RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 UROC1Q96N76 676 aa8.93□□□□□ -0.98
SYNE1-225ENST00000481502 MRPL9Q9BYD2 267 aaKnown RBP8.93□□□□□ -0.98
SYNE1-225ENST00000481502 TMEM117Q9H0C3 514 aa8.93□□□□□ -0.98
SYNE1-225ENST00000481502 NUCKS1Q9H1E3 243 aaKnown RBP8.93□□□□□ -0.98
SYNE1-225ENST00000481502 IKZF4Q9H2S9 585 aa8.93□□□□□ -0.98
SYNE1-225ENST00000481502 RSAD1Q9HA92 442 aa8.93□□□□□ -0.98
SYNE1-225ENST00000481502 PDE11AQ9HCR9 933 aa8.93□□□□□ -0.98
SYNE1-225ENST00000481502 SNTG2Q9NY99 539 aa8.93□□□□□ -0.98
SYNE1-225ENST00000481502 IMPACTQ9P2X3 320 aa8.93□□□□□ -0.98
SYNE1-225ENST00000481502 MYO6Q9UM54 1294 aa8.93□□□□□ -0.98
SYNE1-225ENST00000481502 R3HCC1Q9Y3T6 440 aaKnown RBP8.93□□□□□ -0.98
SYNE1-225ENST00000481502 PCDHB7Q9Y5E2 793 aa8.93□□□□□ -0.98
SYNE1-225ENST00000481502 TANC1Q9C0D5 1861 aa8.93□□□□□ -0.98
SYNE1-225ENST00000481502 TTC3P53804 2025 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 UMODL1Q5DID0 1318 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 SMIM28A0A1B0GU29 152 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 ARHGEF37A1IGU5 675 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 GOLGA6L6A8MZA4 724 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 MGEA5O60502 916 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 FGBP02675 491 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 AMHP03971 560 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 CXCL8P10145 99 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 DLATP10515 647 aaKnown RBP8.92□□□□□ -0.98
SYNE1-225ENST00000481502 HARSP12081 509 aaKnown RBP8.92□□□□□ -0.98
SYNE1-225ENST00000481502 CSF2RAP15509 400 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 ATF7P17544 494 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-225ENST00000481502 PBX1P40424 430 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 TNFSF9P41273 254 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 RGS19P49795 217 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 ZNF75DP51815 510 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 RBP5P82980 135 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 UBXN1Q04323 297 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 PPP3CAQ08209 521 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 GRIK3Q13003 919 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 TMEM132DQ14C87 1099 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 EXOC3L4Q17RC7 722 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 SGSM1Q2NKQ1 1148 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 EPC2Q52LR7 807 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 DCAF17Q5H9S7 520 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-225ENST00000481502 C1orf220Q5T0J3 134 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 SPECC1LQ69YQ0 1117 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 AGMOQ6ZNB7 445 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 TRAPPC11Q7Z392 1133 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 CDR2LQ86X02 465 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-225ENST00000481502 CREBRFQ8IUR6 639 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 LRRC52Q8N7C0 313 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 CEP120Q8N960 986 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 EHBP1Q8NDI1 1231 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 SPATA18Q8TC71 538 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 PLEKHO2Q8TD55 490 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 TOP1MTQ969P6 601 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 CCDC127Q96BQ5 260 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 EEF2KMTQ96G04 330 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 NAP1L5Q96NT1 182 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-225ENST00000481502 RPS6KC1Q96S38 1066 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 LBHD1Q9BQE6 289 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-225ENST00000481502 IMPG2Q9BZV3 1241 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 XPO4Q9C0E2 1151 aaKnown RBP8.92□□□□□ -0.98
SYNE1-225ENST00000481502 VPS16Q9H269 839 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 NXF3Q9H4D5 531 aaKnown RBP8.92□□□□□ -0.98
SYNE1-225ENST00000481502 PRDM5Q9NQX1 630 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-225ENST00000481502 RAB20Q9NX57 234 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 IFNKQ9P0W0 207 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 STK39Q9UEW8 545 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 PARP2Q9UGN5 583 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 LRFN2Q9ULH4 789 aa8.92□□□□□ -0.98
SYNE1-225ENST00000481502 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.91□□□□□ -0.98
SYNE1-225ENST00000481502 A0A1W2PQJ5 194 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 ARL5CA6NH57 179 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 OFD1O75665 1012 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 ADCY5O95622 1261 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 TPM1P09493 284 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 P4HA1P13674 534 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 TBXAS1P24557 533 aaPredicted RBP8.91□□□□□ -0.98
SYNE1-225ENST00000481502 ITGB8P26012 769 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 KCNJ6P48051 423 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 GCNT1Q02742 428 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 MYO1EQ12965 1108 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 WDR44Q5JSH3 913 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 ZBTB41Q5SVQ8 909 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 JADE1Q6IE81 842 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 DPH6Q7L8W6 267 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 VSTM4Q8IW00 320 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 ABI1Q8IZP0 508 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 GSTCDQ8NEC7 633 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 ZSWIM2Q8NEG5 633 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 LMO3Q8TAP4 145 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 URGCPQ8TCY9 931 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 HERVK_113Q902F9 699 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 DPF3Q92784 378 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 VWCEQ96DN2 955 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 KIF12Q96FN5 646 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 PDLIM2Q96JY6 352 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 PPP1R10Q96QC0 940 aaKnown RBP8.91□□□□□ -0.98
SYNE1-225ENST00000481502 OSBPL7Q9BZF2 842 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 TAB2Q9NYJ8 693 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 SIK3Q9Y2K2 1263 aa8.91□□□□□ -0.98
SYNE1-225ENST00000481502 CITO14578 2027 aa8.9□□□□□ -0.98
SYNE1-225ENST00000481502 ANO9A1A5B4 782 aa8.9□□□□□ -0.98
SYNE1-225ENST00000481502 TMEM189-UBE2V1I3L0A0 370 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms