RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 CXCL8P10145 99 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 KCNE1P15382 129 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 FGFR3P22607 806 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 TKTP29401 623 aaKnown RBP13.22□□□□□ -0.29
HDLBP-239ENST00000483086 DDIT3P35638 169 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 NASPP49321 788 aaPredicted RBP13.22□□□□□ -0.29
HDLBP-239ENST00000483086 ZXDAP98168 799 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 NOLC1Q14978 699 aaKnown RBP eCLIP13.22□□□□□ -0.299e-6■□□□□ 9.6
HDLBP-239ENST00000483086 SLC39A14Q15043 492 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 CES5AQ6NT32 575 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 ZPBP2Q6X784 338 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 PPFIBP1Q86W92 1011 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 CEP57Q86XR8 500 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 PIK3R5Q8WYR1 880 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 ASIC4Q96FT7 647 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 CHAMP1Q96JM3 812 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 PANK2Q9BZ23 570 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 SFXN1Q9H9B4 322 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 FNIP2Q9P278 1114 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 STK39Q9UEW8 545 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 TUBGCP4Q9UGJ1 667 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 TBX20Q9UMR3 447 aa13.22□□□□□ -0.29
HDLBP-239ENST00000483086 COL4A3Q01955 1670 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 CCDC195A0A1B0GUA6 201 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 K7ENM7 598 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 NR1I2O75469 434 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 B3GAT3O94766 335 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 GLUD1P00367 558 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 PDGFBP01127 241 aaPredicted RBP13.21□□□□□ -0.29
HDLBP-239ENST00000483086 PIGRP01833 764 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 MTHFRP42898 656 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 GUCY2FP51841 1108 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 KCNA1Q09470 495 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 BMS1Q14692 1282 aaKnown RBP13.21□□□□□ -0.29
HDLBP-239ENST00000483086 PSMD5Q16401 504 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 PTPN21Q16825 1174 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 DYMQ7RTS9 669 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 MYCT1Q8N699 235 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 LINC00301Q8NCQ3 95 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 ZSWIM2Q8NEG5 633 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 DDX27Q96GQ7 796 aaKnown RBP13.21□□□□□ -0.29
HDLBP-239ENST00000483086 ACAP3Q96P50 834 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 TCHPQ9BT92 498 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 TTPALQ9BTX7 342 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 CCDC94Q9BW85 323 aaPredicted RBP13.21□□□□□ -0.29
HDLBP-239ENST00000483086 STRA6Q9BX79 667 aa13.21□□□□□ -0.29
HDLBP-239ENST00000483086 TFIP11Q9UBB9 837 aaKnown RBP13.21□□□□□ -0.29
HDLBP-239ENST00000483086 MORC2Q9Y6X9 1032 aaPredicted RBP13.21□□□□□ -0.29
HDLBP-239ENST00000483086 TTC26A0AVF1 554 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 PODXLO00592 558 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 PPEF2O14830 753 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 TRAK2O60296 914 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 PPP1R37O75864 691 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 FAM13AO94988 1023 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 CASP5P51878 434 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 SMTNP53814 917 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 WNT7BP56706 349 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 GTF2BQ00403 316 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 STRN3Q13033 797 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 ZBTB6Q15916 424 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 ENOX2Q16206 610 aaKnown RBP13.2□□□□□ -0.3
HDLBP-239ENST00000483086 FOXD4L6Q3SYB3 417 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-239ENST00000483086 ATAT1Q5SQI0 421 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 SCARA3Q6AZY7 606 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 DCLRE1AQ6PJP8 1040 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 POTEHQ6S545 545 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 FOXD4L3Q6VB84 417 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-239ENST00000483086 TRIM67Q6ZTA4 783 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 SFR1Q86XK3 245 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 GPR65Q8IYL9 337 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 TMEM87AQ8NBN3 555 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 SPRYD3Q8NCJ5 442 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 ST13P5Q8NFI4 369 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-239ENST00000483086 CMASQ8NFW8 434 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-239ENST00000483086 RIPOR3Q96MK2 946 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 NECTIN4Q96NY8 510 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 PARVGQ9HBI0 331 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 LARSQ9P2J5 1176 aaKnown RBP13.2□□□□□ -0.3
HDLBP-239ENST00000483086 MTRRQ9UBK8 725 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 FBXW11Q9UKB1 542 aa13.2□□□□□ -0.3
HDLBP-239ENST00000483086 A0A0B4J269 797 aa13.19□□□□□ -0.3
HDLBP-239ENST00000483086 NRG2O14511 850 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-239ENST00000483086 CLDN3O15551 220 aa13.19□□□□□ -0.3
HDLBP-239ENST00000483086 TBC1D4O60343 1298 aa13.19□□□□□ -0.3
HDLBP-239ENST00000483086 NTHL1P78549 312 aa13.19□□□□□ -0.3
HDLBP-239ENST00000483086 E2F4Q16254 413 aa13.19□□□□□ -0.3
HDLBP-239ENST00000483086 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-239ENST00000483086 C15orf39Q6ZRI6 1047 aa13.19□□□□□ -0.3
HDLBP-239ENST00000483086 MAP4K3Q8IVH8 894 aa13.19□□□□□ -0.3
HDLBP-239ENST00000483086 KREMEN2Q8NCW0 462 aa13.19□□□□□ -0.3
HDLBP-239ENST00000483086 GLIS3Q8NEA6 775 aa13.19□□□□□ -0.3
HDLBP-239ENST00000483086 DDX12PQ92771 950 aa13.19□□□□□ -0.3
HDLBP-239ENST00000483086 STAMQ92783 540 aa13.19□□□□□ -0.3
HDLBP-239ENST00000483086 MYADMQ96S97 322 aa13.19□□□□□ -0.3
HDLBP-239ENST00000483086 ZHX3Q9H4I2 956 aa13.19□□□□□ -0.3
HDLBP-239ENST00000483086 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.19□□□□□ -0.3
HDLBP-239ENST00000483086 LIMD1Q9UGP4 676 aa13.19□□□□□ -0.3
HDLBP-239ENST00000483086 SSX2IPQ9Y2D8 614 aa13.19□□□□□ -0.3
HDLBP-239ENST00000483086 TMEM221A6NGB7 291 aa13.18□□□□□ -0.3
HDLBP-239ENST00000483086 LACTBL1A8MY62 500 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms