RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 GTF2H1P32780 548 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 SCNN1GP51170 649 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 COPB1P53618 953 aaKnown RBP19.03■□□□□ 0.64
CHMP3-207ENST00000485465 PPP3CAQ08209 521 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 TMEM132DQ14C87 1099 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 ZBTB6Q15916 424 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 UVSSAQ2YD98 709 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 VWA3BQ502W6 1294 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 NOMO2Q5JPE7 1267 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 GLRA4Q5JXX5 417 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 RASIP1Q5U651 963 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 LMBRD2Q68DH5 695 aaPredicted RBP19.03■□□□□ 0.64
CHMP3-207ENST00000485465 APTXQ7Z2E3 356 aaKnown RBP19.03■□□□□ 0.64
CHMP3-207ENST00000485465 NT5DC4Q86YG4 428 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 ABI1Q8IZP0 508 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 URGCPQ8TCY9 931 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 ZNF516Q92618 1163 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 CASD1Q96PB1 797 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 GDF15Q99988 308 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 TMEM117Q9H0C3 514 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 INTS13Q9NVM9 706 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 INPP5FQ9Y2H2 1132 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 SLC4A7Q9Y6M7 1214 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 TTC3P53804 2025 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 DGKIO75912 1065 aa19.02■□□□□ 0.64
CHMP3-207ENST00000485465 AFPP02771 609 aaKnown RBP19.02■□□□□ 0.64
CHMP3-207ENST00000485465 THP07101 528 aa19.02■□□□□ 0.64
CHMP3-207ENST00000485465 TPM2P07951 284 aa19.02■□□□□ 0.64
CHMP3-207ENST00000485465 GATMP50440 423 aa19.02■□□□□ 0.64
CHMP3-207ENST00000485465 AP3M2P53677 418 aa19.02■□□□□ 0.64
CHMP3-207ENST00000485465 TFAMQ00059 246 aaKnown RBP19.02■□□□□ 0.64
CHMP3-207ENST00000485465 FANCCQ00597 558 aa19.02■□□□□ 0.64
CHMP3-207ENST00000485465 KCNH2Q12809 1159 aa19.02■□□□□ 0.64
CHMP3-207ENST00000485465 DUOXA2Q1HG44 320 aa19.02■□□□□ 0.64
CHMP3-207ENST00000485465 MIIPQ5JXC2 388 aa19.02■□□□□ 0.64
CHMP3-207ENST00000485465 C9orf50Q5SZB4 431 aa19.02■□□□□ 0.64
CHMP3-207ENST00000485465 TMCO2Q7Z6W1 182 aaPredicted RBP19.02■□□□□ 0.64
CHMP3-207ENST00000485465 OR5B17Q8NGF7 314 aa19.02■□□□□ 0.64
CHMP3-207ENST00000485465 PHOSPHO2Q8TCD6 241 aa19.02■□□□□ 0.64
CHMP3-207ENST00000485465 CACTINQ8WUQ7 758 aaKnown RBP19.02■□□□□ 0.64
CHMP3-207ENST00000485465 RSPH1Q8WYR4 309 aa19.02■□□□□ 0.64
CHMP3-207ENST00000485465 FAM84AQ96KN4 292 aa19.02■□□□□ 0.64
CHMP3-207ENST00000485465 PPP1R10Q96QC0 940 aaKnown RBP19.02■□□□□ 0.64
CHMP3-207ENST00000485465 VPS16Q9H269 839 aa19.02■□□□□ 0.64
CHMP3-207ENST00000485465 PLAGL2Q9UPG8 496 aa19.02■□□□□ 0.64
CHMP3-207ENST00000485465 RALGAPA2Q2PPJ7 1873 aa19.01■□□□□ 0.63
CHMP3-207ENST00000485465 SERPINC1P01008 464 aa19.01■□□□□ 0.63
CHMP3-207ENST00000485465 POMCP01189 267 aa19.01■□□□□ 0.63
CHMP3-207ENST00000485465 C4BPAP04003 597 aaKnown RBP19.01■□□□□ 0.63
CHMP3-207ENST00000485465 TMEM191BP0C7N4 346 aa19.01■□□□□ 0.63
CHMP3-207ENST00000485465 GCLMP48507 274 aa19.01■□□□□ 0.63
CHMP3-207ENST00000485465 GRIK3Q13003 919 aa19.01■□□□□ 0.63
CHMP3-207ENST00000485465 SHHQ15465 462 aa19.01■□□□□ 0.63
CHMP3-207ENST00000485465 FAM117BQ6P1L5 589 aa19.01■□□□□ 0.63
CHMP3-207ENST00000485465 C18orf25Q96B23 403 aaPredicted RBP19.01■□□□□ 0.63
CHMP3-207ENST00000485465 ANKRD36BP1Q96IX9 119 aa19.01■□□□□ 0.63
CHMP3-207ENST00000485465 SLC9A7Q96T83 725 aa19.01■□□□□ 0.63
CHMP3-207ENST00000485465 UBE2OQ9C0C9 1292 aaKnown RBP19.01■□□□□ 0.63
CHMP3-207ENST00000485465 MTMR12Q9C0I1 747 aa19.01■□□□□ 0.63
CHMP3-207ENST00000485465 NDST4Q9H3R1 872 aa19.01■□□□□ 0.63
CHMP3-207ENST00000485465 MMRN2Q9H8L6 949 aa19.01■□□□□ 0.63
CHMP3-207ENST00000485465 TMEM8AQ9HCN3 771 aa19.01■□□□□ 0.63
CHMP3-207ENST00000485465 SLC38A7Q9NVC3 462 aa19.01■□□□□ 0.63
CHMP3-207ENST00000485465 KANSL3Q9P2N6 904 aa19.01■□□□□ 0.63
CHMP3-207ENST00000485465 UBQLN1Q9UMX0 589 aaKnown RBP19.01■□□□□ 0.63
CHMP3-207ENST00000485465 FSD2A1L4K1 749 aa19■□□□□ 0.63
CHMP3-207ENST00000485465 GOLGA6L3A6NEY3 463 aa19■□□□□ 0.63
CHMP3-207ENST00000485465 TBKBP1A7MCY6 615 aa19■□□□□ 0.63
CHMP3-207ENST00000485465 XPOTO43592 962 aaKnown RBP19■□□□□ 0.63
CHMP3-207ENST00000485465 TNNC2P02585 160 aa19■□□□□ 0.63
CHMP3-207ENST00000485465 CYP3A5P20815 502 aa19■□□□□ 0.63
CHMP3-207ENST00000485465 FMO5P49326 533 aa19■□□□□ 0.63
CHMP3-207ENST00000485465 NAB2Q15742 525 aa19■□□□□ 0.63
CHMP3-207ENST00000485465 CBWD6Q4V339 395 aa19■□□□□ 0.63
CHMP3-207ENST00000485465 CBWD3Q5JTY5 395 aa19■□□□□ 0.63
CHMP3-207ENST00000485465 CBWD5Q5RIA9 395 aa19■□□□□ 0.63
CHMP3-207ENST00000485465 C15orf39Q6ZRI6 1047 aa19■□□□□ 0.63
CHMP3-207ENST00000485465 SV2AQ7L0J3 742 aa19■□□□□ 0.63
CHMP3-207ENST00000485465 TRAPPC11Q7Z392 1133 aa19■□□□□ 0.63
CHMP3-207ENST00000485465 BEST2Q8NFU1 509 aa19■□□□□ 0.63
CHMP3-207ENST00000485465 ZNF689Q96CS4 500 aaPredicted RBP19■□□□□ 0.63
CHMP3-207ENST00000485465 TBC1D13Q9NVG8 400 aa19■□□□□ 0.63
CHMP3-207ENST00000485465 TUBGCP4Q9UGJ1 667 aa19■□□□□ 0.63
CHMP3-207ENST00000485465 ANK1P16157 1881 aa19■□□□□ 0.63
CHMP3-207ENST00000485465 PES1O00541 588 aaKnown RBP18.99■□□□□ 0.63
CHMP3-207ENST00000485465 PMM2O15305 246 aa18.99■□□□□ 0.63
CHMP3-207ENST00000485465 N4BP1O75113 896 aaKnown RBP18.99■□□□□ 0.63
CHMP3-207ENST00000485465 GJB5O95377 273 aa18.99■□□□□ 0.63
CHMP3-207ENST00000485465 ATP2A2P16615 1042 aaKnown RBP18.99■□□□□ 0.63
CHMP3-207ENST00000485465 MXI1P50539 228 aa18.99■□□□□ 0.63
CHMP3-207ENST00000485465 GUCY2FP51841 1108 aa18.99■□□□□ 0.63
CHMP3-207ENST00000485465 MLLT1Q03111 559 aaPredicted RBP18.99■□□□□ 0.63
CHMP3-207ENST00000485465 ZACNQ401N2 412 aa18.99■□□□□ 0.63
CHMP3-207ENST00000485465 FILIP1LQ4L180 1135 aa18.99■□□□□ 0.63
CHMP3-207ENST00000485465 TDRD10Q5VZ19 366 aaKnown RBP18.99■□□□□ 0.63
CHMP3-207ENST00000485465 KRT39Q6A163 491 aa18.99■□□□□ 0.63
CHMP3-207ENST00000485465 HERC6Q8IVU3 1022 aa18.99■□□□□ 0.63
CHMP3-207ENST00000485465 RNPC3Q96LT9 517 aaKnown RBP18.99■□□□□ 0.63
CHMP3-207ENST00000485465 NAP1L5Q96NT1 182 aaPredicted RBP18.99■□□□□ 0.63
CHMP3-207ENST00000485465 MRPL9Q9BYD2 267 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms