RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 DNM3Q9UQ16 869 aa21.13■□□□□ 0.97
COL27A1-205ENST00000485397 STK24Q9Y6E0 443 aa21.13■□□□□ 0.97
COL27A1-205ENST00000485397 USP34Q70CQ2 3546 aa21.13■□□□□ 0.97
COL27A1-205ENST00000485397 PHLPP2Q6ZVD8 1323 aa21.12■□□□□ 0.97
COL27A1-205ENST00000485397 HOXA9P31269 272 aa21.12■□□□□ 0.97
COL27A1-205ENST00000485397 GRM5P41594 1212 aa21.12■□□□□ 0.97
COL27A1-205ENST00000485397 ZNF568Q3ZCX4 644 aa21.12■□□□□ 0.97
COL27A1-205ENST00000485397 KRT79Q5XKE5 535 aa21.12■□□□□ 0.97
COL27A1-205ENST00000485397 KCNK18Q7Z418 384 aa21.12■□□□□ 0.97
COL27A1-205ENST00000485397 ITFG1Q8TB96 612 aa21.12■□□□□ 0.97
COL27A1-205ENST00000485397 NKD2Q969F2 451 aaPredicted RBP21.12■□□□□ 0.97
COL27A1-205ENST00000485397 DDX27Q96GQ7 796 aaKnown RBP21.12■□□□□ 0.97
COL27A1-205ENST00000485397 UROC1Q96N76 676 aa21.12■□□□□ 0.97
COL27A1-205ENST00000485397 MMTAG2Q9BU76 263 aaKnown RBP21.12■□□□□ 0.97
COL27A1-205ENST00000485397 CCDC94Q9BW85 323 aaPredicted RBP21.12■□□□□ 0.97
COL27A1-205ENST00000485397 TMEM134Q9H6X4 195 aa21.12■□□□□ 0.97
COL27A1-205ENST00000485397 ARHGEF3Q9NR81 526 aa21.12■□□□□ 0.97
COL27A1-205ENST00000485397 HCFC1R1Q9NWW0 138 aa21.12■□□□□ 0.97
COL27A1-205ENST00000485397 CDY1Q9Y6F8 540 aa21.12■□□□□ 0.97
COL27A1-205ENST00000485397 ZFP37Q9Y6Q3 630 aaPredicted RBP21.12■□□□□ 0.97
COL27A1-205ENST00000485397 TRIP11Q15643 1979 aa21.11■□□□□ 0.97
COL27A1-205ENST00000485397 XYLBO75191 536 aa21.11■□□□□ 0.97
COL27A1-205ENST00000485397 YARSP54577 528 aaKnown RBP21.11■□□□□ 0.97
COL27A1-205ENST00000485397 MAPK7Q13164 816 aa21.11■□□□□ 0.97
COL27A1-205ENST00000485397 DMP1Q13316 513 aaPredicted RBP21.11■□□□□ 0.97
COL27A1-205ENST00000485397 XKR4Q5GH76 650 aa21.11■□□□□ 0.97
COL27A1-205ENST00000485397 RINT1Q6NUQ1 792 aa21.11■□□□□ 0.97
COL27A1-205ENST00000485397 ALKAL1Q6UXT8 129 aa21.11■□□□□ 0.97
COL27A1-205ENST00000485397 FGF13Q92913 245 aa21.11■□□□□ 0.97
COL27A1-205ENST00000485397 ZMAT2Q96NC0 199 aaKnown RBP21.11■□□□□ 0.97
COL27A1-205ENST00000485397 MRPL4Q9BYD3 311 aaKnown RBP21.11■□□□□ 0.97
COL27A1-205ENST00000485397 KMT5AQ9NQR1 393 aa21.11■□□□□ 0.97
COL27A1-205ENST00000485397 SLC2A4RGQ9NR83 387 aa21.11■□□□□ 0.97
COL27A1-205ENST00000485397 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.11■□□□□ 0.97
COL27A1-205ENST00000485397 ARHGAP28Q9P2N2 729 aa21.11■□□□□ 0.97
COL27A1-205ENST00000485397 BACE2Q9Y5Z0 518 aa21.11■□□□□ 0.97
COL27A1-205ENST00000485397 SFI1A8K8P3 1242 aa21.1■□□□□ 0.97
COL27A1-205ENST00000485397 DCNP07585 359 aaKnown RBP21.1■□□□□ 0.97
COL27A1-205ENST00000485397 GPC5P78333 572 aa21.1■□□□□ 0.97
COL27A1-205ENST00000485397 UVSSAQ2YD98 709 aa21.1■□□□□ 0.97
COL27A1-205ENST00000485397 SPECC1Q5M775 1068 aa21.1■□□□□ 0.97
COL27A1-205ENST00000485397 PHLDB3Q6NSJ2 640 aa21.1■□□□□ 0.97
COL27A1-205ENST00000485397 DTHD1Q6ZMT9 781 aa21.1■□□□□ 0.97
COL27A1-205ENST00000485397 C1orf186Q6ZWK4 172 aa21.1■□□□□ 0.97
COL27A1-205ENST00000485397 DNMT3BQ9UBC3 853 aaKnown RBP21.1■□□□□ 0.97
COL27A1-205ENST00000485397 DAXXQ9UER7 740 aaPredicted RBP21.1■□□□□ 0.97
COL27A1-205ENST00000485397 LAD1O00515 517 aa21.09■□□□□ 0.97
COL27A1-205ENST00000485397 ABLIM1O14639 778 aa21.09■□□□□ 0.97
COL27A1-205ENST00000485397 SLC16A4O15374 487 aa21.09■□□□□ 0.97
COL27A1-205ENST00000485397 TRAPPC3O43617 180 aa21.09■□□□□ 0.97
COL27A1-205ENST00000485397 ZRSR1Q15695 479 aaKnown RBP21.09■□□□□ 0.97
COL27A1-205ENST00000485397 ANKS3Q6ZW76 656 aa21.09■□□□□ 0.97
COL27A1-205ENST00000485397 ZBTB45Q96K62 511 aaPredicted RBP21.09■□□□□ 0.97
COL27A1-205ENST00000485397 SNX27Q96L92 541 aa21.09■□□□□ 0.97
COL27A1-205ENST00000485397 DRC1Q96MC2 740 aa21.09■□□□□ 0.97
COL27A1-205ENST00000485397 TCHPQ9BT92 498 aa21.09■□□□□ 0.97
COL27A1-205ENST00000485397 TOPORSQ9NS56 1045 aaPredicted RBP21.09■□□□□ 0.97
COL27A1-205ENST00000485397 PODXLO00592 558 aa21.08■□□□□ 0.97
COL27A1-205ENST00000485397 MEFVO15553 781 aaPredicted RBP21.08■□□□□ 0.97
COL27A1-205ENST00000485397 POU2F2P09086 479 aa21.08■□□□□ 0.97
COL27A1-205ENST00000485397 MCF2P10911 925 aa21.08■□□□□ 0.97
COL27A1-205ENST00000485397 HARSP12081 509 aaKnown RBP21.08■□□□□ 0.97
COL27A1-205ENST00000485397 PROZP22891 400 aa21.08■□□□□ 0.97
COL27A1-205ENST00000485397 PRPHP41219 470 aa21.08■□□□□ 0.97
COL27A1-205ENST00000485397 RAD51AP2Q09MP3 1159 aa21.08■□□□□ 0.97
COL27A1-205ENST00000485397 C8orf34Q49A92 452 aa21.08■□□□□ 0.97
COL27A1-205ENST00000485397 RIF1Q5UIP0 2472 aaKnown RBP21.08■□□□□ 0.97
COL27A1-205ENST00000485397 ING5Q8WYH8 240 aa21.08■□□□□ 0.97
COL27A1-205ENST00000485397 ACAP3Q96P50 834 aa21.08■□□□□ 0.97
COL27A1-205ENST00000485397 FOXQ1Q9C009 403 aa21.08■□□□□ 0.97
COL27A1-205ENST00000485397 SIT1Q9Y3P8 196 aa21.08■□□□□ 0.97
COL27A1-205ENST00000485397 RBM19Q9Y4C8 960 aaKnown RBP21.08■□□□□ 0.97
COL27A1-205ENST00000485397 PABPC1LQ4VXU2 614 aaKnown RBP21.07■□□□□ 0.96
COL27A1-205ENST00000485397 VARS2Q5ST30 1063 aaKnown RBP21.07■□□□□ 0.96
COL27A1-205ENST00000485397 MCTP1Q6DN14 999 aa21.07■□□□□ 0.96
COL27A1-205ENST00000485397 MPZL3Q6UWV2 235 aa21.07■□□□□ 0.96
COL27A1-205ENST00000485397 MTSS1LQ765P7 747 aa21.07■□□□□ 0.96
COL27A1-205ENST00000485397 NPAS3Q8IXF0 933 aa21.07■□□□□ 0.96
COL27A1-205ENST00000485397 C18orf25Q96B23 403 aaPredicted RBP21.07■□□□□ 0.96
COL27A1-205ENST00000485397 PNMA5Q96PV4 448 aa21.07■□□□□ 0.96
COL27A1-205ENST00000485397 PLIN2Q99541 437 aa21.07■□□□□ 0.96
COL27A1-205ENST00000485397 SLC38A7Q9NVC3 462 aa21.07■□□□□ 0.96
COL27A1-205ENST00000485397 DLGAP2Q9P1A6 1054 aa21.07■□□□□ 0.96
COL27A1-205ENST00000485397 FAM186AA6NE01 2351 aa21.07■□□□□ 0.96
COL27A1-205ENST00000485397 MYO15AQ9UKN7 3530 aa21.06■□□□□ 0.96
COL27A1-205ENST00000485397 NOTCH4Q99466 2003 aa21.06■□□□□ 0.96
COL27A1-205ENST00000485397 LRRN2O75325 713 aa21.06■□□□□ 0.96
COL27A1-205ENST00000485397 KCNE1P15382 129 aa21.06■□□□□ 0.96
COL27A1-205ENST00000485397 GUCY2CP25092 1073 aa21.06■□□□□ 0.96
COL27A1-205ENST00000485397 ARPP19P56211 112 aa21.06■□□□□ 0.96
COL27A1-205ENST00000485397 ROR1Q01973 937 aa21.06■□□□□ 0.96
COL27A1-205ENST00000485397 SNW1Q13573 536 aaKnown RBP21.06■□□□□ 0.96
COL27A1-205ENST00000485397 SEZ6Q53EL9 994 aa21.06■□□□□ 0.96
COL27A1-205ENST00000485397 RTL10Q7L3V2 364 aa21.06■□□□□ 0.96
COL27A1-205ENST00000485397 ADSSL1Q8N142 457 aa21.06■□□□□ 0.96
COL27A1-205ENST00000485397 KXD1Q9BQD3 176 aa21.06■□□□□ 0.96
COL27A1-205ENST00000485397 NTPCRQ9BSD7 190 aaKnown RBP21.06■□□□□ 0.96
COL27A1-205ENST00000485397 C17orf75Q9HAS0 396 aa21.06■□□□□ 0.96
COL27A1-205ENST00000485397 CNTN3Q9P232 1028 aa21.06■□□□□ 0.96
COL27A1-205ENST00000485397 KCNH3Q9ULD8 1083 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms