RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 DHX38Q92620 1227 aaKnown RBP28.25■■■□□ 2.11
SHOX2-204ENST00000483851 ADPGKQ9BRR6 497 aa28.25■■■□□ 2.11
SHOX2-204ENST00000483851 FAM53CQ9NYF3 392 aa28.25■■■□□ 2.11
SHOX2-204ENST00000483851 CDC23Q9UJX2 597 aa28.25■■■□□ 2.11
SHOX2-204ENST00000483851 DUSP10Q9Y6W6 482 aa28.25■■■□□ 2.11
SHOX2-204ENST00000483851 GPR25O00155 361 aa28.24■■■□□ 2.11
SHOX2-204ENST00000483851 TNFAIP3P21580 790 aa28.24■■■□□ 2.11
SHOX2-204ENST00000483851 TBXAS1P24557 533 aaPredicted RBP28.24■■■□□ 2.11
SHOX2-204ENST00000483851 IRX5P78411 483 aaPredicted RBP28.24■■■□□ 2.11
SHOX2-204ENST00000483851 GNASQ5JWF2 1037 aa28.24■■■□□ 2.11
SHOX2-204ENST00000483851 C7orf31Q8N865 590 aa28.24■■■□□ 2.11
SHOX2-204ENST00000483851 OR5B17Q8NGF7 314 aa28.24■■■□□ 2.11
SHOX2-204ENST00000483851 OLIG1Q8TAK6 271 aa28.24■■■□□ 2.11
SHOX2-204ENST00000483851 KAT5Q92993 513 aa28.24■■■□□ 2.11
SHOX2-204ENST00000483851 ALS2CR12Q96Q35 445 aa28.24■■■□□ 2.11
SHOX2-204ENST00000483851 AGPAT1Q99943 283 aa28.24■■■□□ 2.11
SHOX2-204ENST00000483851 IMPG2Q9BZV3 1241 aa28.24■■■□□ 2.11
SHOX2-204ENST00000483851 OGFRQ9NZT2 677 aa28.24■■■□□ 2.11
SHOX2-204ENST00000483851 MACROD2A1Z1Q3 448 aa28.23■■■□□ 2.11
SHOX2-204ENST00000483851 PHACTR2O75167 634 aa28.23■■■□□ 2.11
SHOX2-204ENST00000483851 CACNB2Q08289 660 aaPredicted RBP28.23■■■□□ 2.11
SHOX2-204ENST00000483851 TATDN2Q93075 761 aa28.23■■■□□ 2.11
SHOX2-204ENST00000483851 NOX5Q96PH1 765 aa28.23■■■□□ 2.11
SHOX2-204ENST00000483851 FAM49AQ9H0Q0 323 aaPredicted RBP28.23■■■□□ 2.11
SHOX2-204ENST00000483851 ASB7Q9H672 318 aa28.23■■■□□ 2.11
SHOX2-204ENST00000483851 ZNF446Q9NWS9 450 aa28.23■■■□□ 2.11
SHOX2-204ENST00000483851 SRRDQ9UH36 339 aa28.23■■■□□ 2.11
SHOX2-204ENST00000483851 CHMP4BP1P59074 171 aa28.23■■■□□ 2.11
SHOX2-204ENST00000483851 NCOA4Q13772 614 aa28.23■■■□□ 2.11
SHOX2-204ENST00000483851 KIZQ2M2Z5 673 aa28.23■■■□□ 2.11
SHOX2-204ENST00000483851 DCAF4L1Q3SXM0 396 aa28.23■■■□□ 2.11
SHOX2-204ENST00000483851 TAF2Q6P1X5 1199 aa28.23■■■□□ 2.11
SHOX2-204ENST00000483851 LNX1Q8TBB1 728 aaPredicted RBP28.23■■■□□ 2.11
SHOX2-204ENST00000483851 ANK1P16157 1881 aa28.22■■■□□ 2.11
SHOX2-204ENST00000483851 H2AFZP0C0S5 128 aa28.22■■■□□ 2.11
SHOX2-204ENST00000483851 AXLP30530 894 aa28.22■■■□□ 2.11
SHOX2-204ENST00000483851 H2AFVQ71UI9 128 aa28.22■■■□□ 2.11
SHOX2-204ENST00000483851 TRAPPC11Q7Z392 1133 aa28.22■■■□□ 2.11
SHOX2-204ENST00000483851 PPP1R16BQ96T49 567 aa28.22■■■□□ 2.11
SHOX2-204ENST00000483851 RNF186Q9NXI6 227 aa28.22■■■□□ 2.11
SHOX2-204ENST00000483851 HDAC6Q9UBN7 1215 aa28.22■■■□□ 2.11
SHOX2-204ENST00000483851 SCN10AQ9Y5Y9 1956 aa28.22■■■□□ 2.11
SHOX2-204ENST00000483851 RPLP2P05387 115 aaKnown RBP28.21■■■□□ 2.11
SHOX2-204ENST00000483851 STAG3L1P0CL83 205 aa28.21■■■□□ 2.11
SHOX2-204ENST00000483851 DARSP14868 501 aaKnown RBP28.21■■■□□ 2.11
SHOX2-204ENST00000483851 GLYCTKQ8IVS8 523 aa28.21■■■□□ 2.11
SHOX2-204ENST00000483851 ANKRD36BP1Q96IX9 119 aa28.21■■■□□ 2.11
SHOX2-204ENST00000483851 PI4K2AQ9BTU6 479 aa28.21■■■□□ 2.11
SHOX2-204ENST00000483851 JRKLQ9Y4A0 524 aa28.21■■■□□ 2.11
SHOX2-204ENST00000483851 A0A0A6YYK5 440 aaPredicted RBP28.21■■■□□ 2.11
SHOX2-204ENST00000483851 TREHO43280 583 aa28.21■■■□□ 2.11
SHOX2-204ENST00000483851 TNNC2P02585 160 aa28.21■■■□□ 2.11
SHOX2-204ENST00000483851 BPIFB4P59827 614 aa28.21■■■□□ 2.11
SHOX2-204ENST00000483851 HIC1Q14526 733 aa28.21■■■□□ 2.11
SHOX2-204ENST00000483851 IFI16Q16666 785 aaKnown RBP28.21■■■□□ 2.11
SHOX2-204ENST00000483851 RUFY4Q6ZNE9 571 aa28.21■■■□□ 2.11
SHOX2-204ENST00000483851 CD302Q8IX05 232 aa28.21■■■□□ 2.11
SHOX2-204ENST00000483851 EPS8L1Q8TE68 723 aa28.21■■■□□ 2.11
SHOX2-204ENST00000483851 FAXDC2Q96IV6 333 aa28.21■■■□□ 2.11
SHOX2-204ENST00000483851 CSDE1O75534 798 aaKnown RBP28.2■■■□□ 2.1
SHOX2-204ENST00000483851 ASS1P00966 412 aaKnown RBP28.2■■■□□ 2.1
SHOX2-204ENST00000483851 TMEM191BP0C7N4 346 aa28.2■■■□□ 2.1
SHOX2-204ENST00000483851 EIF4BP23588 611 aaKnown RBP28.2■■■□□ 2.1
SHOX2-204ENST00000483851 USP8P40818 1118 aa28.2■■■□□ 2.1
SHOX2-204ENST00000483851 CLCN6P51797 869 aa28.2■■■□□ 2.1
SHOX2-204ENST00000483851 SGSM1Q2NKQ1 1148 aa28.2■■■□□ 2.1
SHOX2-204ENST00000483851 PAPD7Q5XG87 772 aaKnown RBP28.2■■■□□ 2.1
SHOX2-204ENST00000483851 NT5DC4Q86YG4 428 aa28.2■■■□□ 2.1
SHOX2-204ENST00000483851 GPR161Q8N6U8 529 aaKnown RBP28.2■■■□□ 2.1
SHOX2-204ENST00000483851 CEP120Q8N960 986 aa28.2■■■□□ 2.1
SHOX2-204ENST00000483851 U2AF1L4Q8WU68 220 aaKnown RBP28.2■■■□□ 2.1
SHOX2-204ENST00000483851 DNAJB3Q8WWF6 145 aa28.2■■■□□ 2.1
SHOX2-204ENST00000483851 CPB2Q96IY4 423 aa28.2■■■□□ 2.1
SHOX2-204ENST00000483851 NOCTQ9UK39 431 aaKnown RBP28.2■■■□□ 2.1
SHOX2-204ENST00000483851 MYADML2A6NDP7 307 aa28.19■■■□□ 2.1
SHOX2-204ENST00000483851 ADAMTS4O75173 837 aa28.19■■■□□ 2.1
SHOX2-204ENST00000483851 CST5P28325 142 aaPredicted RBP28.19■■■□□ 2.1
SHOX2-204ENST00000483851 NOP14P78316 857 aaKnown RBP28.19■■■□□ 2.1
SHOX2-204ENST00000483851 AMPD2Q01433 879 aa28.19■■■□□ 2.1
SHOX2-204ENST00000483851 CUL2Q13617 745 aa28.19■■■□□ 2.1
SHOX2-204ENST00000483851 CDR2LQ86X02 465 aaPredicted RBP28.19■■■□□ 2.1
SHOX2-204ENST00000483851 RABGGTAQ92696 567 aa28.19■■■□□ 2.1
SHOX2-204ENST00000483851 TAF4BQ92750 862 aa28.19■■■□□ 2.1
SHOX2-204ENST00000483851 FAM212AQ96EL1 285 aa28.19■■■□□ 2.1
SHOX2-204ENST00000483851 SPDYE4A6NLX3 237 aa28.19■■■□□ 2.1
SHOX2-204ENST00000483851 TRPA1O75762 1119 aa28.19■■■□□ 2.1
SHOX2-204ENST00000483851 GZMAP12544 262 aa28.19■■■□□ 2.1
SHOX2-204ENST00000483851 CATSPER4Q7RTX7 472 aa28.19■■■□□ 2.1
SHOX2-204ENST00000483851 MTMR12Q9C0I1 747 aa28.19■■■□□ 2.1
SHOX2-204ENST00000483851 XPNPEP3Q9NQH7 507 aa28.19■■■□□ 2.1
SHOX2-204ENST00000483851 CNTN6Q9UQ52 1028 aa28.19■■■□□ 2.1
SHOX2-204ENST00000483851 CYP26A1O43174 497 aa28.18■■■□□ 2.1
SHOX2-204ENST00000483851 HMGCRP04035 888 aa28.18■■■□□ 2.1
SHOX2-204ENST00000483851 CXCL8P10145 99 aa28.18■■■□□ 2.1
SHOX2-204ENST00000483851 GRM5P41594 1212 aa28.18■■■□□ 2.1
SHOX2-204ENST00000483851 PDE6CP51160 858 aa28.18■■■□□ 2.1
SHOX2-204ENST00000483851 CRYBB1P53674 252 aaPredicted RBP28.18■■■□□ 2.1
SHOX2-204ENST00000483851 NOTUMQ6P988 496 aa28.18■■■□□ 2.1
SHOX2-204ENST00000483851 ZNF677Q86XU0 584 aa28.18■■■□□ 2.1
SHOX2-204ENST00000483851 PXYLP1Q8TE99 480 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms