RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 GPR25O00155 361 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 SEPT4O43236 478 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 B4GALT5O43286 388 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 TSPAN1O60635 241 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 RTN2O75298 545 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 LRRN2O75325 713 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 GPR32O75388 356 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 MOCS3O95396 460 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 IQCF3P0C7M6 154 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 PNMA6AP0CW24 399 aaPredicted RBP12.58□□□□□ -0.4
GGPS1-205ENST00000482013 HARSP12081 509 aaKnown RBP12.58□□□□□ -0.4
GGPS1-205ENST00000482013 TCP1P17987 556 aaKnown RBP12.58□□□□□ -0.4
GGPS1-205ENST00000482013 ARF4P18085 180 aaPredicted RBP12.58□□□□□ -0.4
GGPS1-205ENST00000482013 WNT7BP56706 349 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 NCOA4Q13772 614 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 PPP1R2P3Q6NXS1 205 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 GLYCTKQ8IVS8 523 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 THNSL1Q8IYQ7 743 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 TRPV1Q8NER1 839 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 OR5B17Q8NGF7 314 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 EPS8L1Q8TE68 723 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 TRIB2Q92519 343 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 ZBTB10Q96DT7 871 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 RPGRIP1Q96KN7 1286 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 TSPAN18Q96SJ8 248 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 MTG1Q9BT17 334 aaPredicted RBP12.58□□□□□ -0.4
GGPS1-205ENST00000482013 CARD6Q9BX69 1037 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 FAM124BQ9H5Z6 455 aaPredicted RBP12.58□□□□□ -0.4
GGPS1-205ENST00000482013 NOCTQ9UK39 431 aaKnown RBP12.58□□□□□ -0.4
GGPS1-205ENST00000482013 GABRQQ9UN88 632 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 PCDHB2Q9Y5E7 798 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 NCANO14594 1321 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 PTPRJQ12913 1337 aa12.58□□□□□ -0.4
GGPS1-205ENST00000482013 CYP26A1O43174 497 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 SGPL1O95470 568 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 ASS1P00966 412 aaKnown RBP12.57□□□□□ -0.4
GGPS1-205ENST00000482013 TMEM191BP0C7N4 346 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 STAG3L1P0CL83 205 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 CYP11B1P15538 503 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 MAP2K2P36507 400 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 USP8P40818 1118 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 GRM5P41594 1212 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 PDE6CP51160 858 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 GALCP54803 685 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 HADHBP55084 474 aaKnown RBP12.57□□□□□ -0.4
GGPS1-205ENST00000482013 NAP1L1P55209 391 aaKnown RBP12.57□□□□□ -0.4
GGPS1-205ENST00000482013 YWHAEP62258 255 aaKnown RBP12.57□□□□□ -0.4
GGPS1-205ENST00000482013 NOP14P78316 857 aaKnown RBP12.57□□□□□ -0.4
GGPS1-205ENST00000482013 CDR2Q01850 454 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 CKAP4Q07065 602 aaKnown RBP12.57□□□□□ -0.4
GGPS1-205ENST00000482013 CUL2Q13617 745 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 LMBRD2Q68DH5 695 aaPredicted RBP12.57□□□□□ -0.4
GGPS1-205ENST00000482013 TAF2Q6P1X5 1199 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 GPIHBP1Q8IV16 184 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 RPUSD2Q8IZ73 545 aaKnown RBP12.57□□□□□ -0.4
GGPS1-205ENST00000482013 SYCE1Q8N0S2 351 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 KAT5Q92993 513 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 ZNF668Q96K58 619 aaPredicted RBP12.57□□□□□ -0.4
GGPS1-205ENST00000482013 PLEKHA5Q9HAU0 1116 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 RNF14Q9UBS8 474 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 SALL4Q9UJQ4 1053 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 DERAQ9Y315 318 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 CAPN6Q9Y6Q1 641 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 SCN10AQ9Y5Y9 1956 aa12.57□□□□□ -0.4
GGPS1-205ENST00000482013 CITO14578 2027 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 TADA3O75528 432 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 ECM2O94769 699 aaPredicted RBP12.56□□□□□ -0.4
GGPS1-205ENST00000482013 TBC1D8O95759 1140 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 ATP1A1P05023 1023 aaKnown RBP12.56□□□□□ -0.4
GGPS1-205ENST00000482013 RARBP10826 455 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 DARSP14868 501 aaKnown RBP12.56□□□□□ -0.4
GGPS1-205ENST00000482013 CHRNB2P17787 502 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 CST5P28325 142 aaPredicted RBP12.56□□□□□ -0.4
GGPS1-205ENST00000482013 ATICP31939 592 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 APLP1P51693 650 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 CRYBB1P53674 252 aaPredicted RBP12.56□□□□□ -0.4
GGPS1-205ENST00000482013 BEX3Q00994 111 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 TRPC3Q13507 836 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 ARHGEF6Q15052 776 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 SEZ6Q53EL9 994 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 SLC27A1Q6PCB7 646 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 NOP9Q86U38 636 aaKnown RBP12.56□□□□□ -0.4
GGPS1-205ENST00000482013 RHOT2Q8IXI1 618 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 C7orf31Q8N865 590 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 CTNNBL1Q8WYA6 563 aaPredicted RBP12.56□□□□□ -0.4
GGPS1-205ENST00000482013 RFFLQ8WZ73 363 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 DDX1Q92499 740 aaKnown RBP12.56□□□□□ -0.4
GGPS1-205ENST00000482013 UBXN4Q92575 508 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 FAM212AQ96EL1 285 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 ACAP3Q96P50 834 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 PI4K2AQ9BTU6 479 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 CCDC94Q9BW85 323 aaPredicted RBP12.56□□□□□ -0.4
GGPS1-205ENST00000482013 PACSIN1Q9BY11 444 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 ARHGAP39Q9C0H5 1083 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 SNX12Q9UMY4 172 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 C2CD2Q9Y426 696 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 HYOU1Q9Y4L1 999 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 RALGAPA2Q2PPJ7 1873 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 MROH7Q68CQ1 1323 aa12.56□□□□□ -0.4
GGPS1-205ENST00000482013 TRIP12Q14669 1992 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms