RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 DHX58Q96C10 678 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 DNAJC19Q96DA6 116 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 RPGRIP1Q96KN7 1286 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 FBXL18Q96ME1 805 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 CHST7Q9NS84 486 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 STK39Q9UEW8 545 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 SCN1AP35498 2009 aa13.41□□□□□ -0.26
MSH5-216ENST00000484309 C19orf67A6NJJ6 358 aa13.41□□□□□ -0.26
MSH5-216ENST00000484309 ANKRD63C9JTQ0 380 aa13.41□□□□□ -0.26
MSH5-216ENST00000484309 B3GAT3O94766 335 aa13.41□□□□□ -0.26
MSH5-216ENST00000484309 ADH1AP07327 375 aa13.41□□□□□ -0.26
MSH5-216ENST00000484309 HOXB8P17481 243 aaPredicted RBP13.41□□□□□ -0.26
MSH5-216ENST00000484309 BRCC3P46736 316 aa13.41□□□□□ -0.26
MSH5-216ENST00000484309 SLC10A6Q3KNW5 377 aa13.41□□□□□ -0.26
MSH5-216ENST00000484309 XKR4Q5GH76 650 aa13.41□□□□□ -0.26
MSH5-216ENST00000484309 TMC5Q6UXY8 1006 aa13.41□□□□□ -0.26
MSH5-216ENST00000484309 PPFIBP1Q86W92 1011 aa13.41□□□□□ -0.26
MSH5-216ENST00000484309 POP1Q99575 1024 aaKnown RBP13.41□□□□□ -0.26
MSH5-216ENST00000484309 MRPL44Q9H9J2 332 aaKnown RBP13.41□□□□□ -0.26
MSH5-216ENST00000484309 MAN1C1Q9NR34 630 aa13.41□□□□□ -0.26
MSH5-216ENST00000484309 DZANK1Q9NVP4 752 aa13.41□□□□□ -0.26
MSH5-216ENST00000484309 SSX2IPQ9Y2D8 614 aa13.41□□□□□ -0.26
MSH5-216ENST00000484309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.4□□□□□ -0.26
MSH5-216ENST00000484309 FAM86C2PA6NEL3 165 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 PODXLO00592 558 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 GLUD1P00367 558 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 PIGRP01833 764 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 ME1P48163 572 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 GTF2BQ00403 316 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 E2F4Q16254 413 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 PSMD5Q16401 504 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 UPP1Q16831 310 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 AXDND1Q5T1B0 1012 aaPredicted RBP13.4□□□□□ -0.26
MSH5-216ENST00000484309 CES5AQ6NT32 575 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 CD300LGQ6UXG3 332 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 MAP4K3Q8IVH8 894 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 TTPALQ9BTX7 342 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 MSTO1Q9BUK6 570 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 PHF7Q9BWX1 381 aaPredicted RBP13.4□□□□□ -0.26
MSH5-216ENST00000484309 FGFBP2Q9BYJ0 223 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 ADAM7Q9H2U9 754 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 POMKQ9H5K3 350 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 RXFP1Q9HBX9 757 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 TSHZ2Q9NRE2 1034 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 CNTN3Q9P232 1028 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 TUBGCP4Q9UGJ1 667 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 PCDHA7Q9UN72 937 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 ZDHHC9Q9Y397 364 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 TSC2P49815 1807 aa13.4□□□□□ -0.26
MSH5-216ENST00000484309 DOCK8Q8NF50 2099 aa13.4□□□□□ -0.27
MSH5-216ENST00000484309 GCNT3O95395 438 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 CLTAP09496 248 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 PDIA4P13667 645 aaKnown RBP13.39□□□□□ -0.27
MSH5-216ENST00000484309 KCNE1P15382 129 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 GAP43P17677 238 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 TKTP29401 623 aaKnown RBP13.39□□□□□ -0.27
MSH5-216ENST00000484309 GUCY2FP51841 1108 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 CASP5P51878 434 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 KCNA1Q09470 495 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 HERC4Q5GLZ8 1057 aaPredicted RBP13.39□□□□□ -0.27
MSH5-216ENST00000484309 DCLRE1AQ6PJP8 1040 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 ZNF720Q7Z2F6 126 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 RNF135Q8IUD6 432 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 KCNG4Q8TDN1 519 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 KCNN1Q92952 543 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 HPS3Q969F9 1004 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 FAM212AQ96EL1 285 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 KIF12Q96FN5 646 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 UROC1Q96N76 676 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 SFXN1Q9H9B4 322 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 SLC38A7Q9NVC3 462 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 PANK4Q9NVE7 773 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 MUTYHQ9UIF7 546 aa13.39□□□□□ -0.27
MSH5-216ENST00000484309 A0A0B4J269 797 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 LACTBL1A8MY62 500 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 LOC730098B7Z3J9 87 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 TMEM189-UBE2V1I3L0A0 370 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 TULP1O00294 542 aaPredicted RBP13.38□□□□□ -0.27
MSH5-216ENST00000484309 OGTO15294 1046 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 ADAM12O43184 909 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 TGM5O43548 720 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 FAM189A1O60320 539 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 RFPL2O75678 378 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 PPP1R37O75864 691 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 CASP1P29466 404 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 ACOT2P49753 483 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 ITIH3Q06033 890 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 PPP2R3AQ06190 1150 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 ELAVL2Q12926 359 aaKnown RBP13.38□□□□□ -0.27
MSH5-216ENST00000484309 ENOX2Q16206 610 aaKnown RBP13.38□□□□□ -0.27
MSH5-216ENST00000484309 ADALQ6DHV7 355 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.38□□□□□ -0.27
MSH5-216ENST00000484309 LNX1Q8TBB1 728 aaPredicted RBP13.38□□□□□ -0.27
MSH5-216ENST00000484309 PIK3R5Q8WYR1 880 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 ST6GALNAC4Q9H4F1 302 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 RPF1Q9H9Y2 349 aaKnown RBP13.38□□□□□ -0.27
MSH5-216ENST00000484309 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.38□□□□□ -0.27
MSH5-216ENST00000484309 SEL1LQ9UBV2 794 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 CFAP45Q9UL16 551 aa13.38□□□□□ -0.27
MSH5-216ENST00000484309 TTC26A0AVF1 554 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms