485479 CLCNKBP51801 687 aa12.91□□□□□ -0.34
APTX-227ENST00000485479 DSC1Q08554 894 aa12.91□□□□□ -0.34
APTX-227ENST00000485479 SNRNP35Q16560 246 aaKnown RBP12.91□□□□□ -0.34
APTX-227ENST00000485479 ELOA2Q8IYF1 753 aaPredicted RBP12.91□□□□□ -0.34
APTX-227ENST00000485479 ADSSL1Q8N142 457 aa12.91□□□□□ -0.34
APTX-227ENST00000485479 GUF1Q8N442 669 aaKnown RBP12.91□□□□□ -0.34
APTX-227ENST00000485479 C3orf58Q8NDZ4 430 aa12.91□□□□□ -0.34
APTX-227ENST00000485479 CCDC127Q96BQ5 260 aa12.91□□□□□ -0.34
APTX-227ENST00000485479 ZNF558Q96NG5 402 aa12.91□□□□□ -0.34
APTX-227ENST00000485479 PRRC2BQ5JSZ5 2229 aaKnown RBP12.91□□□□□ -0.34
APTX-227ENST00000485479 PPP1R3GB7ZBB8 358 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 EXTL3O43909 919 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 EXOC3O60645 756 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 KIF4AO95239 1232 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 MBD3O95983 291 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 DLATP10515 647 aaKnown RBP12.9□□□□□ -0.34
APTX-227ENST00000485479 LAG3P18627 525 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 NR2F2P24468 414 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 IRS1P35568 1242 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 GPM6BQ13491 265 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 ANKRD40Q6AI12 368 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 PLEKHO2Q8TD55 490 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 AUTS2Q8WXX7 1259 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 ELMO3Q96BJ8 720 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 CDX2Q99626 313 aaPredicted RBP12.9□□□□□ -0.34
APTX-227ENST00000485479 VN1R3Q9BXE9 311 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 MARCH5Q9NX47 278 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 PCDHB12Q9Y5F1 795 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 INPPL1O15357 1258 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 CA8P35219 290 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 TUSC3Q13454 348 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 CAMK1Q14012 370 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 ZCWPW2Q504Y3 356 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 XKR4Q5GH76 650 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 XXYLT1Q8NBI6 393 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 NELFBQ8WX92 580 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 KANSL3Q9P2N6 904 aa12.9□□□□□ -0.34
APTX-227ENST00000485479 PDXKO00764 312 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 AKAP3O75969 853 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 DLG4P78352 724 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 TFAMQ00059 246 aaKnown RBP12.89□□□□□ -0.35
APTX-227ENST00000485479 TAS1R1Q7RTX1 841 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 BRSK2Q8IWQ3 736 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 SLC39A11Q8N1S5 342 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 POF1BQ8WVV4 589 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 PPM1EQ8WY54 764 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 MTMR12Q9C0I1 747 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 GZF1Q9H116 711 aaPredicted RBP12.89□□□□□ -0.35
APTX-227ENST00000485479 MTMR10Q9NXD2 777 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 TRAF3IP3Q9Y228 551 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 FAN1Q9Y2M0 1017 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 H3BNC9 293 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 C2CD2LO14523 706 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 CALUO43852 315 aaPredicted RBP12.89□□□□□ -0.35
APTX-227ENST00000485479 KCNE1P15382 129 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 BRCC3P46736 316 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 TMEM132DQ14C87 1099 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 CCDC85BQ15834 202 aaPredicted RBP12.89□□□□□ -0.35
APTX-227ENST00000485479 HSP90AA4PQ58FG1 418 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 CCDC183Q5T5S1 534 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 OR5B17Q8NGF7 314 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 SPPL3Q8TCT6 385 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 IGSF21Q96ID5 467 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 MED15Q96RN5 788 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 C11orf84Q9BUA3 381 aaPredicted RBP12.89□□□□□ -0.35
APTX-227ENST00000485479 MMRN2Q9H8L6 949 aa12.89□□□□□ -0.35
APTX-227ENST00000485479 ZNF233A6NK53 670 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 C5orf67F2Z3F1 127 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 B3GAT3O94766 335 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 LDHAP00338 332 aaKnown RBP12.88□□□□□ -0.35
APTX-227ENST00000485479 ALDH2P05091 517 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 CDR1P51861 262 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 ERVFC1P60507 584 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 ADAM9Q13443 819 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 NFKBIBQ15653 356 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 PLPP4Q5VZY2 271 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 CENPPQ6IPU0 288 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 FAM43BQ6ZT52 329 aaPredicted RBP12.88□□□□□ -0.35
APTX-227ENST00000485479 P2RX5Q93086 422 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 TMEM169Q96HH4 297 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 FBXL18Q96ME1 805 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 GPR62Q9BZJ7 368 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.88□□□□□ -0.352e-7■■■■■ 86.5
APTX-227ENST00000485479 AAASQ9NRG9 546 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 DMAC2Q9NW81 257 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 SPG21Q9NZD8 308 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 SCN1AP35498 2009 aa12.88□□□□□ -0.35
APTX-227ENST00000485479 PODXLO00592 558 aa12.87□□□□□ -0.35
APTX-227ENST00000485479 PSMA7O14818 248 aa12.87□□□□□ -0.35
APTX-227ENST00000485479 KIF20AO95235 890 aa12.87□□□□□ -0.35
APTX-227ENST00000485479 TRIM49P0CI25 452 aa12.87□□□□□ -0.35
APTX-227ENST00000485479 TRIM49CP0CI26 452 aa12.87□□□□□ -0.35
APTX-227ENST00000485479 GTF2F1P35269 517 aaKnown RBP eCLIP12.87□□□□□ -0.35
APTX-227ENST00000485479 CYP24A1Q07973 514 aa12.87□□□□□ -0.35
APTX-227ENST00000485479 HSP90AA2PQ14568 343 aaPredicted RBP12.87□□□□□ -0.35
APTX-227ENST00000485479 UPP1Q16831 310 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms