RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 NOTCH4Q99466 2003 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 SPTBN2O15020 2390 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 A0A087WWV3 80 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 MED19A0JLT2 244 aaPredicted RBP11.4□□□□□ -0.58
DDX39B-220ENST00000482195 POTEMA6NI47 508 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 SLITRK3O94933 977 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 ARL2P36404 184 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 TXKP42681 527 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 RARRES1P49788 294 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 GPC5P78333 572 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 NR5A1Q13285 461 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 TUSC3Q13454 348 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 MLF2Q15773 248 aaPredicted RBP11.4□□□□□ -0.58
DDX39B-220ENST00000482195 POTEGQ6S5H5 508 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 DCLK2Q8N568 766 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 GSTCDQ8NEC7 633 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 SLC7A14Q8TBB6 771 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 ING5Q8WYH8 240 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 WASF1Q92558 559 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 RPP25Q9BUL9 199 aaKnown RBP11.4□□□□□ -0.58
DDX39B-220ENST00000482195 BCO2Q9BYV7 579 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 GPRC5CQ9NQ84 441 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 ANKEF1Q9NU02 776 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 PRMT7Q9NVM4 692 aaPredicted RBP11.4□□□□□ -0.58
DDX39B-220ENST00000482195 SNTG2Q9NY99 539 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 NCDNQ9UBB6 729 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 ORC3Q9UBD5 711 aaPredicted RBP11.4□□□□□ -0.58
DDX39B-220ENST00000482195 PCDHA12Q9UN75 941 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 ZFP37Q9Y6Q3 630 aaPredicted RBP11.4□□□□□ -0.58
DDX39B-220ENST00000482195 GPR179Q6PRD1 2367 aa11.4□□□□□ -0.58
DDX39B-220ENST00000482195 NCOR2Q9Y618 2525 aa11.4□□□□□ -0.59
DDX39B-220ENST00000482195 CITO14578 2027 aa11.4□□□□□ -0.59
DDX39B-220ENST00000482195 KANSL1LA0AUZ9 987 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 N4BP3O15049 544 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 LAMTOR5O43504 91 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 NEMFO60524 1076 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 RECQL4O94761 1208 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 C1RP00736 705 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 THP07101 528 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 HNRNPA1P09651 372 aaKnown RBP eCLIP11.39□□□□□ -0.593e-6■□□□□ 11
DDX39B-220ENST00000482195 GLULP15104 373 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 NDUFV2P19404 249 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 POU5F1BQ06416 359 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 LILRA6Q6PI73 481 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 GPR65Q8IYL9 337 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 ITFG1Q8TB96 612 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 PIK3R5Q8WYR1 880 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 RUBCNQ92622 972 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 FGF13Q92913 245 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 ADPGKQ9BRR6 497 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 NFKBIZQ9BYH8 718 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 TM6SF1Q9BZW5 370 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 TTC12Q9H892 705 aaPredicted RBP11.39□□□□□ -0.59
DDX39B-220ENST00000482195 DLGAP2Q9P1A6 1054 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 KIAA1468Q9P260 1216 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 GDAQ9Y2T3 454 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 TICRRQ7Z2Z1 1910 aa11.39□□□□□ -0.59
DDX39B-220ENST00000482195 CACNA1BQ00975 2339 aa11.38□□□□□ -0.59
DDX39B-220ENST00000482195 FRYLO94915 3013 aa11.38□□□□□ -0.59
DDX39B-220ENST00000482195 A0A1B0GUA9 196 aa11.38□□□□□ -0.59
DDX39B-220ENST00000482195 LYPLA2O95372 231 aa11.38□□□□□ -0.59
DDX39B-220ENST00000482195 PRKCBP05771 671 aa11.38□□□□□ -0.59
DDX39B-220ENST00000482195 ATP2B1P20020 1258 aa11.38□□□□□ -0.59
DDX39B-220ENST00000482195 STARD6P59095 220 aa11.38□□□□□ -0.59
DDX39B-220ENST00000482195 CSTF1Q05048 431 aaKnown RBP11.38□□□□□ -0.59
DDX39B-220ENST00000482195 ELAVL2Q12926 359 aaKnown RBP11.38□□□□□ -0.59
DDX39B-220ENST00000482195 PRPF4BQ13523 1007 aaKnown RBP11.38□□□□□ -0.59
DDX39B-220ENST00000482195 PUM1Q14671 1186 aaKnown RBP eCLIP11.38□□□□□ -0.597e-11■□□□□ 8.5
DDX39B-220ENST00000482195 PABPC1LQ4VXU2 614 aaKnown RBP11.38□□□□□ -0.59
DDX39B-220ENST00000482195 GLRA4Q5JXX5 417 aa11.38□□□□□ -0.59
DDX39B-220ENST00000482195 AXDND1Q5T1B0 1012 aaPredicted RBP11.38□□□□□ -0.59
DDX39B-220ENST00000482195 PDXDC1Q6P996 788 aa11.38□□□□□ -0.59
DDX39B-220ENST00000482195 NOSTRINQ8IVI9 506 aa11.38□□□□□ -0.59
DDX39B-220ENST00000482195 MCPH1Q8NEM0 835 aa11.38□□□□□ -0.59
DDX39B-220ENST00000482195 LNX1Q8TBB1 728 aaPredicted RBP11.38□□□□□ -0.59
DDX39B-220ENST00000482195 PRIMPOLQ96LW4 560 aa11.38□□□□□ -0.59
DDX39B-220ENST00000482195 CLSTN3Q9BQT9 956 aa11.38□□□□□ -0.59
DDX39B-220ENST00000482195 C2orf40Q9H1Z8 148 aa11.38□□□□□ -0.59
DDX39B-220ENST00000482195 PDZD7Q9H5P4 517 aa11.38□□□□□ -0.59
DDX39B-220ENST00000482195 HCFC1R1Q9NWW0 138 aa11.38□□□□□ -0.59
DDX39B-220ENST00000482195 TPCN1Q9ULQ1 816 aa11.38□□□□□ -0.59
DDX39B-220ENST00000482195 PDCD11Q14690 1871 aaKnown RBP11.38□□□□□ -0.59
DDX39B-220ENST00000482195 FAM170BA6NMN3 283 aa11.37□□□□□ -0.59
DDX39B-220ENST00000482195 PTGESO14684 152 aa11.37□□□□□ -0.59
DDX39B-220ENST00000482195 ADAM12O43184 909 aa11.37□□□□□ -0.59
DDX39B-220ENST00000482195 PFKFB2O60825 505 aa11.37□□□□□ -0.59
DDX39B-220ENST00000482195 PAPLNO95428 1278 aa11.37□□□□□ -0.59
DDX39B-220ENST00000482195 CD72P21854 359 aa11.37□□□□□ -0.59
DDX39B-220ENST00000482195 OR1D2P34982 312 aa11.37□□□□□ -0.59
DDX39B-220ENST00000482195 PFKPQ01813 784 aa11.37□□□□□ -0.59
DDX39B-220ENST00000482195 PRKCQQ04759 706 aa11.37□□□□□ -0.59
DDX39B-220ENST00000482195 TRIM29Q14134 588 aa11.37□□□□□ -0.59
DDX39B-220ENST00000482195 QPCTQ16769 361 aa11.37□□□□□ -0.59
DDX39B-220ENST00000482195 RSPO4Q2I0M5 234 aaPredicted RBP11.37□□□□□ -0.59
DDX39B-220ENST00000482195 SLC44A4Q53GD3 710 aa11.37□□□□□ -0.59
DDX39B-220ENST00000482195 CDCA2Q69YH5 1023 aaPredicted RBP11.37□□□□□ -0.59
DDX39B-220ENST00000482195 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.37□□□□□ -0.59
DDX39B-220ENST00000482195 TPRG1Q6ZUI0 275 aa11.37□□□□□ -0.59
DDX39B-220ENST00000482195 DEPTORQ8TB45 409 aa11.37□□□□□ -0.59
DDX39B-220ENST00000482195 ATRIPQ8WXE1 791 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms