RNA–Protein interactions for RNA: ENST00000485476.2

LDLRAP1-206, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 5

Gene LDLRAP1, Length 238 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-206ENST00000485476 PTPN2P17706 415 aa13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 NRLP54845 237 aa13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 MLLT6P55198 1093 aaPredicted RBP13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 TRIM29Q14134 588 aa13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 TMEM132AQ24JP5 1023 aa13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 XKR4Q5GH76 650 aa13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 SLC8B1Q6J4K2 584 aa13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 CDR2LQ86X02 465 aaPredicted RBP13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 CATSPER3Q86XQ3 398 aa13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 NPAS3Q8IXF0 933 aa13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 ZNF461Q8TAF7 563 aa13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 DEPTORQ8TB45 409 aa13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 ITFG1Q8TB96 612 aa13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 KIFAP3Q92845 792 aa13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 IFT74Q96LB3 600 aa13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 GJB4Q9NTQ9 266 aa13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 SLC38A7Q9NVC3 462 aa13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 DNMT3BQ9UBC3 853 aaKnown RBP13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 MRPS23Q9Y3D9 190 aaKnown RBP13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.14□□□□□ -0.31
LDLRAP1-206ENST00000485476 POTEMA6NI47 508 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 BTBD18B2RXH4 712 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 SYN3O14994 580 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 ADAM12O43184 909 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 ABLIM3O94929 683 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 ELF1P32519 619 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 NTHL1P78549 312 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 ADCY1Q08828 1119 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 PPP2R5DQ14738 602 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 UBXN2BQ14CS0 331 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 UPP1Q16831 310 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 HAUS3Q68CZ6 603 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 C1orf228Q6PIY5 440 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 PADI6Q6TGC4 694 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 DIS3L2Q8IYB7 885 aaKnown RBP13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 LEMD2Q8NC56 503 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 RABGGTAQ92696 567 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 GTF3C6Q969F1 213 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 GPRC5CQ9NQ84 441 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 PRMT8Q9NR22 394 aaPredicted RBP13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 TOPORSQ9NS56 1045 aaPredicted RBP13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 KCNG1Q9UIX4 513 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 POLIQ9UNA4 740 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 FANCMQ8IYD8 2048 aa13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 TDRD15B5MCY1 1934 aaKnown RBP13.13□□□□□ -0.31
LDLRAP1-206ENST00000485476 ARHGEF35A5YM69 484 aa13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 FAM205CA6NFA0 338 aa13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 H7C4K7 107 aa13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 RHOP08100 348 aa13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 RPL9P32969 192 aaKnown RBP13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 LMNB2Q03252 620 aa13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 CSTF1Q05048 431 aaKnown RBP13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 SAFBQ15424 915 aaKnown RBP eCLIP13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 TPGS2Q68CL5 300 aa13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 ALKAL1Q6UXT8 129 aa13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 NOSTRINQ8IVI9 506 aa13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 TCEAL8Q8IYN2 117 aa13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 HASPINQ8TF76 798 aa13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 MSANTD3Q96H12 275 aa13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 OXCT2Q9BYC2 517 aaPredicted RBP13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 NCDNQ9UBB6 729 aa13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 TNFSF13BQ9Y275 285 aa13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 CDY1Q9Y6F8 540 aa13.12□□□□□ -0.31
LDLRAP1-206ENST00000485476 NCOR2Q9Y618 2525 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 MED19A0JLT2 244 aaPredicted RBP13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 LRP3O75074 770 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 MED24O75448 989 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 LRG1P02750 347 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 ATF2P15336 505 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 GRM5P41594 1212 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 YARSP54577 528 aaKnown RBP13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 MRPL58Q14197 206 aaKnown RBP13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 RSPO4Q2I0M5 234 aaPredicted RBP13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 ATF7IP2Q5U623 682 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 CD300LGQ6UXG3 332 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 TPRG1Q6ZUI0 275 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 MAEAQ7L5Y9 396 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 CELF5Q8N6W0 485 aaKnown RBP13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 NSUN7Q8NE18 718 aaKnown RBP13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 IRF7Q92985 503 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 E2F7Q96AV8 911 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 KXD1Q9BQD3 176 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 GPR88Q9GZN0 384 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 TMEM60Q9H2L4 133 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 TMEM134Q9H6X4 195 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 TRPV4Q9HBA0 871 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 ZFP14Q9HCL3 533 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 MTF2Q9Y483 593 aaPredicted RBP13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 RBM19Q9Y4C8 960 aaKnown RBP13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 ARID2Q68CP9 1835 aa13.11□□□□□ -0.31
LDLRAP1-206ENST00000485476 SMIM28A0A1B0GU29 152 aa13.1□□□□□ -0.31
LDLRAP1-206ENST00000485476 TTLL13PA6NNM8 815 aa13.1□□□□□ -0.31
LDLRAP1-206ENST00000485476 K7ERI5 159 aa13.1□□□□□ -0.31
LDLRAP1-206ENST00000485476 FOXD2O60548 495 aaPredicted RBP13.1□□□□□ -0.31
LDLRAP1-206ENST00000485476 LRRN2O75325 713 aa13.1□□□□□ -0.31
LDLRAP1-206ENST00000485476 KCNE1P15382 129 aa13.1□□□□□ -0.31
LDLRAP1-206ENST00000485476 TARSP26639 723 aaKnown RBP13.1□□□□□ -0.31
LDLRAP1-206ENST00000485476 TRAPPC10P48553 1259 aa13.1□□□□□ -0.31
LDLRAP1-206ENST00000485476 CLCNKBP51801 687 aa13.1□□□□□ -0.31
LDLRAP1-206ENST00000485476 FZD5Q13467 585 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms