RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 AVENQ9NQS1 362 aaPredicted RBP19.99■□□□□ 0.79
DDR1-245ENST00000484556 WDR27A2RRH5 827 aa19.98■□□□□ 0.79
DDR1-245ENST00000484556 SLC38A8A6NNN8 435 aa19.98■□□□□ 0.79
DDR1-245ENST00000484556 ZNF263O14978 683 aa19.98■□□□□ 0.79
DDR1-245ENST00000484556 RPP40O75818 363 aaKnown RBP19.98■□□□□ 0.79
DDR1-245ENST00000484556 PTPN2P17706 415 aa19.98■□□□□ 0.79
DDR1-245ENST00000484556 ARF4P18085 180 aaPredicted RBP19.98■□□□□ 0.79
DDR1-245ENST00000484556 GAB3Q8WWW8 586 aa19.98■□□□□ 0.79
DDR1-245ENST00000484556 EDEM2Q9BV94 578 aa19.98■□□□□ 0.79
DDR1-245ENST00000484556 MTRRQ9UBK8 725 aa19.98■□□□□ 0.79
DDR1-245ENST00000484556 SMG1Q96Q15 3661 aaKnown RBP19.98■□□□□ 0.79
DDR1-245ENST00000484556 C4orf47A7E2U8 309 aa19.97■□□□□ 0.79
DDR1-245ENST00000484556 B4GALT5O43286 388 aa19.97■□□□□ 0.79
DDR1-245ENST00000484556 TDP2O95551 362 aa19.97■□□□□ 0.79
DDR1-245ENST00000484556 LRG1P02750 347 aa19.97■□□□□ 0.79
DDR1-245ENST00000484556 RBM25P49756 843 aaKnown RBP19.97■□□□□ 0.79
DDR1-245ENST00000484556 EMC2Q15006 297 aa19.97■□□□□ 0.79
DDR1-245ENST00000484556 AMHR2Q16671 573 aa19.97■□□□□ 0.79
DDR1-245ENST00000484556 SH3PXD2AQ5TCZ1 1133 aa19.97■□□□□ 0.79
DDR1-245ENST00000484556 KIAA1211LQ6NV74 962 aa19.97■□□□□ 0.79
DDR1-245ENST00000484556 PDXDC1Q6P996 788 aa19.97■□□□□ 0.79
DDR1-245ENST00000484556 TXNDC11Q6PKC3 985 aa19.97■□□□□ 0.79
DDR1-245ENST00000484556 CACNA2D4Q7Z3S7 1137 aa19.97■□□□□ 0.79
DDR1-245ENST00000484556 WRAP73Q9P2S5 460 aaPredicted RBP19.97■□□□□ 0.79
DDR1-245ENST00000484556 LOC400499M0QZD8 3231 aa19.97■□□□□ 0.79
DDR1-245ENST00000484556 ARNTLO00327 626 aa19.96■□□□□ 0.79
DDR1-245ENST00000484556 CCDC192P0DO97 292 aa19.96■□□□□ 0.79
DDR1-245ENST00000484556 IGFBP6P24592 240 aaPredicted RBP19.96■□□□□ 0.79
DDR1-245ENST00000484556 GNA11P29992 359 aa19.96■□□□□ 0.79
DDR1-245ENST00000484556 PTENP60484 403 aa19.96■□□□□ 0.79
DDR1-245ENST00000484556 MBTD1Q05BQ5 628 aa19.96■□□□□ 0.79
DDR1-245ENST00000484556 NCBP1Q09161 790 aaKnown RBP19.96■□□□□ 0.79
DDR1-245ENST00000484556 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.96■□□□□ 0.79
DDR1-245ENST00000484556 CSGALNACT1Q8TDX6 532 aa19.96■□□□□ 0.79
DDR1-245ENST00000484556 CCDC12Q8WUD4 166 aaPredicted RBP19.96■□□□□ 0.79
DDR1-245ENST00000484556 DEPDC1BQ8WUY9 529 aa19.96■□□□□ 0.79
DDR1-245ENST00000484556 SMARCD2Q92925 531 aa19.96■□□□□ 0.79
DDR1-245ENST00000484556 CXCL16Q9H2A7 254 aa19.96■□□□□ 0.79
DDR1-245ENST00000484556 VPS45Q9NRW7 570 aa19.96■□□□□ 0.79
DDR1-245ENST00000484556 KLF18A0A0U1RQI7 1052 aa19.95■□□□□ 0.78
DDR1-245ENST00000484556 EML1O00423 815 aa19.95■□□□□ 0.78
DDR1-245ENST00000484556 EXTL3O43909 919 aa19.95■□□□□ 0.78
DDR1-245ENST00000484556 GJA1P17302 382 aa19.95■□□□□ 0.78
DDR1-245ENST00000484556 ADD1P35611 737 aaKnown RBP19.95■□□□□ 0.78
DDR1-245ENST00000484556 RFC5P40937 340 aa19.95■□□□□ 0.78
DDR1-245ENST00000484556 KPNA1P52294 538 aaPredicted RBP19.95■□□□□ 0.78
DDR1-245ENST00000484556 CREB3L3Q68CJ9 461 aa19.95■□□□□ 0.78
DDR1-245ENST00000484556 PDZD4Q76G19 769 aaPredicted RBP19.95■□□□□ 0.78
DDR1-245ENST00000484556 TTC8Q8TAM2 541 aa19.95■□□□□ 0.78
DDR1-245ENST00000484556 TCP11Q8WWU5 503 aa19.95■□□□□ 0.78
DDR1-245ENST00000484556 NAP1L2Q9ULW6 460 aaPredicted RBP19.95■□□□□ 0.78
DDR1-245ENST00000484556 ZMYM2Q9UBW7 1377 aa19.95■□□□□ 0.78
DDR1-245ENST00000484556 KIF26AQ9ULI4 1882 aaPredicted RBP19.94■□□□□ 0.78
DDR1-245ENST00000484556 ADAMTS20P59510 1910 aa19.94■□□□□ 0.78
DDR1-245ENST00000484556 PTGESO14684 152 aa19.94■□□□□ 0.78
DDR1-245ENST00000484556 FGFR3P22607 806 aa19.94■□□□□ 0.78
DDR1-245ENST00000484556 HOXA6P31267 233 aa19.94■□□□□ 0.78
DDR1-245ENST00000484556 QARSP47897 775 aaKnown RBP19.94■□□□□ 0.78
DDR1-245ENST00000484556 USP11P51784 963 aa19.94■□□□□ 0.78
DDR1-245ENST00000484556 ELAVL2Q12926 359 aaKnown RBP19.94■□□□□ 0.78
DDR1-245ENST00000484556 Q4G0T1 1027 aa19.94■□□□□ 0.78
DDR1-245ENST00000484556 SLC27A1Q6PCB7 646 aa19.94■□□□□ 0.78
DDR1-245ENST00000484556 RTL10Q7L3V2 364 aa19.94■□□□□ 0.78
DDR1-245ENST00000484556 HS6ST3Q8IZP7 471 aa19.94■□□□□ 0.78
DDR1-245ENST00000484556 PCDHGA5Q9Y5G8 931 aa19.94■□□□□ 0.78
DDR1-245ENST00000484556 LAMA5O15230 3695 aa19.94■□□□□ 0.78
DDR1-245ENST00000484556 ARHGEF37A1IGU5 675 aa19.93■□□□□ 0.78
DDR1-245ENST00000484556 HEPACAM2A8MVW5 462 aa19.93■□□□□ 0.78
DDR1-245ENST00000484556 PRRG1O14668 218 aa19.93■□□□□ 0.78
DDR1-245ENST00000484556 ASAP2O43150 1006 aa19.93■□□□□ 0.78
DDR1-245ENST00000484556 TKTP29401 623 aaKnown RBP19.93■□□□□ 0.78
DDR1-245ENST00000484556 SPIRE1Q08AE8 756 aa19.93■□□□□ 0.78
DDR1-245ENST00000484556 PCBP1Q15365 356 aaKnown RBP eCLIP19.93■□□□□ 0.78
DDR1-245ENST00000484556 DGKKQ5KSL6 1271 aa19.93■□□□□ 0.78
DDR1-245ENST00000484556 PKN3Q6P5Z2 889 aa19.93■□□□□ 0.78
DDR1-245ENST00000484556 MFSD6LQ8IWD5 586 aa19.93■□□□□ 0.78
DDR1-245ENST00000484556 EXOC8Q8IYI6 725 aa19.93■□□□□ 0.78
DDR1-245ENST00000484556 ZSCAN18Q8TBC5 510 aaPredicted RBP19.93■□□□□ 0.78
DDR1-245ENST00000484556 ETNPPLQ8TBG4 499 aa19.93■□□□□ 0.78
DDR1-245ENST00000484556 TBCKQ8TEA7 893 aa19.93■□□□□ 0.78
DDR1-245ENST00000484556 RSPRY1Q96DX4 576 aa19.93■□□□□ 0.78
DDR1-245ENST00000484556 DDX27Q96GQ7 796 aaKnown RBP19.93■□□□□ 0.78
DDR1-245ENST00000484556 LSG1Q9H089 658 aaKnown RBP19.93■□□□□ 0.78
DDR1-245ENST00000484556 SPECC1L-ADORA2AF8WAN1 911 aa19.92■□□□□ 0.78
DDR1-245ENST00000484556 I3L4J1 428 aa19.92■□□□□ 0.78
DDR1-245ENST00000484556 ZNF197O14709 1029 aa19.92■□□□□ 0.78
DDR1-245ENST00000484556 MOSPD3O75425 235 aa19.92■□□□□ 0.78
DDR1-245ENST00000484556 ROR1Q01973 937 aa19.92■□□□□ 0.78
DDR1-245ENST00000484556 CAPSQ13938 189 aa19.92■□□□□ 0.78
DDR1-245ENST00000484556 PON2Q15165 354 aa19.92■□□□□ 0.78
DDR1-245ENST00000484556 NAB2Q15742 525 aa19.92■□□□□ 0.78
DDR1-245ENST00000484556 SOWAHCQ53LP3 525 aaPredicted RBP19.92■□□□□ 0.78
DDR1-245ENST00000484556 DAB2IPQ5VWQ8 1189 aa19.92■□□□□ 0.78
DDR1-245ENST00000484556 BICD2Q8TD16 824 aa19.92■□□□□ 0.78
DDR1-245ENST00000484556 ASAP3Q8TDY4 903 aa19.92■□□□□ 0.78
DDR1-245ENST00000484556 MSANTD3Q96H12 275 aa19.92■□□□□ 0.78
DDR1-245ENST00000484556 MTRQ99707 1265 aa19.92■□□□□ 0.78
DDR1-245ENST00000484556 XPNPEP1Q9NQW7 623 aa19.92■□□□□ 0.78
DDR1-245ENST00000484556 FLNBO75369 2602 aaKnown RBP19.91■□□□□ 0.78
DDR1-245ENST00000484556 ELF1P32519 619 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms