RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 PRSS38A1L453 326 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 LRRC14BA6NHZ5 514 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 PLOD2O00469 737 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 THAP12O43422 761 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 MYO1BO43795 1136 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 GUCA1CO95843 209 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 CHGBP05060 677 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 ANXA2P07355 339 aaKnown RBP8.91□□□□□ -0.98
LSM5-210ENST00000480956 NPR1P16066 1061 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 PAMP19021 973 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 LIMK1P53667 647 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 LGALS4P56470 323 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 RBP5P82980 135 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 TFCP2Q12800 502 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 SNAPC2Q13487 334 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 TMEM132BQ14DG7 1078 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 TAF7Q15545 349 aaPredicted RBP8.91□□□□□ -0.98
LSM5-210ENST00000480956 TREML4Q6UXN2 200 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 UBE3DQ7Z6J8 389 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 SLC44A2Q8IWA5 706 aaPredicted RBP8.91□□□□□ -0.98
LSM5-210ENST00000480956 NPAS3Q8IXF0 933 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 SPC24Q8NBT2 197 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 GSDMBQ8TAX9 411 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 SPATA18Q8TC71 538 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 UTP15Q8TED0 518 aaKnown RBP8.91□□□□□ -0.98
LSM5-210ENST00000480956 RNF141Q8WVD5 230 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 ABHD17AQ96GS6 310 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 C16orf92Q96LL3 132 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 LPIN3Q9BQK8 851 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 HGH1Q9BTY7 390 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 EPS8L2Q9H6S3 715 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 NECTIN3Q9NQS3 549 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 NDFIP2Q9NV92 336 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 STK32BQ9NY57 414 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 RABL2AQ9UBK7 228 aaPredicted RBP8.91□□□□□ -0.98
LSM5-210ENST00000480956 CPA4Q9UI42 421 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 NAGPAQ9UK23 515 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 TMPRSS2O15393 492 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 GJB3O75712 270 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 BEST1O76090 585 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 PGM3O95394 542 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 SRGAP2BP0DMP2 458 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 VSIG8P0DPA2 414 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 ALAS1P13196 640 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 IFNGR1P15260 489 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 RXRAP19793 462 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 ACSL1P33121 698 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 ARL3P36405 182 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 ALDH3A2P51648 485 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 PRKAA2P54646 552 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 POLE2P56282 527 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 NLRP5P59047 1200 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 BFSP1Q12934 665 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 MAMLD1Q13495 774 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 SEMA3AQ14563 771 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 SEC23AQ15436 765 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 C3orf38Q5JPI3 329 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 CATSPERGQ6ZRH7 1159 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 ARMC8Q8IUR7 673 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 CCDC117Q8IWD4 279 aaPredicted RBP8.9□□□□□ -0.98
LSM5-210ENST00000480956 SRBD1Q8N5C6 995 aaKnown RBP8.9□□□□□ -0.98
LSM5-210ENST00000480956 MOSPD2Q8NHP6 518 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 RNF125Q96EQ8 232 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 CEP95Q96GE4 821 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 CCDC43Q96MW1 224 aaKnown RBP8.9□□□□□ -0.98
LSM5-210ENST00000480956 FNBP1Q96RU3 617 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 TRIM6Q9C030 488 aaPredicted RBP8.9□□□□□ -0.98
LSM5-210ENST00000480956 NUCKS1Q9H1E3 243 aaKnown RBP8.9□□□□□ -0.98
LSM5-210ENST00000480956 RABEP2Q9H5N1 569 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 CNNM1Q9NRU3 951 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 CHST7Q9NS84 486 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 SACM1LQ9NTJ5 587 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 SLC6A14Q9UN76 642 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 HDAC5Q9UQL6 1122 aa8.9□□□□□ -0.98
LSM5-210ENST00000480956 SYNGAP1Q96PV0 1343 aa8.9□□□□□ -0.99
LSM5-210ENST00000480956 UBE2CO00762 179 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 ASNA1O43681 348 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 SIGLEC6O43699 453 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 SLU7O95391 586 aaKnown RBP8.89□□□□□ -0.99
LSM5-210ENST00000480956 NDST3O95803 873 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 GNAT1P11488 350 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 ACTR2P61160 394 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 PPA1Q15181 289 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 NR0B2Q15466 257 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 ZBTB41Q5SVQ8 909 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 RIPOR1Q6ZS17 1223 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 SLFN11Q7Z7L1 901 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 NME9Q86XW9 330 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 TAGAPQ8N103 731 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 LRRC71Q8N4P6 559 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 MFSD2AQ8NA29 543 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 DPF2Q92785 391 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 MAML3Q96JK9 1138 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 SNX22Q96L94 193 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 YTHDC1Q96MU7 727 aaKnown RBP8.89□□□□□ -0.99
LSM5-210ENST00000480956 NOX5Q96PH1 765 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 TWNKQ96RR1 684 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 C7orf25Q9BPX7 421 aa8.89□□□□□ -0.99
LSM5-210ENST00000480956 DDX23Q9BUQ8 820 aaKnown RBP8.89□□□□□ -0.99
LSM5-210ENST00000480956 PDCL3Q9H2J4 239 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms