RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 KRT34O76011 436 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 PSMA2P25787 234 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 PTDSS1P48651 473 aaKnown RBP10.77□□□□□ -0.69
COL12A1-207ENST00000483888 TAB1Q15750 504 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 SETD3Q86TU7 594 aaPredicted RBP10.77□□□□□ -0.69
COL12A1-207ENST00000483888 SLC25A41Q8N5S1 370 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 FAM162AQ96A26 154 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 RNPEPL1Q9HAU8 725 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 IL1RL2Q9HB29 575 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 MAST3O60307 1309 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 COL17A1Q9UMD9 1497 aaPredicted RBP10.76□□□□□ -0.69
COL12A1-207ENST00000483888 CENPXA8MT69 81 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 ZBED4O75132 1171 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 PTK2BQ14289 1009 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 IFNEQ86WN2 208 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 RNF135Q8IUD6 432 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 UNC5CLQ8IV45 518 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 REXO1L1PQ8IX06 675 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 SERPINB12Q96P63 405 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 CYP26B1Q9NR63 512 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 JAG2Q9Y219 1238 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 PCDHB6Q9Y5E3 794 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 GNPATO15228 680 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 TBC1D12O60347 775 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 RTN3O95197 1032 aaPredicted RBP10.76□□□□□ -0.69
COL12A1-207ENST00000483888 ABATP80404 500 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 FASTKD1Q53R41 847 aaKnown RBP10.76□□□□□ -0.69
COL12A1-207ENST00000483888 C6orf183Q5T699 404 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 JADE3Q92613 823 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 OSBPL10Q9BXB5 764 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 VWA5AO00534 786 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 CCNCP24863 283 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 NR5A1Q13285 461 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 EFHC1Q5JVL4 640 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 GALNT6Q8NCL4 622 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 ANKRD36BP1Q96IX9 119 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 MAGED4Q96JG8 741 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 TEX13AQ9BXU3 409 aaPredicted RBP10.76□□□□□ -0.69
COL12A1-207ENST00000483888 ARHGEF38Q9NXL2 777 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 CCDC162PA2VCL2 907 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 C11orf88Q6PI97 169 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 LRRC6Q86X45 466 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 ZNF564Q8TBZ8 553 aaPredicted RBP10.76□□□□□ -0.69
COL12A1-207ENST00000483888 CASKIN2Q8WXE0 1202 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 ATXN7L3BQ96GX2 97 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 EPB41L4AQ9HCS5 686 aaPredicted RBP10.76□□□□□ -0.69
COL12A1-207ENST00000483888 SERPINB13Q9UIV8 391 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 ANKRD12Q6UB98 2062 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 PRR23AA6NEV1 266 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 EPHB2P29323 1055 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 IST1P53990 364 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 DPF2Q92785 391 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 SHCBP1LQ9BZQ2 653 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 SPDYE5A6NIY4 337 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 ZBTB39O15060 712 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 FGAP02671 866 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 ATP6V1C1P21283 382 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 OVGP1Q12889 678 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 STX12Q86Y82 276 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 FBXO28Q9NVF7 368 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 DNAAF2Q9NVR5 837 aaKnown RBP10.76□□□□□ -0.69
COL12A1-207ENST00000483888 MYCLP12524 364 aaPredicted RBP10.76□□□□□ -0.69
COL12A1-207ENST00000483888 NFKBIAP25963 317 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 ARL4AP40617 200 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 MAPK10P53779 464 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 TSC22D1Q15714 1073 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 ODR4Q5SWX8 454 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 LLGL2Q6P1M3 1020 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 GCNAQ96QF7 691 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 HESX1Q9UBX0 185 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 NESP48681 1621 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 RASA2Q15283 850 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 CHI3L2Q15782 390 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 TTC13Q8NBP0 860 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 SLC52A1Q9NWF4 448 aa10.76□□□□□ -0.69
COL12A1-207ENST00000483888 FAM47AQ5JRC9 791 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 PPP4R3CPQ6ZMV5 832 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 YTHDF3Q7Z739 585 aaKnown RBP10.75□□□□□ -0.69
COL12A1-207ENST00000483888 COX4I2Q96KJ9 171 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 WBP11Q9Y2W2 641 aaKnown RBP10.75□□□□□ -0.69
COL12A1-207ENST00000483888 SYNJ2O15056 1496 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 ABCC2Q92887 1545 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 HSMCR30P0CW71 290 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 ZNF23P17027 643 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 CASP1P29466 404 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 CDC25AP30304 524 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 MXI1P50539 228 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 RAD23AP54725 363 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 CSE1LP55060 971 aaKnown RBP10.75□□□□□ -0.69
COL12A1-207ENST00000483888 KRT26Q7Z3Y9 468 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 PRDM11Q9NQV5 511 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 TMEM161AQ9NX61 479 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 CFAP43Q8NDM7 1665 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 RSPH1Q8WYR4 309 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 BTBD10Q9BSF8 475 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 ZNF263O14978 683 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 TPST1O60507 370 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 ZNF284Q2VY69 593 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 PRR23CQ6ZRP0 262 aa10.75□□□□□ -0.69
COL12A1-207ENST00000483888 TMC4Q7Z404 712 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms