RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 AGGF1Q8N302 714 aaeCLIP9.88□□□□□ -0.83
COL8A1-207ENST00000483969 MCPH1Q8NEM0 835 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 PRPF31Q8WWY3 499 aaKnown RBP9.88□□□□□ -0.83
COL8A1-207ENST00000483969 FOXD4L4Q8WXT5 416 aaPredicted RBP9.88□□□□□ -0.83
COL8A1-207ENST00000483969 TMEM143Q96AN5 459 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 USP28Q96RU2 1077 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 OSMRQ99650 979 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 CEP41Q9BYV8 373 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 AGO3Q9H9G7 860 aaKnown RBP9.88□□□□□ -0.83
COL8A1-207ENST00000483969 ATP6V0A4Q9HBG4 840 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 DDX19AQ9NUU7 478 aaKnown RBP9.88□□□□□ -0.83
COL8A1-207ENST00000483969 CFAP45Q9UL16 551 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 ST3GAL5Q9UNP4 418 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 RAXQ9Y2V3 346 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 NOC2LQ9Y3T9 749 aaKnown RBP9.88□□□□□ -0.83
COL8A1-207ENST00000483969 SRPRBQ9Y5M8 271 aaKnown RBP9.88□□□□□ -0.83
COL8A1-207ENST00000483969 MORC2Q9Y6X9 1032 aaPredicted RBP9.88□□□□□ -0.83
COL8A1-207ENST00000483969 TNRC18O15417 2968 aaPredicted RBP9.88□□□□□ -0.83
COL8A1-207ENST00000483969 A0A087WZ62 844 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 PP2D1A8MPX8 630 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 EYA4O95677 639 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 SRGAP2CP0DJJ0 459 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 DARSP14868 501 aaKnown RBP9.87□□□□□ -0.83
COL8A1-207ENST00000483969 ZSCAN20P17040 1043 aaPredicted RBP9.87□□□□□ -0.83
COL8A1-207ENST00000483969 CYP11B2P19099 503 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 MARCKSP29966 332 aaPredicted RBP9.87□□□□□ -0.83
COL8A1-207ENST00000483969 ARL2P36404 184 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 FXR1P51114 621 aaKnown RBP eCLIP9.87□□□□□ -0.83
COL8A1-207ENST00000483969 ATP11AP98196 1134 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 POU5F1BQ06416 359 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 NCBP1Q09161 790 aaKnown RBP9.87□□□□□ -0.83
COL8A1-207ENST00000483969 LAMTOR4Q0VGL1 99 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 DRP2Q13474 957 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 ECM1Q16610 540 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 UVSSAQ2YD98 709 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 HYIQ5T013 277 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 CEP135Q66GS9 1140 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 FAM109BQ6ICB4 259 aaPredicted RBP9.87□□□□□ -0.83
COL8A1-207ENST00000483969 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.87□□□□□ -0.83
COL8A1-207ENST00000483969 SRGAP1Q7Z6B7 1085 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 HERC6Q8IVU3 1022 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 RASSF8Q8NHQ8 419 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 PPP1R16BQ96T49 567 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 FDXACB1Q9BRP7 624 aaPredicted RBP9.87□□□□□ -0.83
COL8A1-207ENST00000483969 OSBPL7Q9BZF2 842 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 ERVK-5Q9HDB9 667 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 CCDC39Q9UFE4 941 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 KCNG1Q9UIX4 513 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 PCDHA11Q9Y5I1 949 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 ATP6V1DQ9Y5K8 247 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 COL4A3BPQ9Y5P4 624 aa9.87□□□□□ -0.83
COL8A1-207ENST00000483969 TMEM265A0A087WTH1 108 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 DENND3A2RUS2 1198 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 GRXCR1A8MXD5 290 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 E9PMD0 336 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 SOX1O00570 391 aaPredicted RBP9.86□□□□□ -0.83
COL8A1-207ENST00000483969 SPTLC2O15270 562 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 USO1O60763 962 aaKnown RBP9.86□□□□□ -0.83
COL8A1-207ENST00000483969 PPP6R2O75170 966 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 KIF4AO95239 1232 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 YEATS4O95619 227 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 BRD1O95696 1058 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 STAG3L1P0CL83 205 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 SFPQP23246 707 aaKnown RBP eCLIP9.86□□□□□ -0.83
COL8A1-207ENST00000483969 CD68P34810 354 aaPredicted RBP9.86□□□□□ -0.83
COL8A1-207ENST00000483969 SCNN1AP37088 669 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 NASPP49321 788 aaPredicted RBP9.86□□□□□ -0.83
COL8A1-207ENST00000483969 NUCB2P80303 420 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 PCBP1Q15365 356 aaKnown RBP eCLIP9.86□□□□□ -0.83
COL8A1-207ENST00000483969 TCTN1Q2MV58 587 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 FAM102BQ5T8I3 360 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 MAEAQ7L5Y9 396 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 MYOCDQ8IZQ8 938 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 LINC00301Q8NCQ3 95 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 TOP1MTQ969P6 601 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 TIFAQ96CG3 184 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 ZNF668Q96K58 619 aaPredicted RBP9.86□□□□□ -0.83
COL8A1-207ENST00000483969 NLRP4Q96MN2 994 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 RAD9AQ99638 391 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 MMTAG2Q9BU76 263 aaKnown RBP9.86□□□□□ -0.83
COL8A1-207ENST00000483969 PBX4Q9BYU1 374 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 CCSER1Q9C0I3 900 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 CSRNP2Q9H175 543 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 BHMT2Q9H2M3 363 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 SLC28A3Q9HAS3 691 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 CHST12Q9NRB3 414 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 C1orf112Q9NSG2 853 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 ABI2Q9NYB9 513 aaPredicted RBP9.86□□□□□ -0.83
COL8A1-207ENST00000483969 STIM2Q9P246 746 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 FBXO2Q9UK22 296 aaPredicted RBP9.86□□□□□ -0.83
COL8A1-207ENST00000483969 INSL6Q9Y581 213 aa9.86□□□□□ -0.83
COL8A1-207ENST00000483969 MKI67P46013 3256 aaKnown RBP9.86□□□□□ -0.83
COL8A1-207ENST00000483969 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.85□□□□□ -0.83
COL8A1-207ENST00000483969 LINC01387J3KSC0 135 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 GJB5O95377 273 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 DDIT3P35638 169 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 CD97P48960 835 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 DEFB103AP81534 67 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 GRB10Q13322 594 aa9.85□□□□□ -0.83
COL8A1-207ENST00000483969 PPP2R5AQ15172 486 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms