RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 RAB20Q9NX57 234 aa18.88■□□□□ 0.61
CCDC78-214ENST00000485091 SQORQ9Y6N5 450 aa18.88■□□□□ 0.61
CCDC78-214ENST00000485091 PIK3CAP42336 1068 aa18.88■□□□□ 0.61
CCDC78-214ENST00000485091 ZACNQ401N2 412 aa18.88■□□□□ 0.61
CCDC78-214ENST00000485091 FIGNQ5HY92 759 aa18.88■□□□□ 0.61
CCDC78-214ENST00000485091 KLHDC7AQ5VTJ3 777 aa18.88■□□□□ 0.61
CCDC78-214ENST00000485091 C1orf53Q5VUE5 145 aa18.88■□□□□ 0.61
CCDC78-214ENST00000485091 SCARA3Q6AZY7 606 aa18.88■□□□□ 0.61
CCDC78-214ENST00000485091 DPY19L2P1Q6NXN4 242 aa18.88■□□□□ 0.61
CCDC78-214ENST00000485091 CNGA4Q8IV77 575 aa18.88■□□□□ 0.61
CCDC78-214ENST00000485091 LMO3Q8TAP4 145 aa18.88■□□□□ 0.61
CCDC78-214ENST00000485091 ANKRD36BP1Q96IX9 119 aa18.88■□□□□ 0.61
CCDC78-214ENST00000485091 TOX2Q96NM4 488 aa18.88■□□□□ 0.61
CCDC78-214ENST00000485091 PI4K2AQ9BTU6 479 aa18.88■□□□□ 0.61
CCDC78-214ENST00000485091 KCNF1Q9H3M0 494 aa18.88■□□□□ 0.61
CCDC78-214ENST00000485091 PLCB1Q9NQ66 1216 aa18.88■□□□□ 0.61
CCDC78-214ENST00000485091 PITPNM1O00562 1244 aa18.87■□□□□ 0.61
CCDC78-214ENST00000485091 NBNO60934 754 aa18.87■□□□□ 0.61
CCDC78-214ENST00000485091 HLA-DRAP01903 254 aa18.87■□□□□ 0.61
CCDC78-214ENST00000485091 TNNC2P02585 160 aa18.87■□□□□ 0.61
CCDC78-214ENST00000485091 CYP2C18P33260 490 aa18.87■□□□□ 0.61
CCDC78-214ENST00000485091 GLRA4Q5JXX5 417 aa18.87■□□□□ 0.61
CCDC78-214ENST00000485091 C15orf39Q6ZRI6 1047 aa18.87■□□□□ 0.61
CCDC78-214ENST00000485091 RRAGAQ7L523 313 aa18.87■□□□□ 0.61
CCDC78-214ENST00000485091 TRAPPC11Q7Z392 1133 aa18.87■□□□□ 0.61
CCDC78-214ENST00000485091 RNF169Q8NCN4 708 aa18.87■□□□□ 0.61
CCDC78-214ENST00000485091 ZNF397Q8NF99 534 aaPredicted RBP18.87■□□□□ 0.61
CCDC78-214ENST00000485091 LPPQ93052 612 aa18.87■□□□□ 0.61
CCDC78-214ENST00000485091 KIF12Q96FN5 646 aa18.87■□□□□ 0.61
CCDC78-214ENST00000485091 SNX27Q96L92 541 aa18.87■□□□□ 0.61
CCDC78-214ENST00000485091 ASB7Q9H672 318 aa18.87■□□□□ 0.61
CCDC78-214ENST00000485091 TMEM39AQ9NV64 488 aa18.87■□□□□ 0.61
CCDC78-214ENST00000485091 CEP72Q9P209 647 aa18.87■□□□□ 0.61
CCDC78-214ENST00000485091 AJAP1Q9UKB5 411 aaPredicted RBP18.87■□□□□ 0.61
CCDC78-214ENST00000485091 FHOD1Q9Y613 1164 aa18.87■□□□□ 0.61
CCDC78-214ENST00000485091 PMM2O15305 246 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 VNN1O95497 513 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 UCHL3P15374 230 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 AP3M2P53677 418 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 DSC3Q14574 896 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 TMEM132DQ14C87 1099 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 ARHGEF19Q8IW93 802 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 ABHD10Q9NUJ1 306 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 COQ4Q9Y3A0 265 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.86■□□□□ 0.61
CCDC78-214ENST00000485091 A0A1W2PQJ5 194 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 MEIS3P2A8K0S8 358 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 CST3P01034 146 aaPredicted RBP18.86■□□□□ 0.61
CCDC78-214ENST00000485091 KRT19P08727 400 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 ITGA4P13612 1032 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 RGS19P49795 217 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 GUCY2FP51841 1108 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 ZBED6P86452 979 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 POU5F1Q01860 360 aaKnown RBP18.86■□□□□ 0.61
CCDC78-214ENST00000485091 RAPGEF1Q13905 1077 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 GPNMBQ14956 572 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 IQCEQ6IPM2 695 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 PHLDB3Q6NSJ2 640 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 IQCDQ96DY2 449 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 UBE2TQ9NPD8 197 aaPredicted RBP18.86■□□□□ 0.61
CCDC78-214ENST00000485091 PRDM5Q9NQX1 630 aaPredicted RBP18.86■□□□□ 0.61
CCDC78-214ENST00000485091 APEX2Q9UBZ4 518 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 DNAJC12Q9UKB3 198 aa18.86■□□□□ 0.61
CCDC78-214ENST00000485091 ANK1P16157 1881 aa18.85■□□□□ 0.61
CCDC78-214ENST00000485091 LRRC53A6NM62 1247 aa18.85■□□□□ 0.61
CCDC78-214ENST00000485091 CLTBP09497 229 aa18.85■□□□□ 0.61
CCDC78-214ENST00000485091 NCOA4Q13772 614 aa18.85■□□□□ 0.61
CCDC78-214ENST00000485091 ARHGAP44Q17R89 818 aa18.85■□□□□ 0.61
CCDC78-214ENST00000485091 CD302Q8IX05 232 aa18.85■□□□□ 0.61
CCDC78-214ENST00000485091 BAP1Q92560 729 aa18.85■□□□□ 0.61
CCDC78-214ENST00000485091 ZMAT2Q96NC0 199 aaKnown RBP18.85■□□□□ 0.61
CCDC78-214ENST00000485091 WNT8AQ9H1J5 351 aa18.85■□□□□ 0.61
CCDC78-214ENST00000485091 PLEKHA5Q9HAU0 1116 aa18.85■□□□□ 0.61
CCDC78-214ENST00000485091 TRPC3Q13507 836 aa18.84■□□□□ 0.61
CCDC78-214ENST00000485091 TSR1Q2NL82 804 aaKnown RBP18.84■□□□□ 0.61
CCDC78-214ENST00000485091 SPOPLQ6IQ16 392 aa18.84■□□□□ 0.61
CCDC78-214ENST00000485091 DEFB128Q7Z7B8 93 aa18.84■□□□□ 0.61
CCDC78-214ENST00000485091 RTN4RL1Q86UN2 441 aaPredicted RBP18.84■□□□□ 0.61
CCDC78-214ENST00000485091 HACE1Q8IYU2 909 aa18.84■□□□□ 0.61
CCDC78-214ENST00000485091 PPM1KQ8N3J5 372 aa18.84■□□□□ 0.61
CCDC78-214ENST00000485091 DBF4BQ8NFT6 615 aa18.84■□□□□ 0.61
CCDC78-214ENST00000485091 OR8K1Q8NGG5 319 aa18.84■□□□□ 0.61
CCDC78-214ENST00000485091 TATDN2Q93075 761 aa18.84■□□□□ 0.61
CCDC78-214ENST00000485091 NT5C1BQ96P26 610 aa18.84■□□□□ 0.61
CCDC78-214ENST00000485091 SPAG5Q96R06 1193 aa18.84■□□□□ 0.61
CCDC78-214ENST00000485091 PCDH10Q9P2E7 1040 aa18.84■□□□□ 0.61
CCDC78-214ENST00000485091 TBX21Q9UL17 535 aa18.84■□□□□ 0.61
CCDC78-214ENST00000485091 ITGB3P05106 788 aa18.83■□□□□ 0.61
CCDC78-214ENST00000485091 WDR44Q5JSH3 913 aa18.83■□□□□ 0.61
CCDC78-214ENST00000485091 PDXDC1Q6P996 788 aa18.83■□□□□ 0.61
CCDC78-214ENST00000485091 ALKAL1Q6UXT8 129 aa18.83■□□□□ 0.61
CCDC78-214ENST00000485091 C1orf127Q8N9H9 656 aa18.83■□□□□ 0.61
CCDC78-214ENST00000485091 KAT5Q92993 513 aa18.83■□□□□ 0.61
CCDC78-214ENST00000485091 PANX2Q96RD6 677 aa18.83■□□□□ 0.61
CCDC78-214ENST00000485091 EDEM3Q9BZQ6 932 aa18.83■□□□□ 0.61
CCDC78-214ENST00000485091 RGS18Q9NS28 235 aa18.83■□□□□ 0.61
CCDC78-214ENST00000485091 CNTN3Q9P232 1028 aa18.83■□□□□ 0.61
CCDC78-214ENST00000485091 KIAA0100Q14667 2235 aaKnown RBP18.83■□□□□ 0.6
CCDC78-214ENST00000485091 PNMA6AP0CW24 399 aaPredicted RBP18.83■□□□□ 0.6
CCDC78-214ENST00000485091 RAB27AP51159 221 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms