RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 CCDC13Q8IYE1 715 aa18.02■□□□□ 0.48
SH3D21-203ENST00000480549 PPM1KQ8N3J5 372 aa18.02■□□□□ 0.48
SH3D21-203ENST00000480549 ZBTB45Q96K62 511 aaPredicted RBP18.02■□□□□ 0.48
SH3D21-203ENST00000480549 TMEM134Q9H6X4 195 aa18.02■□□□□ 0.48
SH3D21-203ENST00000480549 KIAA1586Q9HCI6 787 aa18.02■□□□□ 0.48
SH3D21-203ENST00000480549 GOLGA6BA6NDN3 693 aa18.02■□□□□ 0.48
SH3D21-203ENST00000480549 ZBTB48P10074 688 aaPredicted RBP18.02■□□□□ 0.48
SH3D21-203ENST00000480549 PRPF4BQ13523 1007 aaKnown RBP18.02■□□□□ 0.48
SH3D21-203ENST00000480549 FAM84AQ96KN4 292 aa18.02■□□□□ 0.48
SH3D21-203ENST00000480549 FAM167AQ96KS9 214 aa18.02■□□□□ 0.48
SH3D21-203ENST00000480549 AZI2Q9H6S1 392 aa18.02■□□□□ 0.48
SH3D21-203ENST00000480549 NOCTQ9UK39 431 aaKnown RBP18.02■□□□□ 0.48
SH3D21-203ENST00000480549 PPME1Q9Y570 386 aa18.02■□□□□ 0.48
SH3D21-203ENST00000480549 SNUPNO95149 360 aaKnown RBP18.01■□□□□ 0.47
SH3D21-203ENST00000480549 PSMD6Q15008 389 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 CCDC181Q5TID7 509 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 COPS5Q92905 334 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 RNF14Q9UBS8 474 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 AGO2Q9UKV8 859 aaKnown RBP18.01■□□□□ 0.47
SH3D21-203ENST00000480549 ADCY3O60266 1144 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 RASSF9O75901 435 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 MARK3P27448 753 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 MKRN4PQ13434 485 aaPredicted RBP18.01■□□□□ 0.47
SH3D21-203ENST00000480549 SPDYE1Q8NFV5 336 aaPredicted RBP18.01■□□□□ 0.47
SH3D21-203ENST00000480549 EPS8L1Q8TE68 723 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 MS4A4AQ96JQ5 239 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 CCDC114Q96M63 670 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 TARS2Q9BW92 718 aaKnown RBP18.01■□□□□ 0.47
SH3D21-203ENST00000480549 PDGFCQ9NRA1 345 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 PNMA3Q9UL41 463 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 STXBP5LQ9Y2K9 1186 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 ADGRA2Q96PE1 1338 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 KIAA0391O15091 583 aaKnown RBP18.01■□□□□ 0.47
SH3D21-203ENST00000480549 KIF4AO95239 1232 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 SGPL1O95470 568 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 CHRNB2P17787 502 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 DNA2P51530 1060 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 MFAP3P55082 362 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 PLPPR4Q7Z2D5 763 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 PARP9Q8IXQ6 854 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 GLG1Q92896 1179 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 ELMO3Q96BJ8 720 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 ARHGEF26Q96DR7 871 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 OSGEPQ9NPF4 335 aa18.01■□□□□ 0.47
SH3D21-203ENST00000480549 PAFAH1B1P43034 410 aa18■□□□□ 0.47
SH3D21-203ENST00000480549 ACOT2P49753 483 aa18■□□□□ 0.47
SH3D21-203ENST00000480549 ATP1A2P50993 1020 aa18■□□□□ 0.47
SH3D21-203ENST00000480549 CFAP221Q4G0U5 840 aa18■□□□□ 0.47
SH3D21-203ENST00000480549 MAP1SQ66K74 1059 aaPredicted RBP18■□□□□ 0.47
SH3D21-203ENST00000480549 NOP9Q86U38 636 aaKnown RBP18■□□□□ 0.47
SH3D21-203ENST00000480549 PRPF31Q8WWY3 499 aaKnown RBP18■□□□□ 0.47
SH3D21-203ENST00000480549 RFFLQ8WZ73 363 aa18■□□□□ 0.47
SH3D21-203ENST00000480549 SPATA33Q96N06 139 aa18■□□□□ 0.47
SH3D21-203ENST00000480549 NT5C1BQ96P26 610 aa18■□□□□ 0.47
SH3D21-203ENST00000480549 PTPRJQ12913 1337 aa18■□□□□ 0.47
SH3D21-203ENST00000480549 UNCXA6NJT0 531 aa18■□□□□ 0.47
SH3D21-203ENST00000480549 NOP56O00567 594 aaKnown RBP18■□□□□ 0.47
SH3D21-203ENST00000480549 IFT88Q13099 833 aa18■□□□□ 0.47
SH3D21-203ENST00000480549 PLCB4Q15147 1175 aa18■□□□□ 0.47
SH3D21-203ENST00000480549 FAM228AQ86W67 206 aa18■□□□□ 0.47
SH3D21-203ENST00000480549 RPUSD2Q8IZ73 545 aaKnown RBP18■□□□□ 0.47
SH3D21-203ENST00000480549 SLC35G2Q8TBE7 412 aa18■□□□□ 0.47
SH3D21-203ENST00000480549 ATP8B4Q8TF62 1192 aa18■□□□□ 0.47
SH3D21-203ENST00000480549 THAP2Q9H0W7 228 aa18■□□□□ 0.47
SH3D21-203ENST00000480549 ZNF408Q9H9D4 720 aa18■□□□□ 0.47
SH3D21-203ENST00000480549 SEPT11Q9NVA2 429 aaKnown RBP18■□□□□ 0.47
SH3D21-203ENST00000480549 RPS6KL1Q9Y6S9 549 aa18■□□□□ 0.47
SH3D21-203ENST00000480549 A0A0B4J269 797 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 IGKV6-21A0A0C4DH24 114 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 CES2O00748 559 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 CYP26A1O43174 497 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 ABCB4P21439 1286 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 RPS6KA1Q15418 735 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 GPR162Q16538 588 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 ZBTB41Q5SVQ8 909 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 SLFN12LQ6IEE8 588 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 TLDC1Q6P9B6 456 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 GTF3C2Q8WUA4 911 aaPredicted RBP17.99■□□□□ 0.47
SH3D21-203ENST00000480549 PCDHB18PQ96TA0 734 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 ISCUQ9H1K1 167 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 ACP6Q9NPH0 428 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 RBM12Q9NTZ6 932 aaKnown RBP17.99■□□□□ 0.47
SH3D21-203ENST00000480549 ANKRD62A6NC57 917 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 TTLL13PA6NNM8 815 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 TXNP10599 105 aaKnown RBP17.99■□□□□ 0.47
SH3D21-203ENST00000480549 MICALCLQ6ZW33 695 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 SLC47A2Q86VL8 602 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 LMBR1Q8WVP7 490 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 CTNNBL1Q8WYA6 563 aaPredicted RBP17.99■□□□□ 0.47
SH3D21-203ENST00000480549 LRRC1Q9BTT6 524 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 CCDC113Q9H0I3 377 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 PDHXO00330 501 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 IER5Q5VY09 327 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 LMBRD2Q68DH5 695 aaPredicted RBP17.99■□□□□ 0.47
SH3D21-203ENST00000480549 CDCA2Q69YH5 1023 aaPredicted RBP17.99■□□□□ 0.47
SH3D21-203ENST00000480549 GPRC5AQ8NFJ5 357 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 PI4K2AQ9BTU6 479 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 SELENOOQ9BVL4 669 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 CLEC11AQ9Y240 323 aa17.99■□□□□ 0.47
SH3D21-203ENST00000480549 FAM170AA1A519 330 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms